Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for stra13

Gene Name Gene ID Reads Annotation
stra13 598 stimulated by retinoic acid 13 homolog (mouse)










Genes with expression patterns similar to stra13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stra13 598 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stimulated by retinoic acid 13 homolog (mouse)
2. foxo1b ENSDARG00000061549 790 1.757 - - - - - 0.930 0.827 - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
3. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 1.737 - - - - - 0.964 0.773 - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
4. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.725 - - - - - 0.962 - 0.763 - abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
5. AC024175.9 AC024175.9 56 1.721 - 0.774 - - - 0.947 - - -
6. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 1.712 - - - - - 0.921 0.791 - - glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
7. slc6a13 369 1.688 - 0.808 - - - 0.880 - - - solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
8. ccnt2a ENSDARG00000036685 168 1.687 - - - - - 0.967 0.720 - - cyclin T2a [Source:ZFIN;Acc:ZDB-GENE-030131-5779]
9. srek1ip1 ENSDARG00000043728 985 1.629 - 0.715 - - - 0.914 - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
10. litaf ENSDARG00000103483 217 1.619 - - - - - 0.896 0.723 - - lipopolysaccharide-induced TNF factor [Source:ZFIN;Acc:ZDB-GENE-040704-23]
11. acbd6 ENSDARG00000039456 2355 1.559 - 0.770 - - - - 0.789 - - acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
12. CORIN ENSDARG00000101281 654 1.553 - - - - - 0.789 - 0.764 - corin, serine peptidase [Source:ZFIN;Acc:ZDB-GENE-060224-3]
13. clptm1 ENSDARG00000018973, ENSDARG00000109534, ENSDARG00000114443 2439 1.532 - - - - - 0.790 0.742 - - cleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
14. TANC2 TANC2 1104 1.515 - - - - - 0.735 0.780 - -
15. hug 4100 1.49 - - - - - - 0.726 0.764 - HuG, transcript variant X2
16. med6 ENSDARG00000034734 2711 1.471 - - - - - 0.748 - - 0.723 mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
17. suv420h2 2186 1.45 - - - - - - 0.720 0.730 - suppressor of variegation 4-20 homolog 2 (Drosophila)
18. atl2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1582 1.425 - 0.705 - - - 0.720 - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
19. samd11 ENSDARG00000077852 631 0.981 - - - - - 0.981 - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
20. rdh8b ENSDARG00000105060 183 0.98 - - - - - 0.980 - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
21. rprd2a ENSDARG00000058089 743 0.98 - - - - - 0.980 - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
22. RECQL4 ENSDARG00000077516 462 0.978 - - - - - 0.978 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
23. slc12a9 ENSDARG00000060366 293 0.976 - - - - - 0.976 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
24. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.975 - - - - - 0.975 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
25. si:ch211-86h15.1 ENSDARG00000074098 354 0.975 - - - - - 0.975 - - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
26. rabep2 ENSDARG00000061213 465 0.974 - - - - - 0.974 - - - rabaptin, RAB GTPase binding effector protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-572]
27. dscc1 ENSDARG00000019907 720 0.973 - - - - - 0.973 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
28. gdap1l1 ENSDARG00000028628 233 0.973 - - - - - 0.973 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
29. ube2j1 ENSDARG00000033489 497 0.972 - - - - - 0.972 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
30. col17a1b ENSDARG00000079011 143 0.972 - - - - - 0.972 - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
31. si:zfos-364h11.1 99 0.971 - - - - - 0.971 - - - si:zfos-364h11.1, transcript variant X4
32. ZC3H11A ENSDARG00000009754 281 0.971 - - - - - 0.971 - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
33. ik ENSDARG00000004161 3132 0.97 - - - - - 0.970 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
34. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.97 - - - - - 0.970 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
35. ccdc173 ENSDARG00000077928 260 0.968 - - - - - 0.968 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
36. FP236334.1 FP236334.1 345 0.967 - - - - - 0.967 - - -
37. inhbab ENSDARG00000024759 29 0.967 - - - - - 0.967 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
38. tmem53 ENSDARG00000038789 411 0.967 - - - - - 0.967 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
39. FYCO1 FYCO1 194 0.966 - - - - - 0.966 - - -
40. znf750 ENSDARG00000102267 327 0.966 - - - - - 0.966 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
41. psmg2 ENSDARG00000035987 1938 0.965 - - - - - 0.965 - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
42. pcgf5b ENSDARG00000052388 163 0.965 - - - - - 0.965 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
43. si:dkey-117n7.5 ENSDARG00000089640 452 0.965 - - - - - 0.965 - - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
44. KCNAB3 KCNAB3 134 0.965 - - - - - 0.965 - - -
45. fosb ENSDARG00000055751 170 0.964 - - - - - 0.964 - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
46. smim8 ENSDARG00000071040 622 0.964 - - - - - 0.964 - - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
