Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for stub1

Gene Name Gene ID Reads Annotation
stub1 ENSDARG00000045228 105 STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]










Genes with expression patterns similar to stub1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stub1 ENSDARG00000045228 105 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
2. si:dkey-216e24.4 si:dkey-216e24.4 14 1.991 - - - - - 0.993 - - 0.998
3. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 1.935 - - - - 0.994 0.941 - - - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
4. CU570781.1 ENSDARG00000094656 49 1.929 - 0.943 - - - 0.986 - - -
5. si:ch211-181p13.2 ENSDARG00000096484 94 1.907 - - - 0.911 0.996 - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
6. aar2 ENSDARG00000018658 297 1.883 - - - - 0.977 0.906 - - - AAR2 splicing factor homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040704-68]
7. si:dkey-18j14.4 si:dkey-18j14.4 60 1.863 - - - 0.975 - 0.888 - - -
8. BX936371.1 BX936371.1 77 1.859 - 0.869 - - - 0.990 - - -
9. paf1 ENSDARG00000098432 1806 1.854 - - - - 0.960 0.894 - - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
10. C17H15orf41 C17H15orf41 313 1.796 - - - - 0.950 0.846 - - -
11. wbscr16 wbscr16 791 1.783 - - - - 0.964 0.819 - - -
12. utp18 ENSDARG00000102618 1983 1.759 - - - - 0.828 0.931 - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
13. JPH3 ENSDARG00000102204 283 1.757 - 0.770 - - 0.987 - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
14. TSG101 TSG101 1686 1.757 - - - - 0.939 0.818 - - -
15. dlg2 ENSDARG00000099323 162 1.753 - - - - 0.994 - - - 0.759 discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
16. sugp1 ENSDARG00000075936 826 1.734 - - - - 0.990 0.744 - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
17. crp4 714 1.732 - - - - 0.948 - - - 0.784 C-reactive protein 4
18. GTSE1 ENSDARG00000013719 1115 1.731 - - - - 0.948 0.783 - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
19. CR847543.1 ENSDARG00000086708 155 1.728 - 0.925 - 0.803 - - - - -
20. LPHN2 LPHN2 1971 1.728 - - - - 0.798 0.930 - - -
21. rab15 ENSDARG00000026484 326 1.703 - - - - - 0.781 - - 0.922 RAB15, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-2]
22. CU570681.1 CU570681.1 512 1.694 - - - - 0.976 0.718 - - -
23. cped1 ENSDARG00000045747 1024 1.691 - - 0.717 - 0.974 - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
24. TUBGCP6 1991 1.688 - - - - 0.937 0.751 - - - tubulin, gamma complex associated protein 6
25. ddx27 ENSDARG00000091831 1471 1.675 - - - - 0.940 0.735 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
26. C24H11orf54 C24H11orf54 719 1.672 - - - - 0.942 0.730 - - -
27. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.671 - - - - 0.943 0.728 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
28. si:dkeyp-98a7.1 100 1.669 - - - - - 0.965 - - 0.704 si:dkeyp-98a7.1
29. ercc5 ENSDARG00000023678 468 1.656 - 0.796 - - - 0.860 - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
30. necap2 ENSDARG00000046002 4372 1.642 - - - - 0.892 0.750 - - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
31. get4 ENSDARG00000024398 1818 1.639 - - - - 0.935 0.704 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
32. SLC22A31 ENSDARG00000078882 1474 1.625 - - - - 0.812 0.813 - - - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
33. si:ch211-194e15.5 ENSDARG00000061804 253 1.617 - - - 0.749 - 0.868 - - - si:ch211-194e15.5 [Source:ZFIN;Acc:ZDB-GENE-060503-393]
34. hamp2 hamp2 67 1.605 - 0.727 - - - 0.878 - - -
35. pitpnb ENSDARG00000036005 513 1.604 - 0.754 - - - 0.850 - - - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
36. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.582 - 0.727 - 0.855 - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
37. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 1.572 - 0.727 - - - 0.845 - - - toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
38. KCNJ3 KCNJ3 24 1.565 - 0.727 - 0.838 - - - - -
39. pgap1 ENSDARG00000062465 30 1.557 - 0.727 - 0.830 - - - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
40. ASPH ENSDARG00000055945 214 1.551 - 0.721 - - - 0.830 - - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
41. C9H21orf33 C9H21orf33 321 1.534 - - - 0.726 - 0.808 - - -
42. GTSF1L GTSF1L 2089 1.526 - - - - 0.820 0.706 - - -
43. ccr12.3 ccr12.3 79 1.519 - 0.727 - - - 0.792 - - -
44. myo1f ENSDARG00000078734 100 1.502 - 0.727 - - - - - - 0.775 myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
45. ercc8 ENSDARG00000069283, ENSDARG00000116263 546 1.477 - - 0.718 - - 0.759 - - - excision repair cross-complementation group 8 [Source:ZFIN;Acc:ZDB-GENE-041010-60]
46. LARP4 LARP4 48 1 - 1.000 - - - - - - -
47. si:dkey-37o8.1 ENSDARG00000071727 64 1 - - - - 1.000 - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
48. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - - - - 1.000 - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
