Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for stk3

Gene Name Gene ID Reads Annotation
stk3 ENSDARG00000011312, ENSDARG00000115118 460 serine/threonine kinase 3 (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-2845]










Genes with expression patterns similar to stk3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stk3 ENSDARG00000011312, ENSDARG00000115118 460 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/threonine kinase 3 (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-2845]
2. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 1.639 - 0.754 - - - - 0.885 - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
3. arap3 ENSDARG00000076801 725 1.571 - - - 0.860 - 0.711 - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
4. AOC3 AOC3 590 1.507 - 0.715 - - - - 0.792 - -
5. minal minal 383 1.505 - 0.793 - 0.712 - - - - -
6. asb6 ENSDARG00000007125 389 1.469 - 0.731 - 0.738 - - - - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
7. rdh8a ENSDARG00000028048 334 1.461 - - - 0.738 - - 0.723 - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
8. zgc:162780 ENSDARG00000069548 340 1.453 - - - 0.711 - - 0.742 - - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
9. trps1 ENSDARG00000104082 918 1.438 - 0.715 - 0.723 - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
10. eapp ENSDARG00000017272 404 0.942 - - - - - - 0.942 - - e2f-associated phosphoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-5529]
11. HSCB HSCB 395 0.904 - - - - - - 0.904 - -
12. dapk1 ENSDARG00000060093 351 0.889 - - - - - - 0.889 - - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
13. loxl5b ENSDARG00000076904 468 0.884 - - - 0.884 - - - - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
14. bcl9 ENSDARG00000036687 1124 0.883 - - - - - - 0.883 - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
15. haus7 ENSDARG00000037432, ENSDARG00000112118 820 0.876 - - - - - - 0.876 - - HAUS augmin-like complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-050506-15]
16. setd1ba ENSDARG00000060847, ENSDARG00000111265 146 0.875 - - - - - - 0.875 - - SET domain containing 1B, a [Source:ZFIN;Acc:ZDB-GENE-050309-289]
17. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.87 - - - - - - 0.870 - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
18. IL17RD ENSDARG00000098359 2309 0.864 - - - - - - 0.864 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
19. f3b ENSDARG00000005673 240 0.863 - 0.863 - - - - - - - coagulation factor IIIb [Source:ZFIN;Acc:ZDB-GENE-050417-234]
20. ankhb ENSDARG00000014969 328 0.856 - - - - - - 0.856 - - ANKH inorganic pyrophosphate transport regulator b [Source:ZFIN;Acc:ZDB-GENE-030131-2458]
21. gmpr2 ENSDARG00000061301 1132 0.849 - - - - - - 0.849 - - guanosine monophosphate reductase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1238]
22. zgc:173994 zgc:173994 204 0.848 - - - - - - 0.848 - -
23. capn7 ENSDARG00000102987 386 0.846 - - - - - - 0.846 - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
24. MED9 ENSDARG00000096631 755 0.846 - 0.846 - - - - - - - mediator complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:25487]
25. wnt6b ENSDARG00000073935 236 0.844 - - - - - - 0.844 - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
26. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.843 - - - 0.843 - - - - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
27. si:dkey-170k13.3 si:dkey-170k13.3 397 0.841 - - - 0.841 - - - - -
28. TMEM230 TMEM230 351 0.84 - - - - - - 0.840 - -
29. sc:d0139 sc:d0139 233 0.84 - 0.840 - - - - - - -
30. antxr1c ENSDARG00000063612 3203 0.84 - - - 0.840 - - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
31. BX927282.2 ENSDARG00000096925 221 0.839 - - - 0.839 - - - - -
32. rbpja ENSDARG00000003398 1309 0.838 - - - - - - 0.838 - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
33. cstf1 ENSDARG00000044820 1663 0.837 - - - - - 0.837 - - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
34. glsb ENSDARG00000040705 1439 0.837 - - - - - - 0.837 - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
35. nfic ENSDARG00000043210 266 0.836 - 0.836 - - - - - - - nuclear factor I/C [Source:ZFIN;Acc:ZDB-GENE-080305-2]
36. alg2 ENSDARG00000070399 772 0.836 - - - - - - 0.836 - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
37. pcnt ENSDARG00000033012 664 0.836 - - - - - - 0.836 - - pericentrin [Source:ZFIN;Acc:ZDB-GENE-030829-26]
38. acot8 ENSDARG00000014138 89 0.835 - - - - - - 0.835 - - acyl-CoA thioesterase 8 [Source:ZFIN;Acc:ZDB-GENE-041010-174]
39. OXR1 OXR1 378 0.834 - - - - - - 0.834 - -
40. nolc1 ENSDARG00000024561 3457 0.832 - - - - - - 0.832 - - nucleolar and coiled-body phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6349]
41. MPRIP ENSDARG00000105209 390 0.831 - - - - - - 0.831 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
42. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 0.831 - - - - - 0.831 - - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
43. NAGPA ENSDARG00000075149 983 0.829 - - - - - - 0.829 - - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070928-4]
44. si:ch211-113e8.10 ENSDARG00000079631 498 0.829 - - - - - - 0.829 - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
45. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 0.827 - - - - - - 0.827 - - fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
46. jarid2a ENSDARG00000060925 172 0.823 - 0.823 - - - - - - - jumonji, AT rich interactive domain 2a [Source:ZFIN;Acc:ZDB-GENE-061218-1]
47. tsc22d3 ENSDARG00000075666, ENSDARG00000114324 613 0.822 - - - 0.822 - - - - - TSC22 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1433]
48. mtmr8 ENSDARG00000008592, ENSDARG00000113186 337 0.822 - - - - - - 0.822 - - myotubularin related protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1016]
49. GK2 GK2 813 0.822 - - - - - - 0.822 - -
50. fzd7b ENSDARG00000027589 2562 0.821 - 0.821 - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
51. ube2j2 ENSDARG00000061161 844 0.819 - - - - - 0.819 - - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
52. tctex1d1 ENSDARG00000103545 409 0.817 - - - 0.817 - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
53. ptprub ENSDARG00000101081 147 0.817 - - - - - 0.817 - - - protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
54. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 0.816 - 0.816 - - - - - - - eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
55. tmem55a 1331 0.816 - 0.816 - - - - - - - transmembrane protein 55A
56. fam20c fam20c 603 0.816 - - - - - - 0.816 - -
57. C2H14orf119 C2H14orf119 716 0.815 - - - - - 0.815 - - -
58. si:dkey-17e16.8 284 0.815 - - - - - - 0.815 - - si:dkey-17e16.8
59. rbm39b ENSDARG00000041853 1421 0.815 - 0.815 - - - - - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
60. fam20b ENSDARG00000008573 1084 0.814 - - - - - - 0.814 - - family with sequence similarity 20, member B (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-040724-125]
61. nelfe ENSDARG00000004343 1647 0.813 - 0.813 - - - - - - - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
62. efnb3a ENSDARG00000112993 399 0.811 - - - 0.811 - - - - - ephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]
63. zyg11 ENSDARG00000007737 511 0.811 - - - - - - 0.811 - - zyg-11 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041014-17]
64. nhsa ENSDARG00000070227 686 0.811 - 0.811 - - - - - - - Nance-Horan syndrome a (congenital cataracts and dental anomalies) [Source:ZFIN;Acc:ZDB-GENE-090617-1]
65. pde4ba ENSDARG00000032868, ENSDARG00000110575 1024 0.81 - 0.810 - - - - - - - phosphodiesterase 4B, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-030131-9570]
66. si:ch73-353p21.5 si:ch73-353p21.5 568 0.81 - 0.810 - - - - - - -
67. KLHL2 ENSDARG00000061786 204 0.809 - 0.809 - - - - - - - kelch-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-090312-193]
68. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.807 - - - - - - 0.807 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
69. rnf114 ENSDARG00000009886 725 0.807 - - - 0.807 - - - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
70. frs2b ENSDARG00000037353 544 0.806 - - - 0.806 - - - - - fibroblast growth factor receptor substrate 2b [Source:ZFIN;Acc:ZDB-GENE-040718-406]
71. PLD5 PLD5 496 0.804 - - - - - - 0.804 - -
72. kdm2bb ENSDARG00000046010 747 0.803 - - - - - - 0.803 - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
73. cep55l ENSDARG00000102349 604 0.803 - - - 0.803 - - - - - centrosomal protein 55 like [Source:ZFIN;Acc:ZDB-GENE-050522-222]
74. thap3 ENSDARG00000041080, ENSDARG00000114392 220 0.803 - - - 0.803 - - - - - THAP domain containing, apoptosis associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-050327-4]
75. rnf185 ENSDARG00000032997 1490 0.803 - - - 0.803 - - - - - ring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
76. SHROOM2 SHROOM2 934 0.803 - - - - - - 0.803 - -
77. C11H19orf25 C11H19orf25 491 0.801 - - - - - 0.801 - - -
78. STARD4 ENSDARG00000102477 411 0.801 - - - 0.801 - - - - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
79. polr2i ENSDARG00000040443, ENSDARG00000110652 879 0.8 - 0.800 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide I [Source:ZFIN;Acc:ZDB-GENE-041010-106]
80. tnni2a.2 ENSDARG00000005841 483 0.799 - - - - - - 0.799 - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
81. trpt1 ENSDARG00000037628 1081 0.798 - 0.798 - - - - - - - tRNA phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050227-16]
82. nfkbiab ENSDARG00000007693 1345 0.798 0.798 - - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
83. gmeb1 ENSDARG00000062060 456 0.797 0.797 - - - - - - - - glucocorticoid modulatory element binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-35]
84. znf259 znf259 1819 0.797 - - - 0.797 - - - - -
85. TMEM97 ENSDARG00000040553 530 0.793 - - - 0.793 - - - - - transmembrane protein 97 [Source:ZFIN;Acc:ZDB-GENE-110627-1]
86. surf4 ENSDARG00000104647 4203 0.793 - - - 0.793 - - - - - surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
87. zmiz1a ENSDARG00000074502 3920 0.793 0.793 - - - - - - - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
88. CU855890.3 CU855890.3 307 0.792 - - - - - - 0.792 - -
89. si:dkey-172m14.1 ENSDARG00000052693 875 0.792 - - - - - - 0.792 - - si:dkey-172m14.1 [Source:ZFIN;Acc:ZDB-GENE-060526-221]
90. CR382298.3 CR382298.3 666 0.792 - 0.792 - - - - - - -
91. dnal4a ENSDARG00000031116, ENSDARG00000117095 411 0.791 - - - 0.791 - - - - - dynein, axonemal, light chain 4a [Source:ZFIN;Acc:ZDB-GENE-040801-122]
92. spry2 ENSDARG00000078308 1200 0.79 - 0.790 - - - - - - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
93. EMILIN3 1347 0.789 - - - - - - 0.789 - - elastin microfibril interfacer 3
94. vgll4a ENSDARG00000094332 1410 0.789 - 0.789 - - - - - - - vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]
95. PKN2 ENSDARG00000101293 358 0.789 - 0.789 - - - - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
96. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.788 - - - 0.788 - - - - - PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
97. dctn4 ENSDARG00000023988 860 0.788 - - - - - - 0.788 - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
98. tbc1d12a ENSDARG00000038237 698 0.788 - - - - - - 0.788 - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
99. cry2b cry2b 517 0.786 - 0.786 - - - - - - -
100. si:ch211-163l21.8 ENSDARG00000042899 724 0.786 - 0.786 - - - - - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]

There are 426 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA