Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for stx1b

Gene Name Gene ID Reads Annotation
stx1b ENSDARG00000000503 2724 syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]










Genes with expression patterns similar to stx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stx1b ENSDARG00000000503 2724 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
2. nadl1.1 1200 4.635 0.925 0.948 - - - 0.919 0.954 0.889 - neural adhesion molecule L1.1, transcript variant X1
3. slc1a2b ENSDARG00000102453 3136 4.565 0.945 0.835 - - - 0.956 0.969 0.860 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
4. cadm3 ENSDARG00000057013 1545 4.44 0.840 0.809 - - - 0.978 0.962 0.851 - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
5. BX957337.1 BX957337.1 1685 4.402 0.911 0.712 - - - 0.923 0.983 0.873 -
6. sypa ENSDARG00000042974, ENSDARG00000110528 3217 4.327 0.950 - - - - 0.937 0.991 0.749 0.700 synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
7. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 4.313 0.830 0.862 - 0.734 - 0.902 0.985 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
8. lhx1a ENSDARG00000014018 958 4.211 0.790 0.814 - 0.716 - 0.933 0.958 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
9. sox19b ENSDARG00000040266 532 4.185 0.863 0.704 - - - 0.811 0.915 0.892 - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
10. vamp2 ENSDARG00000056877 2158 4.126 0.889 0.761 0.757 - - 0.842 - 0.877 - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
11. tnika ENSDARG00000056218 728 4.089 0.802 0.833 - - - 0.733 0.844 0.877 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
12. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 4.052 0.786 0.708 0.707 - - 0.961 0.890 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
13. scn8aa ENSDARG00000005775 792 3.841 0.931 0.978 - - - 0.971 0.961 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
14. snap25a ENSDARG00000020609 4537 3.753 0.936 0.881 - - - 0.970 0.966 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
15. pcsk1nl ENSDARG00000076170 1232 3.74 0.936 0.978 - - - 0.859 0.967 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
16. amph ENSDARG00000007663 599 3.733 0.892 0.918 - - - 0.939 0.984 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
17. nova2 ENSDARG00000017673 7685 3.712 0.888 0.904 - - - 0.969 0.951 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
18. SV2B SV2B 208 3.705 0.904 0.918 - - - 0.921 0.962 - -
19. TUBB8P7_1 TUBB8P7_1 2722 3.702 0.964 0.810 - - - 0.976 0.952 - -
20. syt11a ENSDARG00000057913 1145 3.7 0.944 0.948 - - - 0.882 0.926 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
21. slc18a3a ENSDARG00000006356 1285 3.697 0.862 0.909 - - - 0.947 0.979 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
22. scrt2 ENSDARG00000056175 4331 3.692 0.845 0.911 - - - 0.969 0.967 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
23. MAP1A MAP1A 847 3.687 0.911 0.870 - - - 0.945 0.961 - -
24. slc32a1 ENSDARG00000059775 1092 3.658 0.842 0.906 - - - 0.929 0.981 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
25. gng3 ENSDARG00000009553 2530 3.653 0.900 0.934 - - - 0.837 0.982 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
26. stmn2a ENSDARG00000033234 2272 3.645 0.926 0.858 - - - 0.885 0.976 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
27. pcdh1gc5 ENSDARG00000104826 10052 3.631 0.924 0.802 - - - 0.952 0.953 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
28. TUSC5 TUSC5 1436 3.625 0.891 0.885 - - - 0.877 0.972 - -
29. gap43 ENSDARG00000099744 4114 3.618 0.896 0.825 - - - 0.943 0.954 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
30. scn2b ENSDARG00000101713 796 3.616 0.922 0.918 - - - 0.810 0.966 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
31. si:ch73-21g5.7 ENSDARG00000093156 9412 3.597 0.907 0.890 - - - 0.828 0.972 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
32. rbfox3 rbfox3 1443 3.59 0.812 0.871 - - - 0.922 0.985 - -
33. myt1b ENSDARG00000102879 5411 3.585 0.878 0.817 - - - 0.949 0.941 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
34. CHL1 CHL1 1553 3.573 0.828 0.970 - - - 0.872 0.903 - -
35. SNAP91 ENSDARG00000098809 556 3.567 0.729 0.929 - - - 0.920 0.989 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
36. nes ENSDARG00000088805 2710 3.555 0.827 0.907 - - - 0.893 0.928 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
37. adam23a ENSDARG00000062323 580 3.551 0.800 0.920 - - - 0.945 0.886 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
38. mir10d-1 mir10d-1 860 3.544 0.856 0.874 - - - 0.866 0.948 - -
39. dpysl3 ENSDARG00000002587 4381 3.543 0.881 0.732 - - - 0.954 0.976 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
40. dbx2 2971 3.535 0.865 0.837 - - - 0.836 0.997 - - developing brain homeobox 2
41. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.529 0.909 0.853 - - - 0.825 0.942 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
42. atp6v0cb ENSDARG00000036577 3472 3.528 0.834 - - - - 0.939 0.972 - 0.783 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
43. zic4 ENSDARG00000031307 1228 3.526 0.876 0.921 - - - 0.915 0.814 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
44. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.517 0.828 0.779 - - - 0.935 0.975 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
45. kcnc3a ENSDARG00000055855 1821 3.514 0.811 0.738 - - - 0.972 0.993 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
46. rtn1b ENSDARG00000021143 1682 3.508 0.883 0.839 - - - 0.922 0.864 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
47. pax6a ENSDARG00000103379 3061 3.506 0.824 0.727 - - - 0.967 0.988 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
48. sh3gl2 sh3gl2 1305 3.505 0.876 - - - 0.706 0.960 0.963 - -
49. stmn2b ENSDARG00000070537 1586 3.503 0.935 0.742 - - - 0.952 0.874 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
50. STMN3 ENSDARG00000038465 1009 3.492 0.838 - - 0.732 - 0.926 0.996 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
51. slc1a3a ENSDARG00000104431 9888 3.488 0.915 0.751 - - - 0.952 0.870 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
52. neurog1 ENSDARG00000056130 3924 3.478 0.870 0.769 - - - 0.867 0.972 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
53. mapk12b ENSDARG00000006409 2246 3.471 0.760 0.876 - - - 0.855 0.980 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
54. vsnl1a ENSDARG00000023228 1584 3.468 0.714 0.933 - - - 0.911 0.910 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
55. dpysl5a ENSDARG00000011141 1827 3.468 0.817 0.798 - - - 0.860 0.993 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
56. syt4 ENSDARG00000036505 421 3.465 0.933 0.854 - - - 0.771 0.907 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
57. nrn1a ENSDARG00000071860 1311 3.434 0.827 0.782 - - - 0.911 0.914 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
58. jag1a ENSDARG00000030289 1275 3.433 0.752 0.880 - - - 0.871 0.930 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
59. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.425 0.783 0.907 - - - 0.802 0.933 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
60. cers6 ENSDARG00000053583 247 3.423 0.799 0.758 - - - 0.918 0.948 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
61. si:ch211-152f6.6 si:ch211-152f6.6 278 3.42 0.866 0.901 - - - 0.767 0.886 - -
62. calb1 ENSDARG00000031598 252 3.419 0.865 0.814 - - - 0.874 0.866 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
63. rap2ip rap2ip 681 3.412 0.770 0.815 - - - 0.905 0.922 - -
64. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.41 0.795 0.734 - - - 0.920 0.961 - -
65. CABZ01111990.1 CABZ01111990.1 4374 3.409 0.890 0.711 - - - 0.834 0.974 - -
66. SKOR2 SKOR2 1041 3.405 0.833 0.778 - - - 0.816 0.978 - -
67. atp2b3b ENSDARG00000023445 1424 3.396 0.836 0.846 - - - 0.837 0.877 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
68. hmgb3a ENSDARG00000056725 15668 3.388 0.835 - - - - 0.900 0.826 0.827 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
69. fzd3a ENSDARG00000021664 1958 3.377 0.905 - - - - 0.830 0.849 0.793 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
70. Sep-03 Sep-03 1124 3.375 0.791 - - - - 0.918 0.848 0.818 -
71. PRRT2 ENSDARG00000103588 913 3.37 0.726 - - - - 0.940 0.819 0.885 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
72. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 3.369 0.742 - - - - 0.903 0.834 0.890 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
73. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.364 0.769 0.850 - - - - 0.956 0.789 - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
74. syngr3a ENSDARG00000014871 405 3.36 0.815 0.781 - - - 0.852 0.912 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
75. AP3B2 1874 3.359 - 0.835 - - - 0.904 0.751 0.869 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
76. nrxn2a ENSDARG00000061454 291 3.357 0.865 0.845 - - - 0.751 0.896 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
77. cnrip1a ENSDARG00000091683 1491 3.356 0.794 0.821 - - - 0.761 0.980 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
78. pou4f1 ENSDARG00000005559 821 3.345 0.829 - - 0.700 - 0.840 0.976 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
79. TUBB2A TUBB2A 142 3.331 0.833 0.814 - - - 0.887 0.797 - -
80. CR848045.1 CR848045.1 459 3.329 0.864 0.814 - - - 0.702 0.949 - -
81. nptx1l ENSDARG00000074671 569 3.312 0.780 0.861 - - - 0.788 0.883 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
82. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.302 0.904 0.758 - - - 0.707 0.933 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
83. slc17a6b ENSDARG00000041150 823 3.302 - 0.814 - - - 0.836 0.949 0.703 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
84. SYT2 ENSDARG00000014169 265 3.295 0.850 0.828 - - - 0.848 0.769 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
85. atp1b2a ENSDARG00000099203 4010 3.27 0.875 0.755 - - - - 0.927 - 0.713 ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
86. nrxn3b ENSDARG00000062693 192 3.254 0.797 0.746 - - - 0.880 0.831 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
87. cacng3b ENSDARG00000076401 91 3.253 0.848 0.814 - - - 0.713 0.878 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
88. zic1 ENSDARG00000015567 2520 3.241 0.878 0.725 - - - 0.840 0.798 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
89. GJD2_1 GJD2_1 3045 3.237 0.730 0.814 - - - 0.765 0.928 - -
90. lgi1a ENSDARG00000020493 1218 3.233 0.738 0.779 - - - 0.933 0.783 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
91. atp1b4 ENSDARG00000053262 1337 3.219 0.809 0.701 - - - 0.896 0.813 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
92. ptprnb ENSDARG00000077047 2743 3.216 0.872 0.849 - - - 0.768 0.727 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
93. rufy3 ENSDARG00000029692 3031 3.205 0.795 0.722 - - - 0.844 0.844 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
94. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.204 0.874 0.706 - - - 0.873 0.751 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
95. CU928222.1 ENSDARG00000097436 1662 3.202 0.706 0.810 - - - 0.768 0.918 - -
96. ctnnd2b ENSDARG00000003779 964 3.201 0.749 0.726 - - - 0.787 0.939 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
97. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 3.188 0.806 0.827 - - - 0.846 0.709 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
98. cldn5a ENSDARG00000043716 3865 3.167 0.786 0.704 - - - 0.799 0.878 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
99. cacna2d3 ENSDARG00000078760 211 3.154 0.817 0.788 - - - 0.812 0.737 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
100. penka ENSDARG00000004869 161 3.123 0.783 0.831 - - - 0.762 0.747 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]

There are 2621 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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