47. SLC22A15 ENSDARG00000055445 111 0.964 - - - - - 0.964 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
48. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.964 - - - - - 0.964 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
49. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.964 - - - - - 0.964 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
50. CU929417.2 CU929417.2 94 0.964 - - - - - 0.964 - - -
51. CABZ01072083.1 CABZ01072083.1 56 0.964 - - - - - 0.964 - - -
52. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.964 - - - - - 0.964 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
53. crybb3 ENSDARG00000041301 48 0.963 - - - - - 0.963 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
54. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.963 - - - - - 0.963 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
55. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.963 - - - - - 0.963 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
56. sc:d0139 sc:d0139 233 0.963 - - - - - 0.963 - - -
57. CCDC64B CCDC64B 337 0.963 - - - - - 0.963 - - -
58. si:ch211-105d18.6 si:ch211-105d18.6 59 0.963 - - - - - 0.963 - - -
59. CCNDBP1 ENSDARG00000039328 486 0.962 - - - - - 0.962 - - - cyclin D-type binding-protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-17]
60. si:dkey-240e12.6 ENSDARG00000110137 674 0.962 - - - - - 0.962 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
61. zgc:110286 92 0.962 - - - - - 0.962 - - - zgc:110286
62. ankrd39 ENSDARG00000041350 73 0.961 - - - - - 0.961 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
63. CIR1 ENSDARG00000099733 66 0.961 - - - - - 0.961 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
64. CR759816.1 ENSDARG00000098977 27 0.961 - - - - - 0.961 - - -
65. slc6a19b ENSDARG00000056719 140 0.961 - - - - - 0.961 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
66. sema6d ENSDARG00000002748 133 0.961 - - - - - 0.961 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
67. bace2 ENSDARG00000044781 17 0.961 - - - - - 0.961 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
68. si:dkey-57h18.2 33 0.961 - - - - - 0.961 - - - si:dkey-57h18.2, transcript variant X1
69. rngtt ENSDARG00000032261 833 0.961 - - - - - 0.961 - - - RNA guanylyltransferase and 5'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-2087]
70. si:dkey-115f9.2 si:dkey-115f9.2 18 0.961 - - - - - 0.961 - - -
71. TDRD15 TDRD15 46 0.96 - - - - - 0.960 - - -
72. CU302436.3 CU302436.3 174 0.96 - - - - - 0.960 - - -
73. slco2a1 ENSDARG00000061896 58 0.96 - - - - - 0.960 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
74. kmt2e ENSDARG00000007523 1851 0.96 - - - - - 0.960 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
75. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.96 - - - - - 0.960 - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
76. CR759791.3 CR759791.3 134 0.96 - - - - - 0.960 - - -
77. egr3 ENSDARG00000089156 71 0.96 - - - - - 0.960 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
78. traf2b ENSDARG00000101036 429 0.96 - - - - - 0.960 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
79. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.959 - - - - - 0.959 - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
80. nr1d2b ENSDARG00000009594 1144 0.959 - - - - - 0.959 - - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
81. rbm34 ENSDARG00000101877 1573 0.959 - - - - - 0.959 - - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
82. GCNT7 ENSDARG00000040608 91 0.959 - - - - - 0.959 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
83. nus1 ENSDARG00000027813 1417 0.959 - - - - - 0.959 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
84. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 0.959 - - - - - 0.959 - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
85. RBMS1 RBMS1 258 0.959 - - - - - 0.959 - - -
86. dre-mir-429b ENSDARG00000082968 212 0.958 - - - - - 0.958 - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
87. rab9a ENSDARG00000045027 201 0.958 - - - - - 0.958 - - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
88. mif ENSDARG00000071336 1328 0.958 - - - - - 0.958 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
89. rhoab ENSDARG00000094673 26 0.958 - - - - - 0.958 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
90. ccdc25 ENSDARG00000021753 3837 0.958 - - - - - 0.958 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
91. FP103059.1 FP103059.1 750 0.957 - - - - - 0.957 - - -
92. sez6a ENSDARG00000100876 35 0.957 - - - - - 0.957 - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
93. CU929328.1 ENSDARG00000105332 31 0.957 - - - - - 0.957 - - -
94. adamts1 ENSDARG00000103519 539 0.957 - - - - - 0.957 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
95. si:ch211-193k19.1 ENSDARG00000035660 636 0.957 - - - - - 0.957 - - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
96. CABZ01005777.1 CABZ01005777.1 505 0.957 - - - - - 0.957 - - -
97. MYOF ENSDARG00000006112 436 0.956 - - - - - 0.956 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
98. pip5k1ab ENSDARG00000024642 1988 0.956 - - - - - 0.956 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
99. CDK5RAP2 CDK5RAP2 636 0.956 - - - - - 0.956 - - -
100. ngly1 ENSDARG00000003205 733 0.956 - - - - - 0.956 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]

There are 911 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA