Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for stag1b

Gene Name Gene ID Reads Annotation
stag1b ENSDARG00000062137 1814 stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]










Genes with expression patterns similar to stag1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stag1b ENSDARG00000062137 1814 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
2. mbd3a ENSDARG00000061774 4047 2.502 0.817 - - - - - 0.974 - 0.711 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
3. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.502 - 0.939 - - - - 0.842 - 0.721 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
4. med14 ENSDARG00000009953 1383 2.472 - - - - - - 0.996 0.707 0.769 mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
5. mbnl2 ENSDARG00000018460 3328 1.969 - 0.998 - - - - 0.971 - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
6. nup133 ENSDARG00000010078 2373 1.874 - 0.999 - 0.875 - - - - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
7. cdca7a ENSDARG00000077620 9345 1.783 - - - - - - 0.947 0.836 - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
8. eif4a3 ENSDARG00000102978 16162 1.769 - 0.998 - - - - 0.771 - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
9. arid1aa ENSDARG00000101710 3644 1.761 - - - - - - 0.983 - 0.778 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
10. prpf8 ENSDARG00000026180 7026 1.747 - - - - - - 0.918 0.829 - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
11. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.725 0.728 0.997 - - - - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
12. sos2 ENSDARG00000060506 769 1.723 - - - 0.730 - - 0.993 - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
13. hnrnph1l ENSDARG00000005551 8727 1.72 - 0.996 - 0.724 - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
14. ddx5 ENSDARG00000038068 35302 1.708 - 0.910 - - - - 0.798 - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
15. ino80c ENSDARG00000055719 1512 1.696 - - - - - - 0.995 - 0.701 INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
16. kif11 ENSDARG00000010948 4973 1.682 - - - - - - 0.975 - 0.707 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
17. smyd1b ENSDARG00000091253 4964 1.675 - - - - - 0.757 0.918 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
18. lsm4 ENSDARG00000023852 6083 1.666 - - - - - - 0.955 - 0.711 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
19. MAP4K4 ENSDARG00000098670 4665 1.66 - - - - - - 0.949 - 0.711 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
20. arpc4 ENSDARG00000054063 6150 1.659 - 0.889 - - - - 0.770 - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
21. WDR61 ENSDARG00000007755 2827 1.627 - - - 0.863 - - - - 0.764 WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
22. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.626 - 0.871 - - - - - - 0.755 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
23. zgc:101846 15202 1.611 - - - - - - 0.833 - 0.778 zgc:101846
24. rab10 ENSDARG00000046106 15618 1.608 - 0.766 - - - - 0.842 - - RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
25. wu:fk48d07 wu:fk48d07 13245 1.602 - - - - - - 0.858 - 0.744
26. rhoaa ENSDARG00000026845 6900 1.575 - - - - - - 0.873 - 0.702 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
27. rbbp5 ENSDARG00000042147 702 1.569 0.715 - - 0.854 - - - - - retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
28. msi1 ENSDARG00000010710 2634 1.566 - - 0.705 0.861 - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
29. igdcc3 ENSDARG00000075158 1921 1.564 - - - - - - - 0.821 0.743 immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
30. brd1b ENSDARG00000051798 1712 1.563 - - - 0.854 - - - - 0.709 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
31. C22H6orf89 C22H6orf89 1076 1.563 - - - - - - 0.832 0.731 -
32. psma8 ENSDARG00000010965 8321 1.556 - - - - - 0.767 0.789 - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
33. rtca ENSDARG00000002215 3558 1.515 - - - 0.803 - - - - 0.712 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
34. LRRC8A LRRC8A 406 1.507 - - - 0.805 - - - - 0.702
35. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 1.494 0.773 - - - - - - 0.721 - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
36. ppp5c ENSDARG00000034313 8794 1.488 - 0.711 - - - - 0.777 - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
37. ZNF646 ENSDARG00000061424 1549 1.486 - - - 0.745 - - - - 0.741 zinc finger protein 646 [Source:ZFIN;Acc:ZDB-GENE-160627-3]
38. si:dkey-114c15.7 237 1.485 0.723 - - - - - - 0.762 - si:dkey-114c15.7
39. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.479 - 0.745 - - - - - - 0.734 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
40. C1H7orf55 C1H7orf55 2552 1.477 - - - 0.777 - - - - 0.700
41. isoc1 ENSDARG00000060069 1621 1.474 - - - - - - - 0.771 0.703 isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
42. vps41 ENSDARG00000063573 581 1.46 - - - - - 0.737 - 0.723 - vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6671]
43. EIF4G1 EIF4G1 19676 1.452 - - - - - - 0.742 - 0.710
44. arhgef2 ENSDARG00000075819 2173 1.452 - - 0.726 - - - - - 0.726 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
45. nvl ENSDARG00000025605 497 1.437 0.706 - - 0.731 - - - - - nuclear VCP-like [Source:ZFIN;Acc:ZDB-GENE-040426-2871]
46. hccsa hccsa 869 1 - 1.000 - - - - - - -
47. MRPL42 ENSDARG00000079391 1403 1 - 1.000 - - - - - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
48. CHCHD3 CHCHD3 1425 1 - 1.000 - - - - - - -
49. nit2 ENSDARG00000017590 1393 1 - 1.000 - - - - - - - nitrilase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-65]
50. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 1 - 1.000 - - - - - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
51. rmi1 ENSDARG00000041376 674 1 - 1.000 - - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
52. dact1 ENSDARG00000101635 1303 1 - 1.000 - - - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
53. decr1 ENSDARG00000003869 1344 1 - 1.000 - - - - - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
54. si:dkey-197c15.6 ENSDARG00000079401 745 1 - 1.000 - - - - - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
55. TMEM200B TMEM200B 554 1 - 1.000 - - - - - - -
56. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1 - 1.000 - - - - - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
57. rasef ENSDARG00000076250 1359 1 - 1.000 - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
58. gulp1a ENSDARG00000001733 1206 1 - 1.000 - - - - - - - GULP, engulfment adaptor PTB domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-21]
59. NUAK1_1 NUAK1_1 1782 1 - 1.000 - - - - - - -
60. ercc6l ENSDARG00000002479 1535 1 - 1.000 - - - - - - - excision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
61. dub ENSDARG00000059774 1026 1 - 1.000 - - - - - - - duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]
62. TMPPE ENSDARG00000036059, ENSDARG00000114955 567 1 - 1.000 - - - - - - - transmembrane protein with metallophosphoesterase domain [Source:ZFIN;Acc:ZDB-GENE-061013-104]
63. STMN3 ENSDARG00000038465 1009 1 - 1.000 - - - - - - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
64. MED17 ENSDARG00000006345 779 1 - 1.000 - - - - - - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
65. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1 - 1.000 - - - - - - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
66. nanos1 ENSDARG00000109337 2494 1 - 1.000 - - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
67. lims2 ENSDARG00000014976 1248 0.999 - 0.999 - - - - - - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
68. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 0.999 - 0.999 - - - - - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
69. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 0.999 - 0.999 - - - - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
70. FAM3D ENSDARG00000091625 1392 0.999 - 0.999 - - - - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
71. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.999 - 0.999 - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
72. RABGAP1 ENSDARG00000098967 933 0.999 - 0.999 - - - - - - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
73. acvr2ab ENSDARG00000104700 1569 0.999 - 0.999 - - - - - - - activin A receptor type 2Ab [Source:ZFIN;Acc:ZDB-GENE-120215-23]
74. rad21a_1 ENSDARG00000006092 4482 0.999 - 0.999 - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
75. creg1 ENSDARG00000105154 843 0.999 - 0.999 - - - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
76. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.999 - 0.999 - - - - - - - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
77. SERP1 ENSDARG00000076223 2528 0.999 - 0.999 - - - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
78. cpe ENSDARG00000055874, ENSDARG00000116033 2981 0.999 - 0.999 - - - - - - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
79. PHLPP1 ENSDARG00000078694 2466 0.999 - 0.999 - - - - - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
80. rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 0.999 - 0.999 - - - - - - - retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]
81. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 0.998 - 0.998 - - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
82. riok3 ENSDARG00000042751 3163 0.998 - 0.998 - - - - - - - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
83. dyrk1b ENSDARG00000070187 2777 0.998 - 0.998 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
84. me3 ENSDARG00000002305 3305 0.998 - 0.998 - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
85. dpp4 ENSDARG00000079420 1286 0.998 - 0.998 - - - - - - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
86. med10 ENSDARG00000070623 5134 0.998 - 0.998 - - - - - - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
87. ndufa7 ENSDARG00000036684 6051 0.998 - 0.998 - - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
88. surf6 ENSDARG00000035427 1695 0.998 - 0.998 - - - - - - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
89. murca murca 6614 0.998 - 0.998 - - - - - - -
90. trappc3 ENSDARG00000045364 1021 0.997 - - - - - - 0.997 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
91. CABZ01081490.1 ENSDARG00000111653 11892 0.997 - 0.997 - - - - - - -
92. atp1b3b ENSDARG00000042837 5163 0.997 - 0.997 - - - - - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
93. cnot6 cnot6 7029 0.997 - 0.997 - - - - - - -
94. fbl ENSDARG00000053912 5891 0.996 - 0.996 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
95. pkn1 pkn1 1510 0.996 - - - - - - 0.996 - -
96. nfe2l3 ENSDARG00000019810 3682 0.996 - 0.996 - - - - - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
97. rassf1 ENSDARG00000004840 1248 0.996 - - - - - - 0.996 - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
98. mapk8ip2 ENSDARG00000063157 467 0.996 - - - - - - 0.996 - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
99. txndc17 ENSDARG00000058079 3533 0.996 - 0.996 - - - - - - - thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
100. nlk1 ENSDARG00000006566 1123 0.996 - - - - - - 0.996 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]

There are 971 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA