Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for stra6

Gene Name Gene ID Reads Annotation
stra6 ENSDARG00000051874, ENSDARG00000115031 1625 stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]










Genes with expression patterns similar to stra6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
2. c8a ENSDARG00000039516 495 4.586 0.813 0.854 - 0.799 - - 0.709 0.704 0.707 complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
3. dao.1 ENSDARG00000035602 11969 4.241 - - 0.838 0.806 - - 0.837 0.867 0.893 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
4. tfa ENSDARG00000016771 30517 4.16 - - 0.853 0.879 - - 0.787 0.780 0.861 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
5. atic ENSDARG00000016706 6032 4.13 - - - 0.742 - 0.916 0.861 0.800 0.811 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-011212-4]
6. serpina1l ENSDARG00000090850 10625 4.126 - - 0.820 0.863 - - 0.843 0.739 0.861 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
7. dmgdh ENSDARG00000025703 6088 4.119 - - 0.847 0.859 - 0.701 - 0.890 0.822 dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
8. apoa4 apoa4 84813 4.087 - - 0.846 0.743 - - 0.756 0.867 0.875
9. apobb apobb 258472 4.069 - - 0.791 0.829 - - 0.751 0.882 0.816
10. apom ENSDARG00000076838 4732 4.064 - - 0.860 0.842 - - 0.802 0.759 0.801 apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
11. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 4.016 - - 0.803 0.729 - - 0.869 0.812 0.803 spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
12. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 3.99 - - 0.809 0.816 - - 0.700 0.846 0.819 kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
13. apoa2 ENSDARG00000015866 297380 3.99 - - 0.858 0.705 - - 0.803 0.845 0.779 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
14. c3a c3a 6690 3.981 - 0.759 0.731 0.872 - - 0.854 0.765 -
15. zgc:161979_1 zgc:161979_1 206500 3.963 - - 0.764 0.846 - - 0.734 0.830 0.789
16. renbp ENSDARG00000008931 1848 3.937 - - 0.787 0.722 - - 0.784 0.828 0.816 renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
17. sid4 sid4 1358 3.916 - - 0.800 0.823 - - 0.815 0.734 0.744
18. sepp1b 1004 3.877 - - 0.738 0.796 - - 0.780 0.842 0.721 selenoprotein P, plasma, 1b
19. cry3_1 cry3_1 3347 3.861 - - 0.822 0.737 - - 0.757 0.728 0.817
20. miox ENSDARG00000002764 588 3.846 - - 0.742 0.793 - - 0.730 0.791 0.790 myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
21. nr0b2a ENSDARG00000044685 2508 3.434 - - 0.733 0.866 - 0.991 - - 0.844 nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
22. sb:cb37 ENSDARG00000041645 2018 3.4 - - 0.834 0.841 - - 0.884 0.841 - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
23. ctsla ENSDARG00000007836 67814 3.362 - - - 0.771 - - 0.875 0.841 0.875 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
24. APOB_1 APOB_1 2217 3.349 - - 0.837 0.802 - - - 0.869 0.841
25. fahd2a ENSDARG00000103759 9581 3.343 - - 0.780 - - - 0.924 0.817 0.822 fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
26. slc25a20 ENSDARG00000040401 9258 3.334 - - 0.772 0.846 - - - 0.880 0.836 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
27. CD68 CD68 4599 3.33 - - - 0.825 - - 0.832 0.825 0.848
28. gpx4a ENSDARG00000068478 10991 3.32 - - 0.776 - - - 0.884 0.781 0.879 glutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]
29. abca1b ENSDARG00000079009 14119 3.319 - - 0.771 0.910 - - - 0.779 0.859 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
30. rpia ENSDARG00000056640, ENSDARG00000110576 8288 3.309 - - 0.790 - - - 0.831 0.874 0.814 ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
31. creb3l3 creb3l3 1981 3.297 - - - 0.790 - - 0.828 0.827 0.852
32. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 3.294 - - 0.738 0.863 - - - 0.827 0.866 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
33. pvalb9 ENSDARG00000071601, ENSDARG00000113946 30137 3.292 - - 0.741 0.859 - - - 0.837 0.855 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
