Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for stau1

Gene Name Gene ID Reads Annotation
stau1 ENSDARG00000044182, ENSDARG00000115476 6121 staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]










Genes with expression patterns similar to stau1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
2. Sep-02 Sep-02 10074 2.636 - - - - 0.926 0.842 0.868 - -
3. nudt3a ENSDARG00000016256 2713 2.5 - 0.765 - - 0.954 - 0.781 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
4. cltcb ENSDARG00000090716 5544 2.483 - - - - 0.937 0.804 0.742 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
5. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.439 - - - - 0.953 0.773 0.713 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
6. mars ENSDARG00000034396 3618 2.384 0.748 0.826 - - - - 0.810 - - methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
7. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 2.38 - 0.826 - - - 0.742 0.812 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
8. prmt1 ENSDARG00000010246 11311 2.363 0.741 0.855 - - - 0.767 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
9. pl10 pl10 10795 2.345 - 0.798 - - 0.770 - 0.777 - -
10. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.339 0.749 0.779 - - - - 0.811 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
11. ptenb ENSDARG00000056623 5783 2.325 - 0.769 - - - 0.806 0.750 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
12. BX511086.1 BX511086.1 8308 2.302 - 0.754 - - - 0.758 0.790 - -
13. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 2.283 - 0.777 - - - 0.753 0.753 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
14. pfn2l ENSDARG00000012682 21690 2.278 0.704 - - - 0.778 - 0.796 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
15. rac1 rac1 7341 2.257 - - - 0.724 - 0.792 0.741 - -
16. smc1al ENSDARG00000058203 8838 2.247 0.723 - - - - 0.758 0.766 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
17. zgc:193541 ENSDARG00000092873 21276 2.225 - - - - 0.760 0.704 0.761 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
18. papola ENSDARG00000009585 9567 2.208 - 0.765 0.733 0.710 - - - - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
19. C10H11orf30 C10H11orf30 1982 2.199 - 0.723 - - - 0.773 0.703 - -
20. arih2 ENSDARG00000012848 7087 2.198 - - - 0.725 - 0.723 0.750 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
21. ccdc25 ENSDARG00000021753 3837 2.183 - 0.726 - 0.755 - - 0.702 - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
22. GABARAP GABARAP 8341 2.182 - 0.758 - - - 0.708 0.716 - -
23. ube2v2 ENSDARG00000028198 23341 2.169 0.716 - - - - 0.711 0.742 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
24. carm1 ENSDARG00000018698 5599 2.129 - 0.706 - - - 0.711 0.712 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
25. VPS37B_1 VPS37B_1 1816 1.782 - 0.830 - - 0.952 - - - -
26. smek1 ENSDARG00000042187 3509 1.774 - - - - 0.942 - 0.832 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
27. ash2l ENSDARG00000060392 4916 1.757 - - - - 0.948 - 0.809 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
28. snx1a ENSDARG00000071031 3975 1.752 - - - - 0.959 - 0.793 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
29. fkbp3 ENSDARG00000098059 5428 1.75 - - - - 0.944 - 0.806 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
30. emc1 ENSDARG00000057255 3582 1.724 - 0.768 - - 0.956 - - - - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
31. pds5b ENSDARG00000098897 1732 1.715 - - - - 0.960 - 0.755 - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
32. denr ENSDARG00000037229 8370 1.708 - - - - 0.916 - 0.792 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
33. ifrd1 ENSDARG00000068708 2858 1.707 - - - - 0.953 - - - 0.754 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
34. commd4 ENSDARG00000061946 3281 1.706 - 0.751 - - 0.955 - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
35. srsf6a ENSDARG00000013729 8576 1.704 - - - - 0.882 - 0.822 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
36. kcnq5a ENSDARG00000069954 492 1.701 - - - - 0.957 - - - 0.744 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
37. arglu1a ENSDARG00000019223 8716 1.696 - - - - 0.918 0.778 - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
38. sox5 ENSDARG00000011582 3632 1.695 - - - - 0.902 - - - 0.793 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
39. cwc22 ENSDARG00000014008 2385 1.695 - - - - 0.966 - - - 0.729 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
40. klf11a ENSDARG00000030844 3972 1.694 - - - - 0.952 0.742 - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
41. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.688 - - - - 0.920 - 0.768 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
42. flii ENSDARG00000059701 2290 1.687 - 0.817 - - - - - - 0.870 flightless I actin binding protein [Source:ZFIN;Acc:ZDB-GENE-071212-3]
43. ppp1cab ENSDARG00000071566 4350 1.686 - - - - 0.950 - 0.736 - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
44. AP2A1 ENSDARG00000054320 5591 1.682 - 0.718 - - 0.964 - - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
45. tet3 ENSDARG00000062646 6672 1.682 - - - - 0.914 - 0.768 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
46. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.678 - 0.721 - - 0.957 - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
47. vgll4b ENSDARG00000103730 5266 1.674 - - - - 0.947 - 0.727 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
48. cd248b ENSDARG00000077938 2561 1.674 - 0.714 - - 0.960 - - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
49. snrpe ENSDARG00000033175 7462 1.671 - - - - 0.955 - 0.716 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
