Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for strn3

Gene Name Gene ID Reads Annotation
strn3 ENSDARG00000001729 4608 striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]










Genes with expression patterns similar to strn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. strn3 ENSDARG00000001729 4608 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
2. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 2.675 - 0.971 - - - - 0.723 - 0.981 PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
3. ptpn9a ENSDARG00000077495 2295 2.645 - 0.976 0.956 - - - 0.713 - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
4. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.935 - - 0.952 - - - - - 0.983 POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
5. rnf2 ENSDARG00000010381 3427 1.934 - 0.990 0.944 - - - - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
6. pank1b ENSDARG00000010098 3202 1.93 - 0.974 0.956 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
7. flot2a ENSDARG00000004830 5276 1.914 - 0.952 0.962 - - - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
8. slc1a5 ENSDARG00000099186 7580 1.901 - 0.982 0.919 - - - - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
9. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 1.891 - 0.980 0.911 - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
10. rab5c ENSDARG00000026712 4733 1.845 - 0.863 - - - - - - 0.982 RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
11. aqp3a ENSDARG00000003808 9044 1.834 - 0.952 0.882 - - - - - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
12. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.831 - 0.982 - - - - - - 0.849 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
13. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.811 - - - - 0.826 - - - 0.985 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
14. psmd14 ENSDARG00000063100 15711 1.809 - 0.972 0.837 - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
15. lrp12 ENSDARG00000098845 999 1.798 - - 0.955 - 0.843 - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
16. slc25a3b ENSDARG00000025566 32264 1.797 - - 0.882 - - - - - 0.915 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
17. amotl2a ENSDARG00000061923 4713 1.797 - - - - 0.815 - - - 0.982 angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
18. gng3 ENSDARG00000009553 2530 1.795 - - - - 0.811 - - - 0.984 guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
19. eif3ja ENSDARG00000012603 6324 1.79 - - 0.951 - 0.839 - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
20. eva1ba ENSDARG00000102701 1480 1.777 - - 0.946 - 0.831 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
21. mis18a ENSDARG00000035333 555 1.776 - 0.968 - - 0.808 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
22. gna12a ENSDARG00000025826 1769 1.775 - 0.983 - - 0.792 - - - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
23. tpi1a ENSDARG00000025012 562 1.768 - 0.968 - - 0.800 - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
24. C13H9orf72 C13H9orf72 2310 1.765 - - - - - - - 0.779 0.986
25. rtf1 ENSDARG00000008947 6596 1.763 - 0.957 - - 0.806 - - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
26. smg5 ENSDARG00000041481 1286 1.759 - - 0.954 - 0.805 - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
27. pacsin2 ENSDARG00000078014 1582 1.753 - 0.974 - - 0.779 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
28. tm2d3 ENSDARG00000076618 2310 1.753 - - 0.941 - 0.812 - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
29. acin1b ENSDARG00000026842 3806 1.748 - - - - - - 0.763 - 0.985 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
30. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.721 - - 0.959 - 0.762 - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
31. psma6a ENSDARG00000019398 2702 1.719 - 0.972 - - - 0.747 - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
32. setb ENSDARG00000003920 21788 1.716 - - - - - 0.771 - - 0.945 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
33. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.713 - - 0.945 - 0.768 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
34. rhogc ENSDARG00000028401 2671 1.71 - 0.766 0.944 - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
35. nnt ENSDARG00000023536 7357 1.705 - - - - - - 0.722 - 0.983 nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
36. samm50l ENSDARG00000039681 2465 1.701 - - 0.957 - - - 0.744 - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
37. ube2v2 ENSDARG00000028198 23341 1.7 - - - - - - 0.748 - 0.952 ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
38. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.7 - 0.970 - - 0.730 - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
39. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.699 - - 0.934 - 0.765 - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
40. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 1.697 - - 0.954 - - - - 0.743 - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
41. rgs12b ENSDARG00000036774 5088 1.697 - 0.963 - - - - 0.734 - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
42. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.694 - 0.896 - - - - - - 0.798 enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
43. ubr2 ENSDARG00000070164 3960 1.693 - - 0.958 - - 0.735 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
44. hsd17b14 ENSDARG00000054842 1394 1.692 - 0.965 - - - - - 0.727 - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
45. crot ENSDARG00000040352 701 1.686 - 0.972 - - - 0.714 - - - carnitine O-octanoyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-35]
46. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.686 - - 0.944 - - - 0.742 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
47. gdi1 ENSDARG00000056122 4106 1.685 - - 0.933 - 0.752 - - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
48. si:ch211-218c6.8 ENSDARG00000092364 1270 1.684 - 0.971 - - - - 0.713 - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
49. sdhb ENSDARG00000075768 5493 1.673 - 0.963 - - - - 0.710 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
50. znhit1 ENSDARG00000054574 979 1.673 - 0.963 - - - - 0.710 - - zinc finger, HIT-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-272]
51. mtpn ENSDARG00000104018 4264 1.67 - 0.968 - - - - 0.702 - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
52. atf4b2 atf4b2 4734 1.667 - 0.959 - - - - 0.708 - -
53. ptplb ptplb 6135 1.666 - - 0.916 - - - - 0.750 -
54. lpl ENSDARG00000087697 2578 1.666 - - 0.952 - 0.714 - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
55. cox7a3 20842 1.664 - 0.945 - 0.719 - - - - - cytochrome c oxidase subunit VIIa polypeptide 3
56. U1_25 U1_25 283 1.661 - - 0.953 0.708 - - - - -
57. pex14 ENSDARG00000028322 1087 1.66 - 0.950 - 0.710 - - - - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
58. LPHN2 LPHN2 1971 1.655 - - 0.946 - 0.709 - - - -
59. dek ENSDARG00000070108 2262 1.646 - - 0.879 - 0.767 - - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
60. atpif1a 6030 1.644 - 0.943 - - - - 0.701 - - ATPase inhibitory factor 1a
61. nop10 ENSDARG00000104227 2463 1.643 - - 0.881 - - - 0.762 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
62. max ENSDARG00000024844 6035 1.631 - - 0.888 - 0.743 - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
63. eng1a eng1a 484 1.626 - - - - 0.845 - - 0.781 -
64. tma7 ENSDARG00000071670 13372 1.623 - 0.859 - - - - 0.764 - - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
65. ptbp1a ENSDARG00000019362 6290 1.618 - - 0.893 - - - 0.725 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
66. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.615 - - - - 0.835 - - 0.780 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
67. ccne2 ENSDARG00000098529 4695 1.61 - - 0.896 - - - 0.714 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
68. mrps23 ENSDARG00000033973 2265 1.609 - - - - 0.904 - - 0.705 - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
69. crebbpa ENSDARG00000104609 1739 1.608 - - 0.881 - - - 0.727 - - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
70. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.608 - - - - - 0.751 - 0.857 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
71. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 1.606 - - - - 0.815 - - 0.791 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
72. gstm gstm 4064 1.605 - - 0.896 - - - 0.709 - -
73. tmem167a ENSDARG00000035914 3319 1.605 - - - - - - 0.882 0.723 - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
74. mycla ENSDARG00000006003 1866 1.597 - - - - 0.805 - - 0.792 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
75. utp23 ENSDARG00000105012 1346 1.593 - - - - 0.832 - - 0.761 - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
76. ube2f ENSDARG00000025754 1946 1.593 - - - - 0.842 - 0.751 - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
77. slc2a8 ENSDARG00000104278 764 1.589 - - - - 0.798 - - 0.791 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
78. HIPK1_1 HIPK1_1 8096 1.588 - 0.764 - - - - 0.824 - -
79. ubtfl ENSDARG00000038780 1252 1.573 - - - - 0.756 0.817 - - - upstream binding transcription factor, like [Source:ZFIN;Acc:ZDB-GENE-040426-1159]
80. wwtr1 ENSDARG00000067719 3484 1.569 - - - - 0.760 - 0.809 - - WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
81. wu:fb54a03 wu:fb54a03 1722 1.561 - - - - 0.799 - 0.762 - -
82. sult6b1 ENSDARG00000086826 2070 1.56 - - - - 0.803 - - 0.757 - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
83. PCBP4 ENSDARG00000024276 3194 1.557 - - - - 0.824 - - 0.733 - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
84. pafah1b1b ENSDARG00000026595 1822 1.555 - - - - 0.787 - - 0.768 - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:ZFIN;Acc:ZDB-GENE-040116-3]
85. prkacaa ENSDARG00000100349 2711 1.555 - - - - 0.824 - 0.731 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
86. get4 ENSDARG00000024398 1818 1.551 - - - - 0.841 0.710 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
87. mark2b ENSDARG00000032458 821 1.537 - - - - 0.804 - - 0.733 - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
88. rbm39b ENSDARG00000041853 1421 1.53 - - - - 0.790 - - 0.740 - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
89. ptenb ENSDARG00000056623 5783 1.529 - - - - - 0.734 0.795 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
90. PIK3CA_1 PIK3CA_1 4065 1.529 - - - - 0.804 - 0.725 - -
91. scaf4a ENSDARG00000077093 2408 1.527 - - - - 0.783 - 0.744 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
92. si:ch211-278j3.3 ENSDARG00000020284 478 1.524 - - - 0.715 0.809 - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
93. cpsf3 ENSDARG00000027649 6897 1.521 - - 0.792 - - 0.729 - - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
94. srsf4 ENSDARG00000105293 9657 1.519 - - 0.776 - - - 0.743 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
95. otub1b ENSDARG00000011462 4329 1.515 - - - - - 0.719 0.796 - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
96. C8H5orf51 C8H5orf51 1199 1.512 - - - - 0.779 - 0.733 - -
97. dbnla ENSDARG00000008170 2129 1.507 - - - - 0.733 - - 0.774 - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
98. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.506 - - - - 0.761 - 0.745 - - GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
99. dctd ENSDARG00000036990 2168 1.499 - - - - 0.760 - - 0.739 - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
100. tgfbi ENSDARG00000071586 17779 1.495 - - 0.787 - - - - - 0.708 transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]

There are 1415 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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