49. si:dkey-20l4.2 si:dkey-20l4.2 110 0.999 - - - - 0.999 - - - -
50. zbtb20 ENSDARG00000005586 195 0.999 - - - - 0.999 - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
51. rereb ENSDARG00000075670 136 0.999 - - - - 0.999 - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
52. SLC35D3 ENSDARG00000107442 12 0.998 - - - - - - - - 0.998 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
53. mir301c 84 0.998 - - - - - - - - 0.998 microRNA 301c
54. CABZ01084323.1 ENSDARG00000104937 5 0.998 - - - - - - - - 0.998 protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
55. cth1 ENSDARG00000057328 13 0.998 - - - - - - - - 0.998 cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
56. RNaseP_nuc RNaseP_nuc 7 0.998 - - - - - - - - 0.998
57. osbpl1a ENSDARG00000105147 42 0.998 - - - - - 0.998 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
58. LRRC30 LRRC30 83 0.998 - - - - 0.998 - - - -
59. GRIN2B GRIN2B 140 0.998 - - - - 0.998 - - - -
60. si:dkey-22l1.1 ENSDARG00000096743 5 0.998 - - - - - - - - 0.998 si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
61. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 0.998 - - - - - - - - 0.998
62. pex12 ENSDARG00000035149 175 0.998 - - - - 0.998 - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
63. KEL ENSDARG00000076950 159 0.997 - - - - 0.997 - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
64. mis18a ENSDARG00000035333 555 0.997 - - - - 0.997 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
65. ENSDARG00000091313 ENSDARG00000091313 6 0.996 - - - - - - - - 0.996
66. CR626962.1 ENSDARG00000096981 220 0.995 - - - - 0.995 - - - -
67. ENSDARG00000086878 ENSDARG00000086878 332 0.995 - - - - 0.995 - - - -
68. si:dkey-178o8.2 si:dkey-178o8.2 15 0.995 - - - - - 0.995 - - -
69. etv1 ENSDARG00000101959 358 0.994 - - - - 0.994 - - - - ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
70. pigt ENSDARG00000075842 210 0.994 - - - - 0.994 - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
71. cep72 ENSDARG00000105258 344 0.994 - - - - 0.994 - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
72. TTF1_3 TTF1_3 215 0.994 - - - - 0.994 - - - -
73. ARHGEF38 ENSDARG00000079377 9 0.993 - - - - - 0.993 - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
74. CRP CRP 136 0.993 - - - - 0.993 - - - -
75. lyrm5b ENSDARG00000045827 91 0.993 - - - - - 0.993 - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
76. RBBP6_2 RBBP6_2 23 0.993 - - - - - 0.993 - - -
77. cx27.5 ENSDARG00000035553 12 0.993 - - - - - 0.993 - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
78. si:dkeyp-46h3.2 ENSDARG00000092498 23 0.993 - - - - - 0.993 - - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
79. pnocb ENSDARG00000024189 18 0.993 - - - - - 0.993 - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
80. rwdd2b ENSDARG00000055426 294 0.993 - - - - 0.993 - - - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
81. zgc:154040 16 0.993 - - - - - 0.993 - - - zgc:154040
82. hnf1a ENSDARG00000009470 60 0.993 - - - - - 0.993 - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
83. chia.3 ENSDARG00000009612 14 0.993 - - - - - 0.993 - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
84. si:dkey-239j18.3 ENSDARG00000089806 12918 0.992 - - - - - 0.992 - - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
85. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.992 - - - - 0.992 - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
86. TTF1_5 TTF1_5 705 0.992 - - - - 0.992 - - - -
87. BX571949.1 BX571949.1 293 0.992 - - - - 0.992 - - - -
88. DNAJC16_1 DNAJC16_1 245 0.992 - - - - 0.992 - - - -
89. zgc:136791 97 0.991 - - - - - 0.991 - - - zgc:136791, transcript variant X3
90. ralgps1 ENSDARG00000068370 39 0.991 - - - - - 0.991 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
91. myo7bb ENSDARG00000077201 7 0.991 - - - - - 0.991 - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
92. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.991 - - - - - 0.991 - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
93. CABZ01044346.1 CABZ01044346.1 12 0.991 - - - - - 0.991 - - -
94. tpi1a ENSDARG00000025012 562 0.991 - - - - 0.991 - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
95. cry2b cry2b 517 0.991 - - - - - 0.991 - - -
96. MTBP ENSDARG00000090447 174 0.991 - - - - 0.991 - - - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
97. alg10 ENSDARG00000053917 491 0.99 - - - - 0.990 - - - - asparagine-linked glycosylation 10 [Source:ZFIN;Acc:ZDB-GENE-110310-8]
98. MPZL2 MPZL2 31 0.99 - - - - - 0.990 - - -
99. wdfy2 ENSDARG00000040453 406 0.99 - - - - - 0.990 - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
100. ebp ENSDARG00000046098 502 0.989 - - - - 0.989 - - - - EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]

There are 1342 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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