50. tmem234 ENSDARG00000078333 488 1.667 - 0.712 - - 0.955 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
51. timm10 ENSDARG00000069116 4459 1.667 - - - - 0.950 - 0.717 - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
52. srcap ENSDARG00000005236 1740 1.664 - - - - 0.952 - 0.712 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
53. ARID3A ENSDARG00000070843 1613 1.663 - - - - 0.956 - - - 0.707 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
54. Sep-06 Sep-06 5465 1.663 - 0.839 - - - - 0.824 - -
55. wdr43 ENSDARG00000077264 1992 1.66 - - - - 0.958 - 0.702 - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
56. acap3a ENSDARG00000075990 9652 1.659 - - - - - 0.790 0.869 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
57. cpsf3 ENSDARG00000027649 6897 1.655 - - - - 0.929 0.726 - - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
58. mllt10 ENSDARG00000045401 7557 1.653 - 0.716 - - 0.937 - - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
59. E2F6 E2F6 1271 1.649 - - - - 0.919 0.730 - - -
60. uqcrc2a ENSDARG00000014794 3949 1.644 - 0.854 - - - - 0.790 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
61. hm13 ENSDARG00000037846 5019 1.643 - 0.867 - - - - 0.776 - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
62. snrpc ENSDARG00000009871 9567 1.623 - - - - 0.880 - 0.743 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
63. tm9sf4 ENSDARG00000002536 1684 1.623 - - - - 0.911 - - - 0.712 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
64. wsb1 ENSDARG00000021343 3828 1.623 0.703 - - - 0.920 - - - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
65. glrx3 ENSDARG00000098785 4138 1.615 - 0.764 - - - - 0.851 - - glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
66. ube2nb ENSDARG00000045877 4583 1.614 - 0.828 - - - 0.786 - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
67. irf2bp2a ENSDARG00000004702 6719 1.609 - 0.856 - - - - 0.753 - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
68. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.609 - 0.782 - - - - 0.827 - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
69. pim1 ENSDARG00000100020 7035 1.603 - - - - - 0.793 0.810 - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
70. mrps9 ENSDARG00000061505 1636 1.6 - 0.855 - - - - - - 0.745 mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
71. ppap2b ppap2b 2900 1.599 0.718 0.881 - - - - - - -
72. phb ENSDARG00000057414 9551 1.598 - - - - 0.872 - 0.726 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
73. GIGYF1_1 GIGYF1_1 1865 1.597 - - - - - 0.809 0.788 - -
74. lypla2 ENSDARG00000053656 8971 1.597 - 0.765 - - - - 0.832 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
75. idh3a ENSDARG00000030278 2983 1.593 - 0.757 - - - 0.836 - - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
76. pa2g4b ENSDARG00000070657 7999 1.592 - 0.811 - - - - 0.781 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
77. pes ENSDARG00000018902 3286 1.587 - 0.819 - - - - - - 0.768 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
78. snrnp70 ENSDARG00000077126 5921 1.586 - 0.798 - - - 0.788 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
79. meis1 meis1 6937 1.586 - 0.853 - 0.733 - - - - -
80. kpna3 ENSDARG00000052641 5347 1.579 - 0.871 - - - - 0.708 - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
81. id2a ENSDARG00000055283 7428 1.579 - - - 0.739 - 0.840 - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
82. cct3 ENSDARG00000016173 15869 1.577 - - - - - - 0.712 - 0.865 chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
83. stip1 ENSDARG00000004906 7742 1.576 - - - 0.755 - - 0.821 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
84. gmps ENSDARG00000079848 8217 1.575 - - - - 0.812 0.763 - - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
85. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.575 - - - - 0.862 - 0.713 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
86. tpm1 ENSDARG00000087402 1666 1.572 - - - - - 0.866 0.706 - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
87. grpel2 ENSDARG00000069421 5673 1.572 - 0.828 - - - - - 0.744 - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
88. puf60a ENSDARG00000032175 5618 1.567 - 0.818 - - - - 0.749 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
89. PTP4A3 ENSDARG00000039997 3814 1.563 - 0.794 - - - - 0.769 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
90. timm9 ENSDARG00000043865 2456 1.561 - 0.740 - - - - 0.821 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
91. slc25a11 ENSDARG00000035741 3377 1.559 - - - - - 0.720 0.839 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
92. irf2bpl ENSDARG00000004297 1861 1.558 - 0.759 - - - 0.799 - - - interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
93. SERBP1 SERBP1 9276 1.558 - 0.783 - - - - 0.775 - -
94. eif4h ENSDARG00000042252 6742 1.557 - 0.710 - - - - 0.847 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
95. hadhb ENSDARG00000102055 9700 1.554 - 0.739 - - - - 0.815 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
96. prkacaa ENSDARG00000100349 2711 1.551 - 0.751 - - - - 0.800 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
97. ccdc47 ENSDARG00000054362 5970 1.551 - 0.828 - - - - 0.723 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
98. mcm4 ENSDARG00000040041 7971 1.549 - - - - - 0.812 0.737 - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
99. tufm ENSDARG00000104173 9292 1.547 0.779 - - - - - 0.768 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
100. txn2 ENSDARG00000034777 4071 1.544 - 0.768 - - - - 0.776 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]

There are 1629 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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