34. hao1 ENSDARG00000024160 6104 3.292 - - 0.851 0.836 - - - 0.817 0.788 hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
35. glula ENSDARG00000099776 14156 3.287 - - - 0.752 - - 0.858 0.854 0.823 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
36. fgb ENSDARG00000008969 11737 3.272 - - 0.789 0.803 - - - 0.828 0.852 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
37. aldob ENSDARG00000053684 30498 3.272 - - 0.834 0.891 - - - 0.836 0.711 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
38. fgg ENSDARG00000037281, ENSDARG00000114705 10817 3.262 - - 0.771 0.755 - - - 0.871 0.865 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
39. smpd2 smpd2 1792 3.253 - - - 0.888 - - 0.796 0.782 0.787
40. MPC2 ENSDARG00000024478 4194 3.252 - - - 0.777 - - 0.885 0.712 0.878 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
41. HPX ENSDARG00000012609 781 3.231 - - 0.817 0.846 - - - 0.782 0.786 hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
42. apoa1b ENSDARG00000101324 336817 3.205 - - 0.700 0.826 - - - 0.798 0.881 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
43. apoeb ENSDARG00000040295 229165 3.184 - - - 0.837 - - 0.754 0.788 0.805 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
44. zgc:152830 ENSDARG00000079932 12194 3.169 - - - 0.771 - - 0.871 0.786 0.741 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
45. SLC22A23 ENSDARG00000078856 2921 3.164 - - 0.783 0.786 - - 0.886 - 0.709 solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
46. psap ENSDARG00000013968 22919 3.16 - - 0.743 0.875 - - - 0.828 0.714 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
47. dgat2 ENSDARG00000018846 5032 3.155 - - 0.801 0.774 - - 0.739 - 0.841 diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
48. zgc:136410 ENSDARG00000102241 8433 3.151 - - - 0.845 - - 0.768 0.736 0.802 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
49. ambp ENSDARG00000004296, ENSDARG00000112731 1305 3.139 - - 0.730 - - - 0.867 0.751 0.791 alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
50. mthfd1b ENSDARG00000040492 3784 3.125 - - 0.823 0.770 - - 0.775 0.757 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
51. TM6SF2 ENSDARG00000029057 1239 3.12 - - 0.707 0.829 - - 0.754 0.830 - transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
52. sord ENSDARG00000053405 2406 3.118 - - 0.738 0.791 - - - 0.792 0.797 sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
53. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 3.101 - - 0.752 0.869 - - 0.706 - 0.774 regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
54. CPN2 CPN2 682 3.101 - - 0.786 0.735 - - 0.744 0.836 -
55. apoea ENSDARG00000102004 13212 3.098 - - 0.800 0.815 - - - 0.749 0.734 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
56. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 3.096 - - 0.749 0.732 - - 0.862 0.753 - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
57. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 3.094 - - 0.748 0.802 - - 0.804 - 0.740 glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
58. serpinf2b ENSDARG00000061383 3859 3.084 - - - 0.816 - - 0.823 0.713 0.732 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b [Source:ZFIN;Acc:ZDB-GENE-061215-114]
59. ucp2 ENSDARG00000043154 2921 3.076 - - 0.734 0.896 - - 0.719 - 0.727 uncoupling protein 2 [Source:ZFIN;Acc:ZDB-GENE-990708-8]
60. APOB APOB 33858 3.069 - - 0.704 0.798 - - 0.707 0.860 -
61. zgc:158374 zgc:158374 2227 3.051 - 0.749 0.725 0.854 - - - 0.723 -
62. apoc1l apoc1l 398664 3.007 - - - 0.721 - - 0.770 0.794 0.722
63. tcn2l tcn2l 2428 2.585 - - - - - - 0.902 0.831 0.852
64. vtnb ENSDARG00000053831 2364 2.581 - - - 0.815 - - 0.889 - 0.877 vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
65. pla2g12b ENSDARG00000015662 27239 2.574 - - - 0.895 - - - 0.850 0.829 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
66. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 2.569 - - 0.756 - - - 0.953 - 0.860 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
67. tkt tkt 7203 2.556 - - 0.741 0.859 - 0.956 - - -
68. C3_1 C3_1 637 2.515 - - 0.848 - - - 0.860 0.807 -
69. zgc:161979 zgc:161979 196746 2.501 - - - - - - 0.786 0.834 0.881
70. f7 ENSDARG00000034862 405 2.482 - 0.867 0.758 - - - - 0.857 - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
71. hmox1 hmox1 1391 2.482 - - 0.865 0.791 - - 0.826 - -
72. ppm1h ENSDARG00000063684 1446 2.48 - - - - - 0.995 0.771 0.714 - protein phosphatase, Mg2+/Mn2+ dependent, 1H [Source:ZFIN;Acc:ZDB-GENE-061027-190]
73. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 2.475 - - - 0.896 - - - 0.797 0.782 carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
74. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 2.455 - - - 0.804 - - 0.820 0.831 - acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
75. cask cask 3384 2.453 - - - 0.825 - - 0.847 0.781 -
76. cfb ENSDARG00000055278, ENSDARG00000110358 1725 2.452 - - - 0.845 - - - 0.832 0.775 complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
77. sardh ENSDARG00000058102, ENSDARG00000112110 2150 2.446 - - 0.871 - - - - 0.807 0.768 sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
78. slc2a3a ENSDARG00000013295 2449 2.441 - - 0.712 - - 0.997 0.732 - - solute carrier family 2 (facilitated glucose transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-040718-390]
79. npc2 ENSDARG00000090912 21929 2.44 - - - - - 0.720 - 0.843 0.877 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
80. TMEM179 ENSDARG00000013292 3452 2.428 - - - 0.899 - - - 0.800 0.729 transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
81. g6pca.2 ENSDARG00000013721 2034 2.424 - - - - - - 0.832 0.765 0.827 glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
82. C6H17orf67 C6H17orf67 687 2.42 - - - - - - 0.905 0.771 0.744
83. apoa1a ENSDARG00000012076, ENSDARG00000110395 163437 2.419 - - 0.877 0.777 - - - 0.765 - apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
84. znrf2a ENSDARG00000077855 1845 2.418 - - - 0.810 - - 0.847 - 0.761 zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
85. PLCXD1_4 PLCXD1_4 3673 2.408 - - 0.800 0.855 - - - - 0.753
86. APOA4_1 APOA4_1 3645 2.407 - - - 0.757 - - 0.895 0.755 -
87. CNDP1 CNDP1 6456 2.399 - - 0.805 - - - 0.764 0.830 -
88. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 2.398 - - 0.800 0.729 - - 0.869 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
89. plg ENSDARG00000023111 2429 2.398 - - 0.816 0.745 - - - 0.837 - plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
90. suclg2 ENSDARG00000044914 7950 2.394 - - - - - - 0.803 0.803 0.788 succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
91. cyp2aa4 ENSDARG00000098803 1762 2.392 - - - 0.730 - - 0.922 0.740 - cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
92. zgc:158403 ENSDARG00000062757 710 2.382 - - - - - - 0.879 0.793 0.710 zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
93. serpinc1 ENSDARG00000042684, ENSDARG00000110644, ENSDARG00000114606 1045 2.377 - - - 0.773 - - 0.808 0.796 - serpin peptidase inhibitor, clade C (antithrombin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-264]
94. hp_1 ENSDARG00000051890, ENSDARG00000095807 1049 2.375 - - - 0.707 - - 0.892 - 0.776 haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
95. slc38a7 ENSDARG00000012002 2219 2.372 - - 0.783 0.745 - - - - 0.844 solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
96. fga ENSDARG00000020741 5580 2.372 - - 0.770 - - - - 0.766 0.836 fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
97. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 2.367 - - 0.773 0.789 - - - 0.805 - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
98. fabp1b.1 ENSDARG00000059227 5670 2.366 - - - 0.811 - - - 0.705 0.850 fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
99. hoga1 ENSDARG00000018944 800 2.365 - - 0.790 - - - 0.801 0.774 - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
100. serpina1 ENSDARG00000090286 8108 2.363 - - 0.764 - - - - 0.793 0.806 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]

There are 1230 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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