Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for stmn1a

Gene Name Gene ID Reads Annotation
stmn1a ENSDARG00000004169 21169 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]










Genes with expression patterns similar to stmn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stmn1a ENSDARG00000004169 21169 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
2. ncl ENSDARG00000002710 16951 3.738 - 0.711 0.716 0.802 0.778 - - - 0.731 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
3. hmgb2b ENSDARG00000053990 11519 3.412 0.827 - - 0.973 - - 0.785 - 0.827 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
4. prmt1 ENSDARG00000010246 11311 3.264 0.764 - 0.729 0.951 - - 0.820 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
5. smc1al ENSDARG00000058203 8838 3.22 0.729 - - - 0.870 - 0.843 - 0.778 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
6. tgif1 ENSDARG00000059337 4020 3.155 - 0.724 - - 0.877 - 0.776 - 0.778 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
7. smarca5 ENSDARG00000052348 15433 3.103 - 0.737 0.788 - 0.823 - - - 0.755 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
8. kif22 ENSDARG00000102624 3694 3.028 0.785 - 0.713 - - - 0.763 - 0.767 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
9. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 3.022 0.729 0.726 0.718 - 0.849 - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
10. ddx39ab ENSDARG00000015111 11619 3.007 0.735 - 0.700 - - - 0.812 - 0.760 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
11. whsc1l1 8544 2.985 0.763 - - - - - 0.717 0.778 0.727 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
12. supt16h ENSDARG00000079949 4755 2.652 - - - 0.972 0.891 - 0.789 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
13. gpx4b ENSDARG00000076836 8085 2.649 - - - 0.935 - 0.947 0.767 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
14. zgc:77262 ENSDARG00000044545 5563 2.62 - - 0.705 0.948 - 0.967 - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
15. khsrp ENSDARG00000026489 15738 2.538 0.861 - - - - - 0.888 - 0.789 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
16. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.532 - - - - - 0.844 0.841 - 0.847 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
17. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.527 - - - 0.965 - - 0.798 - 0.764 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
18. sumo3a ENSDARG00000028119 13447 2.525 0.832 - - - - - 0.882 - 0.811 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
19. rnf7 ENSDARG00000055524 3390 2.506 0.759 - - - - 0.967 0.780 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
20. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.481 - - - - 0.862 - 0.800 - 0.819 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
21. dla ENSDARG00000010791 9281 2.451 0.763 - - 0.964 - - - - 0.724 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
22. wu:fb17g07 wu:fb17g07 10567 2.448 0.703 - - 0.955 - - 0.790 - -
23. wu:fk48d07 wu:fk48d07 13245 2.445 0.704 - - - - 0.928 - - 0.813
24. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.441 - - - - 0.868 - 0.814 - 0.759 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
25. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.433 - - - - - 0.976 0.734 - 0.723 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
26. maf1 ENSDARG00000013122 3365 2.43 0.733 - - - - 0.968 0.729 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
27. ubtf ENSDARG00000035066 4070 2.43 - 0.704 - - 0.865 - 0.861 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
28. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 2.423 - - - - 0.855 - 0.831 - 0.737 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
29. snrpf ENSDARG00000105037 10241 2.416 0.791 0.755 - - - - 0.870 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
30. pbx4 ENSDARG00000052150 35676 2.415 0.860 0.787 - - - - 0.768 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
31. hnrnpub ENSDARG00000004735 16496 2.406 0.834 - - - - - 0.765 - 0.807 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
32. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.403 0.845 - 0.715 - - - - 0.843 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
33. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.402 - - 0.704 - 0.891 - - - 0.807 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
34. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 2.395 0.730 0.786 - - - - 0.879 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
35. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.392 - 0.714 - - - - 0.931 - 0.747 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
36. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 2.383 - - 0.719 - - 0.917 0.747 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
37. HNRNPAB HNRNPAB 22267 2.377 - - - - 0.798 - 0.832 - 0.747
38. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 2.366 - - 0.809 - 0.836 - - - 0.721 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
39. si:dkeyp-44a8.2 ENSDARG00000092493 8308 2.362 0.742 - - - - - 0.860 - 0.760 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
40. vdac1 ENSDARG00000045132 8051 2.349 0.820 - - 0.789 - - 0.740 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
41. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.348 0.748 - - - 0.884 - 0.716 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
42. MATR3 MATR3 3962 2.347 - 0.703 - - 0.864 - 0.780 - -
43. fen1 ENSDARG00000011404 3358 2.343 - - 0.750 - - - 0.838 - 0.755 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
44. sox3 ENSDARG00000053569 12016 2.343 0.760 - 0.722 - - - - - 0.861 SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
45. parp1 ENSDARG00000019529 6787 2.341 0.792 - 0.783 - - - - - 0.766 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
46. nucks1a ENSDARG00000078473 28285 2.34 - - 0.706 0.905 - - - 0.729 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
47. SNRPG ENSDARG00000099667 18697 2.337 - 0.742 - - - - 0.754 - 0.841 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
48. tmem35 ENSDARG00000052567 5685 2.328 0.854 - - - - - - 0.739 0.735 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
49. psmb7 ENSDARG00000037962 11542 2.325 - 0.711 - - - - 0.778 - 0.836 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
50. hmgb1b ENSDARG00000030479 10398 2.322 0.822 0.721 0.779 - - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
51. rbb4 rbb4 15541 2.317 - - 0.827 - - - 0.741 - 0.749
52. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 2.314 - - - - 0.730 0.756 0.828 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
53. elof1 ENSDARG00000099453 6176 2.314 0.744 - - - - - 0.829 0.741 - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
54. ezh2 ENSDARG00000010571 3273 2.308 - - 0.777 - - - 0.807 - 0.724 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
55. hdac1 ENSDARG00000015427 19804 2.304 0.809 - 0.751 - - - - - 0.744 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
56. snrpc ENSDARG00000009871 9567 2.303 0.760 - - - - - 0.775 - 0.768 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
57. u2af1 ENSDARG00000015325 3217 2.296 0.704 - - - - - 0.818 - 0.774 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
58. hsp90ab1 ENSDARG00000029150 102372 2.288 0.750 - 0.767 0.771 - - - - - heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
59. marcksl1b ENSDARG00000035715 37390 2.285 0.824 - 0.714 - - - - - 0.747 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
60. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 2.284 - 0.746 0.764 - - - - - 0.774 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
61. cdk2 ENSDARG00000026577 2835 2.279 - 0.733 - - - - 0.795 - 0.751 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
62. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.27 0.743 0.718 - - - - - - 0.809 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
63. lfng ENSDARG00000037879 11783 2.264 0.817 0.735 - - - - - - 0.712 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
64. srsf4 ENSDARG00000105293 9657 2.25 0.720 0.771 - - - - 0.759 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
65. tle2 5014 2.238 0.780 - - - - - 0.745 0.713 - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
66. taf9 ENSDARG00000077870 6992 2.233 0.720 - - - - - 0.755 - 0.758 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
67. ENDOD1_5 ENDOD1_5 8723 2.223 0.781 0.709 0.733 - - - - - -
68. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.222 0.776 - - - - - 0.709 0.737 - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
69. CR936437.1 CR936437.1 6465 2.214 0.737 - 0.717 - - - 0.760 - -
70. e2f8 ENSDARG00000057323 1432 2.209 - - 0.738 - - - 0.705 - 0.766 E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
71. g3bp1 ENSDARG00000017741 7622 2.181 - 0.729 - - - - 0.734 - 0.718 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
72. tcf7l1b ENSDARG00000007369 2785 2.181 - - - 0.722 - - 0.755 - 0.704 transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
73. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.172 0.761 - 0.705 - - - - - 0.706 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
74. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.15 0.715 - 0.700 - - - - - 0.735 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
75. ip6k2 ip6k2 3926 1.914 - - - 0.937 - 0.977 - - -
76. C13H9orf72 C13H9orf72 2310 1.909 - - - 0.936 - 0.973 - - -
77. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.876 - - - 0.928 - 0.948 - - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
78. capn2b ENSDARG00000055592 5431 1.864 - - - 0.925 - 0.939 - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
79. nrf1 ENSDARG00000000018 4683 1.841 - - - - 0.872 0.969 - - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
80. elavl1 11672 1.84 - - - 0.947 0.893 - - - - ELAV like RNA binding protein 1, transcript variant X3
81. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.814 0.828 - - - - 0.986 - - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
82. nucks1b ENSDARG00000012777 4468 1.813 - - - 0.962 - - 0.851 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
83. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.794 - - - - 0.833 0.961 - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
84. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.79 - - - - - 0.966 0.824 - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
85. llgl1 ENSDARG00000009693 4205 1.785 - - - - - 0.951 0.834 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
86. txnl4a ENSDARG00000036190 2048 1.782 - - - - - 0.975 0.807 - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
87. mau2 ENSDARG00000042056 2378 1.777 - - - - - 0.987 0.790 - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
88. mob4 ENSDARG00000056085 17978 1.776 - 0.782 - - - 0.994 - - - MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
89. boc ENSDARG00000074335 4832 1.775 - - - - 0.864 - 0.911 - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
90. lmnb1 ENSDARG00000044299 9817 1.773 - - - 0.972 - - 0.801 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
91. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.768 - - - 0.948 - - 0.820 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
92. kdm1a ENSDARG00000060679 6152 1.766 - - - - - 0.975 0.791 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
93. mapre1b ENSDARG00000002659 9119 1.755 - - - 0.957 - - - - 0.798 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
94. SH3BGRL ENSDARG00000058302 4525 1.754 - - - 0.944 0.810 - - - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
95. creb1a ENSDARG00000053586 5068 1.749 - - - 0.952 - - - - 0.797 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
96. meis1 meis1 6937 1.746 0.862 - - - - 0.884 - - -
97. mllt10 ENSDARG00000045401 7557 1.745 - - - 0.959 - - 0.786 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
98. cux1a ENSDARG00000078459 3914 1.744 - - - - - 0.966 0.778 - - cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
99. taf10 ENSDARG00000068641 3333 1.733 - - - 0.944 - - 0.789 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
100. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.731 0.784 - - 0.947 - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]

There are 1659 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA