Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for stac3

Gene Name Gene ID Reads Annotation
stac3 ENSDARG00000098883 1765 SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]










Genes with expression patterns similar to stac3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stac3 ENSDARG00000098883 1765 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
2. txlnbb ENSDARG00000076241 6396 5.631 0.871 0.893 0.700 - - 0.828 0.862 0.736 0.741 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
3. klhl40a ENSDARG00000039052 2537 4.896 0.811 0.861 0.714 0.803 - 0.825 0.882 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
4. hhatla ENSDARG00000039051 6598 4.895 0.832 0.887 0.728 - - - 0.908 0.787 0.753 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
5. srl ENSDARG00000104587 11126 4.869 0.815 0.913 0.726 0.717 - - 0.949 0.749 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
6. tnnt2d ENSDARG00000002988 7590 4.77 0.835 0.780 - - - 0.702 0.911 0.765 0.777 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
7. CR847973.1 ENSDARG00000115516 8754 4.742 0.771 0.793 - - - 0.827 0.902 0.706 0.743
8. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.732 0.815 0.725 0.720 - - 0.831 0.910 - 0.731 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
9. NRAP ENSDARG00000009341 3565 4.27 0.831 0.885 - 0.741 - 0.903 0.910 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
10. tgm2a ENSDARG00000070157 4516 4.254 0.911 - 0.826 - - 0.898 0.917 - 0.702 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
11. trdn ENSDARG00000041779 4283 4.161 0.845 0.842 0.764 - - 0.821 0.889 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
12. BX294434.1 ENSDARG00000061272 6493 4.051 0.852 0.839 0.712 - - - 0.915 - 0.733 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
13. cap2 ENSDARG00000104478 3266 4.018 0.904 0.759 - - - 0.764 0.854 - 0.737 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
14. EHBP1L1 EHBP1L1 2500 3.988 0.776 0.822 0.743 - - 0.744 0.903 - -
15. tnnt3a ENSDARG00000030270 112506 3.986 0.879 - 0.811 - - 0.787 0.734 - 0.775 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
16. FHOD3_1 FHOD3_1 983 3.93 0.794 0.761 0.701 - - 0.790 0.884 - -
17. cfl2 ENSDARG00000014106 8051 3.898 0.755 0.867 0.714 0.761 - - 0.801 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
18. asb5b ENSDARG00000053222 1207 3.888 0.750 0.802 - 0.704 - 0.777 0.855 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
19. txnipb ENSDARG00000070000 2365 3.861 0.711 0.761 - - - 0.733 0.948 - 0.708 thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
20. alpk2 ENSDARG00000079637 1483 3.839 0.755 0.725 0.720 - - 0.810 0.829 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
21. tpma ENSDARG00000033683 752432 3.78 0.845 - 0.749 0.702 - 0.724 0.760 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
22. atp2a1 ENSDARG00000020574 291561 3.755 0.876 - 0.721 - - 0.709 0.736 - 0.713 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
23. nexn ENSDARG00000057317 10972 3.506 0.921 - 0.716 - - 0.918 0.951 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
24. myod1 ENSDARG00000030110 6019 3.488 0.789 0.851 - - - 0.932 0.916 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
25. PTPLA PTPLA 4044 3.476 0.883 0.891 - - - 0.842 0.860 - -
26. sptb ENSDARG00000030490 7128 3.464 0.842 0.857 - - - 0.846 0.919 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
27. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.454 0.829 0.934 - - - 0.846 0.845 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
28. zgc:92518 ENSDARG00000016343 3837 3.442 0.860 - 0.769 - - 0.897 0.916 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
29. sh3bgr ENSDARG00000021633 3498 3.418 0.863 0.916 - - - 0.726 0.913 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
30. zgc:158296 ENSDARG00000070923 3935 3.403 - 0.938 - - - 0.844 0.889 - 0.732 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
31. prx ENSDARG00000017246 6183 3.371 0.839 0.828 - - - - 0.930 0.774 - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
32. chrna1 ENSDARG00000009021 2931 3.37 0.853 0.787 - - - 0.846 0.884 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
33. cacng1 cacng1 3118 3.368 0.824 0.897 - - - 0.845 0.802 - -
34. pbxip1a ENSDARG00000071015 4960 3.356 0.787 0.881 - - - - 0.885 0.803 - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
35. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.34 0.827 0.843 - - - - 0.943 - 0.727 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
36. CR392006.1 CR392006.1 1401 3.339 0.744 0.831 - - - 0.856 0.908 - -
37. xirp2a ENSDARG00000071113 7113 3.338 0.854 0.862 - - - 0.750 0.872 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
38. myhc4 ENSDARG00000035438 1322 3.337 0.819 0.862 - - - 0.794 0.862 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
39. ITGB1BP2 ENSDARG00000030176 2472 3.334 0.849 0.858 - - - 0.808 0.819 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
40. TRIM63 TRIM63 1600 3.333 0.813 0.752 - - - 0.871 0.897 - -
41. ryr1b ENSDARG00000023797 5693 3.328 - 0.910 0.702 - - - 0.917 - 0.799 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
42. MUSTN1 MUSTN1 1882 3.314 0.806 0.875 - - - 0.720 0.913 - -
43. MYOT ENSDARG00000076312 1791 3.309 0.768 0.821 - - - 0.844 0.876 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
44. TENC1 TENC1 1729 3.298 0.785 0.820 - - - 0.816 0.877 - -
45. fitm1 ENSDARG00000056464 1759 3.295 0.821 0.813 - - - 0.809 0.852 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
46. tnnc1b ENSDARG00000037539 13945 3.29 - 0.869 0.708 - - 0.787 0.926 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
47. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 3.29 0.865 - 0.777 - - - 0.929 0.719 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
48. rp42-pen rp42-pen 3395 3.288 - 0.875 0.700 - - 0.840 0.873 - -
49. MYOM1 MYOM1 3870 3.287 0.806 0.820 - - - - 0.913 - 0.748
50. mybpc2b ENSDARG00000021265 9618 3.282 0.828 0.854 - - - - 0.840 - 0.760 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
51. ryr3 ENSDARG00000071331 6795 3.277 0.733 0.829 - - - 0.849 0.866 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
52. jph2 ENSDARG00000028625 6706 3.266 0.836 - - - - 0.809 0.883 - 0.738 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
53. gypc ENSDARG00000041546 1487 3.266 0.773 0.836 - - - 0.828 0.829 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
54. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 3.248 0.810 0.845 - - - 0.800 0.793 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
55. zgc:92113 1738 3.248 0.736 - - - - 0.826 0.940 - 0.746 zgc:92113
56. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.245 0.764 - 0.789 - - - 0.938 - 0.754 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
57. SYNPO2L SYNPO2L 6697 3.237 0.823 - - 0.752 - 0.884 - - 0.778
58. limch1a ENSDARG00000074275 2981 3.228 0.828 0.831 - - - 0.725 0.844 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
59. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.217 0.721 0.829 - - - 0.814 0.853 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
60. kcnma1a ENSDARG00000079840 2584 3.202 0.815 0.823 - - - 0.701 0.863 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
61. mlf1 ENSDARG00000077301 789 3.201 0.710 0.904 - - - 0.732 0.855 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
62. acta1b ENSDARG00000055618 195597 3.194 0.907 - 0.773 - - 0.804 0.710 - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
63. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 3.19 0.796 0.723 - - - 0.750 0.921 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
64. hsp90aa1.1 ENSDARG00000010478 47784 3.157 0.737 - - - - 0.831 0.871 0.718 - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
65. adss ENSDARG00000002071 5497 3.153 0.792 - 0.719 - - - 0.917 0.725 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
66. znf648 ENSDARG00000104823 1918 3.148 0.729 0.844 - - - 0.767 0.808 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
67. tomm34 ENSDARG00000001557 1874 3.144 0.704 0.767 - - - 0.787 0.886 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
68. sucla2 ENSDARG00000005359 5992 3.131 0.791 0.810 0.718 - - 0.812 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
69. bag3 ENSDARG00000039486 1087 3.125 0.815 0.717 - - - 0.800 0.793 - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
70. ablim2 ENSDARG00000055223 1934 3.116 0.764 - - - - 0.837 0.805 0.710 - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
71. vcl vcl 6667 3.112 0.824 0.848 0.738 0.702 - - - - -
72. myoz2a ENSDARG00000012311 1373 3.111 0.742 0.747 - - - - 0.881 - 0.741 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
73. MYOM3 2720 3.097 0.700 0.812 - - - 0.757 0.828 - - myomesin 3, transcript variant X2
74. IGFN1 IGFN1 5030 3.086 0.712 0.738 - 0.894 - - - - 0.742
75. tspan12 ENSDARG00000032389 419 3.068 0.708 0.705 - - - 0.828 0.827 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
76. SPEG SPEG 4017 3.065 0.714 - 0.712 0.710 - - 0.929 - -
77. ckmb ENSDARG00000040565 505935 3.065 0.772 - 0.804 0.724 - 0.765 - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
78. tmem161a ENSDARG00000012790 16094 3.053 0.859 - 0.717 - - - 0.702 - 0.775 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
79. si:ch211-32p8.1 si:ch211-32p8.1 3402 3.044 0.732 0.701 0.769 - - 0.842 - - -
80. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.043 0.802 - 0.726 - - 0.787 - - 0.728 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
81. ttna ttna 101197 2.973 0.772 - 0.768 - 0.701 - - - 0.732
82. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 2.966 0.705 0.710 - - - 0.735 0.816 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
83. mir133b_1 671 2.964 0.755 0.750 - - - 0.709 0.750 - - microRNA 133b
84. smtnl1 ENSDARG00000041257 7410 2.706 0.893 - - - - 0.916 0.897 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
85. pygma ENSDARG00000055518 15972 2.706 0.903 0.902 - - - - 0.901 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
86. smyd2b ENSDARG00000005629 8181 2.671 0.919 0.899 - - - 0.853 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
87. klhl41b ENSDARG00000006757 10762 2.662 0.853 - - - - 0.895 0.914 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
88. usp28 ENSDARG00000008880 1850 2.655 0.839 0.904 - - - - 0.912 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
89. AIMP1 ENSDARG00000060036 4136 2.64 0.867 0.893 - - - 0.880 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
90. chrnd ENSDARG00000019342 2728 2.608 0.818 0.891 - - - - 0.899 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
91. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.599 0.835 - - - - 0.853 0.911 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
92. murca murca 6614 2.593 0.887 - - 0.837 - 0.869 - - -
93. znf106a ENSDARG00000016651 6049 2.593 0.875 0.814 - - - - 0.904 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
94. jph1a ENSDARG00000058603 2852 2.59 - 0.875 - - - 0.824 0.891 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
95. DNAJA4 ENSDARG00000051762 5657 2.579 - 0.849 - - - 0.810 0.920 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
96. flncb ENSDARG00000018820 5595 2.577 0.848 - - - - 0.834 0.895 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
97. ntmt1 ENSDARG00000022399 5779 2.576 0.827 0.860 - - - - 0.889 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
98. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.572 0.794 0.843 - - - 0.935 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
99. srpk3 ENSDARG00000005916 1546 2.571 0.773 0.892 - - - - 0.906 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
100. CU638714.1 ENSDARG00000100303 2132 2.568 0.749 0.892 - - - - 0.927 - -

There are 1493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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