Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for stxbp5a

Gene Name Gene ID Reads Annotation
stxbp5a ENSDARG00000002656 318 syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]










Genes with expression patterns similar to stxbp5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stxbp5a ENSDARG00000002656 318 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
2. slc1a2b ENSDARG00000102453 3136 3.23 0.702 0.818 - - - 0.778 0.932 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
3. scrt2 ENSDARG00000056175 4331 3.204 0.720 0.736 - - - 0.793 0.955 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
4. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.111 0.752 0.715 - - - 0.776 0.868 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
5. nptx1l ENSDARG00000074671 569 2.985 0.711 0.758 - - - 0.739 0.777 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
6. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.515 0.743 - - - - 0.853 0.919 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
7. TUSC5 TUSC5 1436 2.508 0.796 - - - - 0.773 0.939 - -
8. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.501 - 0.796 - - - 0.881 0.824 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
9. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 2.489 0.786 - - - - 0.753 0.950 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
10. kcnc3a ENSDARG00000055855 1821 2.485 - 0.834 - - - 0.756 0.895 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
11. cers6 ENSDARG00000053583 247 2.482 0.906 - - - - 0.792 0.784 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
12. NTRK3 NTRK3 163 2.466 0.875 0.733 - - - - 0.858 - -
13. CR847998.1 ENSDARG00000104784 518 2.459 0.813 - - - - 0.762 0.884 - -
14. ZFHX3 ENSDARG00000103057 7759 2.449 0.782 - - - - 0.814 0.853 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
15. si:ch211-152f6.6 si:ch211-152f6.6 278 2.433 - 0.732 0.740 - - - 0.961 - -
16. tuba2 ENSDARG00000045014 1490 2.43 0.746 - - - - 0.805 0.879 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
17. LINGO2 LINGO2 300 2.421 - - 0.833 - - 0.705 0.883 - -
18. stx1b ENSDARG00000000503 2724 2.42 - 0.712 - - - 0.796 0.912 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
19. kif1ab ENSDARG00000062024 794 2.412 0.825 - - - - 0.828 0.759 - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
20. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.411 0.792 - - - - 0.705 0.914 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
21. mapk12b ENSDARG00000006409 2246 2.411 0.711 - - - - 0.804 0.896 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
22. nebl ENSDARG00000021200 40 2.407 0.816 0.733 - - - - 0.858 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
23. ptpn5 ENSDARG00000074866 548 2.398 0.759 - - - - 0.750 0.889 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
24. amph ENSDARG00000007663 599 2.396 - 0.733 - - - 0.725 0.938 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
25. stmn4l ENSDARG00000043932 654 2.396 0.754 - - - - 0.723 0.919 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
26. CHL1 CHL1 1553 2.381 0.704 - - - - 0.788 0.889 - -
27. lhx5 ENSDARG00000057936 785 2.38 0.759 - - - - 0.795 0.826 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
28. tecrl2 tecrl2 11 2.377 0.786 0.733 - - - - 0.858 - -
29. si:dkey-122c11.4 si:dkey-122c11.4 13 2.377 0.786 0.733 - - - - 0.858 - -
30. stmn1b ENSDARG00000033655 9491 2.373 0.717 - - - - 0.780 0.876 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
31. gap43 ENSDARG00000099744 4114 2.373 0.703 - - - - 0.815 0.855 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
32. msi1 ENSDARG00000010710 2634 2.37 0.734 - - - - 0.774 0.862 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
33. pnoca ENSDARG00000025024 467 2.367 0.724 - - - - 0.735 0.908 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
34. pcdh1gc5 ENSDARG00000104826 10052 2.366 0.731 - - - - 0.827 0.808 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
35. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.365 0.760 - - - - 0.770 0.835 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
36. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.36 - 0.723 - - - 0.801 0.836 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
37. AGO1 ENSDARG00000092644 4521 2.347 0.740 - - - - 0.709 0.898 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
38. syt11a ENSDARG00000057913 1145 2.34 - 0.705 - - - 0.836 0.799 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
39. SV2B SV2B 208 2.338 - 0.733 - - - 0.760 0.845 - -
40. ttll7 ENSDARG00000062973 519 2.336 0.744 - - - - 0.778 0.814 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
41. sez6l2 ENSDARG00000076052 360 2.335 - 0.708 - - - 0.778 0.849 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
42. vgf ENSDARG00000105529 247 2.321 0.726 - - - - 0.781 0.814 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
43. neflb ENSDARG00000012426 298 2.314 - 0.733 - - - 0.748 0.833 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
44. nkx1.2lb ENSDARG00000099427 220 2.306 - 0.705 - - - 0.726 0.875 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
45. cldn19 ENSDARG00000044569 281 2.304 0.856 - - - - 0.714 0.734 - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
46. tmem178 ENSDARG00000020758 77 2.303 0.747 - 0.783 - - 0.773 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
47. slc1a3a ENSDARG00000104431 9888 2.3 0.715 - - - - 0.796 0.789 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
48. gng3 ENSDARG00000009553 2530 2.296 0.719 0.737 - - - - 0.840 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
49. lingo1a ENSDARG00000034165 179 2.294 - 0.733 - - - 0.705 0.856 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
50. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 2.291 0.706 0.733 - - - 0.852 - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
51. dnajc5aa ENSDARG00000042948 2885 2.29 0.704 - - - - 0.710 0.876 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
52. LRFN2 118 2.288 - 0.704 - - - 0.782 0.802 - - leucine rich repeat and fibronectin type III domain containing 2
53. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.287 0.703 - - - - 0.819 0.765 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
54. CU914780.1 ENSDARG00000114023 105 2.285 0.808 0.733 - - - - 0.744 - -
55. KCNS3 KCNS3 82 2.256 - 0.733 - - - 0.737 0.786 - -
56. penka ENSDARG00000004869 161 2.251 0.724 0.740 - - - - 0.787 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
57. st8sia1_1 ENSDARG00000098221 16 2.244 0.771 0.733 - - - - 0.740 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
58. adam23a ENSDARG00000062323 580 2.23 0.750 - - - - 0.739 0.741 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
59. KCNAB2 KCNAB2 129 2.214 - 0.733 - - - 0.714 0.767 - -
60. MAP6 MAP6 643 2.208 - 0.709 - - - 0.733 0.766 - -
61. rap2ip rap2ip 681 2.2 0.715 0.708 - - - - 0.777 - -
62. RASGRF2 RASGRF2 644 2.176 - 0.727 - - - 0.747 0.702 - -
63. SAMD14 145 1.796 0.918 - - - - - 0.878 - - sterile alpha motif domain containing 14, transcript variant X3
64. SEZ6 SEZ6 262 1.772 - - - - - 0.809 0.963 - -
65. rgs20 ENSDARG00000038859 331 1.765 - - - - - 0.846 0.919 - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
66. fez1 ENSDARG00000023174 701 1.756 - - - - - 0.802 0.954 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
67. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.755 0.895 - - - - - 0.860 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
68. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.754 - - - - - 0.881 0.873 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
69. scn8aa ENSDARG00000005775 792 1.752 - - - - - 0.798 0.954 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
70. lrrn3 lrrn3 137 1.748 - - - - - 0.821 0.927 - -
71. FRRS1L ENSDARG00000103940 224 1.746 - 0.829 - - - - 0.917 - - ferric-chelate reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-120827-1]
72. nova1 ENSDARG00000020178 4129 1.744 - - - - - 0.809 0.935 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
73. MAP1A MAP1A 847 1.738 - - - - - 0.815 0.923 - -
74. adam11 ENSDARG00000079204 298 1.738 0.774 - - - - - 0.964 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
75. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.736 - - - - - 0.796 0.940 - -
76. nr4a2a ENSDARG00000017007 140 1.733 0.884 - - - - - 0.849 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
77. otpa ENSDARG00000014201 2290 1.731 - - - - - 0.806 0.925 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
78. sh3gl2 sh3gl2 1305 1.725 - - - - - 0.812 0.913 - -
79. olfm1b ENSDARG00000014053 1392 1.725 - - - - - 0.794 0.931 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
80. gabra5 ENSDARG00000070730 156 1.724 0.828 - - - - - 0.896 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
81. FGFBP3 FGFBP3 993 1.724 0.786 - - - - - 0.938 - -
82. ROBO3_1 ROBO3_1 468 1.722 - - - - - 0.798 0.924 - -
83. chrna2b ENSDARG00000057025 217 1.72 0.811 - - - - - 0.909 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
84. cadm3 ENSDARG00000057013 1545 1.716 - - - - - 0.827 0.889 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
85. STMN3 ENSDARG00000038465 1009 1.712 - - - - - 0.801 0.911 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
86. slc8a4a ENSDARG00000055154 90 1.712 0.755 - - - - - 0.957 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
87. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.708 - - - - - 0.794 0.914 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
88. GRM8_1 GRM8_1 85 1.707 0.786 - - - - - 0.921 - -
89. rab3ab ENSDARG00000043835 1267 1.706 - - - - - 0.816 0.890 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
90. pax3a ENSDARG00000010192 626 1.703 - - - - - 0.784 0.919 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
91. spock2 ENSDARG00000075393 791 1.703 - - - - - 0.829 0.874 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
92. slc32a1 ENSDARG00000059775 1092 1.702 - - - - - 0.782 0.920 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
93. BX957337.1 BX957337.1 1685 1.701 - - - - - 0.831 0.870 - -
94. sncgb ENSDARG00000109715 1014 1.7 - - - - - 0.819 0.881 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
95. lrrtm1 ENSDARG00000052713 1041 1.696 0.805 - - - - - 0.891 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
96. stmn2b ENSDARG00000070537 1586 1.695 - - - - - 0.805 0.890 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
97. tuba1c ENSDARG00000055216 8384 1.695 - - - - - 0.822 0.873 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
98. si:dkey-238f9.1 ENSDARG00000079446 51 1.695 0.753 - - - - - 0.942 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
99. RPH3A RPH3A 309 1.695 - - - - - 0.730 0.965 - -
100. rnf165a ENSDARG00000077906 133 1.69 0.748 - - - - - 0.942 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]

There are 2083 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA