Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for stim1b

Gene Name Gene ID Reads Annotation
stim1b ENSDARG00000061560 146 stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]










Genes with expression patterns similar to stim1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stim1b ENSDARG00000061560 146 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
2. zgc:92161 ENSDARG00000101749 27 1.861 - 0.889 - 0.972 - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
3. map3k8 ENSDARG00000061710 76 1.733 0.760 - - 0.973 - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
4. FGD5_1 FGD5_1 8 1.718 - 0.889 0.829 - - - - - -
5. CABZ01114098.1 CABZ01114098.1 28 1.698 - 0.819 - - - - 0.879 - -
6. gtdc1 ENSDARG00000020642 299 1.698 - 0.776 - 0.922 - - - - - glycosyltransferase-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-8]
7. cyb561 ENSDARG00000038176 55 1.686 - 0.946 - - - 0.740 - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
8. si:ch211-191a16.5 ENSDARG00000096545 45 1.662 - - 0.912 - - - 0.750 - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
9. slc51a ENSDARG00000045306 33 1.653 0.828 0.825 - - - - - - - solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
10. 5S_rRNA_16 5S_rRNA_16 10 1.653 - 0.889 - - - 0.764 - - -
11. prr14 ENSDARG00000089232 495 1.643 - 0.865 - 0.778 - - - - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
12. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.638 - 0.711 - 0.927 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
13. CR936200.1 CR936200.1 327 1.623 0.797 0.826 - - - - - - -
14. zgc:113102 ENSDARG00000103530, ENSDARG00000113011 86 1.606 0.787 0.819 - - - - - - - zgc:113102 [Source:ZFIN;Acc:ZDB-GENE-050306-35]
15. PEG3_29 PEG3_29 28 1.593 - 0.853 - - - 0.740 - - -
16. si:dkeyp-80c12.4 ENSDARG00000036479 7 1.575 - 0.835 - - - 0.740 - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
17. btr02 ENSDARG00000052215 401 1.567 - - 0.752 0.815 - - - - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
18. atr ENSDARG00000079625 231 1.565 - - - 0.846 - - 0.719 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
19. si:ch211-85n16.3 ENSDARG00000096346 1095 1.557 - 0.701 - 0.856 - - - - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
20. pcsk2 ENSDARG00000019451 442 1.55 0.707 - - 0.843 - - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
21. rab42a ENSDARG00000034215 692 1.543 - - - 0.802 - - 0.741 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
22. ephx2 ENSDARG00000040255 105 1.543 - 0.731 - - - 0.812 - - - epoxide hydrolase 2, cytoplasmic [Source:ZFIN;Acc:ZDB-GENE-041212-70]
23. fuom ENSDARG00000039422 82 1.54 - 0.740 0.800 - - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
24. FP017295.1 ENSDARG00000091185 22 1.54 0.760 0.780 - - - - - - -
25. si:ch211-222k6.1 20 1.54 - - 0.808 - 0.732 - - - - si:ch211-222k6.1, transcript variant X6
26. slc15a2 ENSDARG00000032010 451 1.526 - 0.722 - 0.804 - - - - - solute carrier family 15 (oligopeptide transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5866]
27. cntn5 ENSDARG00000021584 30 1.51 0.760 - - - - - 0.750 - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
28. CABZ01044346.1 CABZ01044346.1 12 1.51 0.760 - - - - - 0.750 - -
29. si:ch211-152l15.4 si:ch211-152l15.4 13 1.51 0.760 - - - - - 0.750 - -
30. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 1.505 - 0.736 - 0.769 - - - - - LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
31. bckdhb ENSDARG00000014676 17 1.5 0.760 - - - - 0.740 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
32. tecta ENSDARG00000059558 15 1.485 - 0.704 0.781 - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
33. scn1a 8 1.485 0.760 - - - 0.725 - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
34. sdccag3 239 1.477 0.760 - - - - - 0.717 - - serologically defined colon cancer antigen 3, transcript variant X2
35. CU672227.1 ENSDARG00000105807 15 1.471 0.760 - - - 0.711 - - - -
36. si:dkey-256e21.1 si:dkey-256e21.1 11 1.47 - - - - - 0.720 0.750 - -
37. mylk2 ENSDARG00000031698 135 1.465 - 0.734 - - - 0.731 - - - myosin light chain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080616-2]
38. CU466279.1 CU466279.1 84 1.454 - 0.704 0.750 - - - - - -
39. ZNF76 ENSDARG00000013279 260 1.444 - 0.743 - - - 0.701 - - - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
40. CR388095.2 ENSDARG00000117604 76 1.442 - - 0.706 - - - 0.736 - -
41. CABZ01073032.1 CABZ01073032.1 125 1.413 0.712 - - - - - 0.701 - -
42. pde10a ENSDARG00000003449 60 1 - 1.000 - - - - - - - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
43. msxe msxe 362 1 - 1.000 - - - - - - -
44. rassf9 ENSDARG00000074721 448 0.977 - - - 0.977 - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
45. cyp2v1 ENSDARG00000018485 694 0.976 - - - 0.976 - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
46. dhx40 ENSDARG00000041586 131 0.975 0.975 - - - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Source:ZFIN;Acc:ZDB-GENE-080507-1]
47. si:dkey-16b10.3 si:dkey-16b10.3 21 0.975 - - - 0.975 - - - - -
48. CRTC1 47 0.974 - - - 0.974 - - - - - CREB regulated transcription coactivator 1
49. gpr186 ENSDARG00000094860 53 0.974 - - - 0.974 - - - - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
50. si:ch73-239k17.1 si:ch73-239k17.1 44 0.972 - - - 0.972 - - - - -
51. adam10b ENSDARG00000015502 26 0.972 - - - 0.972 - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
52. CD53 CD53 108 0.971 - - - 0.971 - - - - -
53. CABZ01021433.1 ENSDARG00000105696 74 0.97 - - - 0.970 - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
54. HELZ2_1 ENSDARG00000012600 53 0.97 - - - 0.970 - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
55. ugt2a4 ENSDARG00000051940 85 0.969 - - - 0.969 - - - - - UDP glucuronosyltransferase 2 family, polypeptide A4 [Source:ZFIN;Acc:ZDB-GENE-080721-23]
56. ccm2l ENSDARG00000063089 100 0.969 - - - 0.969 - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
57. arhgap25 ENSDARG00000061784 112 0.969 - - - 0.969 - - - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
58. cyp2aa11 ENSDARG00000103456 42 0.968 - - - 0.968 - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 11 [Source:ZFIN;Acc:ZDB-GENE-110114-3]
59. CABZ01054965.1 ENSDARG00000090844 74 0.968 - - - 0.968 - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
60. zgc:114046 ENSDARG00000091728 68 0.968 - - - 0.968 - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
61. FP103003.1 FP103003.1 167 0.968 - - - 0.968 - - - - -
62. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.967 - - - 0.967 - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
63. CABZ01081897.1 ENSDARG00000110500 253 0.966 - - - 0.966 - - - - -
64. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.965 - - - 0.965 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
65. ENSDARG00000092971 ENSDARG00000092971 563 0.965 - - - 0.965 - - - - -
66. zgc:154075 ENSDARG00000067630 284 0.965 - - - 0.965 - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
67. aatka ENSDARG00000078222 218 0.965 - - - 0.965 - - - - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
68. ptprz1b ENSDARG00000020871 435 0.965 - - - 0.965 - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
69. si:ch211-133l11.10 ENSDARG00000005626 381 0.964 - - - 0.964 - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
70. lingo4b ENSDARG00000078527 235 0.963 - - - 0.963 - - - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
71. si:ch211-81a5.8 ENSDARG00000070972 59 0.963 - - - 0.963 - - - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
72. C9H3orf70 C9H3orf70 225 0.963 - - - 0.963 - - - - -
73. CU861664.1 CU861664.1 53 0.96 - - - 0.960 - - - - -
74. zgc:136791 97 0.96 - 0.960 - - - - - - - zgc:136791, transcript variant X3
75. eif4enif1 ENSDARG00000016177 238 0.96 - - - 0.960 - - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
76. si:dkey-7b17.1 si:dkey-7b17.1 101 0.96 - 0.960 - - - - - - -
77. CU928220.1 CU928220.1 146 0.959 - - - 0.959 - - - - -
78. wdfy2 ENSDARG00000040453 406 0.959 - - - 0.959 - - - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
79. pparaa ENSDARG00000031777 216 0.959 - - - 0.959 - - - - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
80. zgc:195282 ENSDARG00000079488 475 0.957 - - - 0.957 - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
81. ift57 ENSDARG00000021022 288 0.957 - - - 0.957 - - - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
82. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 0.956 - 0.956 - - - - - - - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
83. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.956 - - - 0.956 - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
84. zgc:91811 zgc:91811 186 0.955 - 0.955 - - - - - - -
85. spop ENSDARG00000100519 177 0.954 - - - 0.954 - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
86. C12H10orf71 C12H10orf71 595 0.953 - - - 0.953 - - - - -
87. memo1 ENSDARG00000010823 1681 0.952 - - - 0.952 - - - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
88. wacb ENSDARG00000099015 146 0.952 - - - 0.952 - - - - - WW domain containing adaptor with coiled-coil b [Source:ZFIN;Acc:ZDB-GENE-041010-46]
89. fam203a fam203a 570 0.95 - - - 0.950 - - - - -
90. CR627484.1 CR627484.1 452 0.95 - - - 0.950 - - - - -
91. usp33 ENSDARG00000016163 651 0.948 - - - 0.948 - - - - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
92. ptprua ENSDARG00000092638 479 0.948 - - - 0.948 - - - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
93. rela ENSDARG00000098696 889 0.948 - - - 0.948 - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
94. ercc5 ENSDARG00000023678 468 0.947 - - - 0.947 - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
95. JPH3 ENSDARG00000102204 283 0.946 - 0.946 - - - - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
96. MYOM2 MYOM2 6 0.946 - 0.946 - - - - - - -
97. CMTM8 CMTM8 71 0.946 - 0.946 - - - - - - -
98. znf804a ENSDARG00000027079 121 0.946 - 0.946 - - - - - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
99. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 0.946 - 0.946 - - - - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
100. rtn4rl1b ENSDARG00000098528 31 0.946 - 0.946 - - - - - - - reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]

There are 1297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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