Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for st3gal5

Gene Name Gene ID Reads Annotation
st3gal5 ENSDARG00000037556, ENSDARG00000109884 662 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-1]










Genes with expression patterns similar to st3gal5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. st3gal5 ENSDARG00000037556, ENSDARG00000109884 662 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-1]
2. TRIM65 ENSDARG00000077098 991 1.573 - 0.742 - - - - 0.831 - - tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
3. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 1.569 - 0.743 - - - - 0.826 - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
4. march5l ENSDARG00000028559 943 1.563 0.710 - - - - - 0.853 - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
5. skiv2l2 760 1.553 - - - - - - 0.797 0.756 - superkiller viralicidic activity 2-like 2
6. BX511013.1 ENSDARG00000112403 1018 1.548 - 0.742 - - - - 0.806 - - uncharacterized LOC103908633 [Source:NCBI gene;Acc:103908633]
7. nfkbiab ENSDARG00000007693 1345 1.465 - - - - - 0.729 0.736 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
8. glud1b ENSDARG00000101074 189 1.45 0.733 - - - - - 0.717 - - glutamate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030828-1]
9. ly75 ENSDARG00000053113 196 0.925 - - - - - - 0.925 - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
10. sh3bp5la ENSDARG00000019160 441 0.92 - 0.920 - - - - - - - SH3-binding domain protein 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-2187]
11. homez homez 1875 0.91 - - - - - - 0.910 - -
12. atg4a ENSDARG00000014531 481 0.904 - - - - - - 0.904 - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
13. gro2 gro2 1404 0.891 - - - - - - 0.891 - -
14. med22 ENSDARG00000014148 1307 0.885 - - - - - - 0.885 - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
15. rbm42 ENSDARG00000039910 1111 0.883 0.883 - - - - - - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
16. tdrkh ENSDARG00000053474, ENSDARG00000115911 277 0.882 - - - - - - 0.882 - - tudor and KH domain containing [Source:ZFIN;Acc:ZDB-GENE-050327-81]
17. snai1a ENSDARG00000056995 1427 0.88 - - - - - - 0.880 - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
18. dhrs7b ENSDARG00000075726 251 0.876 - - - - - - 0.876 - - dehydrogenase/reductase (SDR family) member 7B [Source:ZFIN;Acc:ZDB-GENE-050417-277]
19. rhogb ENSDARG00000004301 358 0.875 - - - - - - 0.875 - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
20. dmbx1b ENSDARG00000002510 351 0.875 - - - - - - 0.875 - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
21. fam169aa ENSDARG00000059719, ENSDARG00000115913 474 0.873 - - - - - - 0.873 - - family with sequence similarity 169, member Aa [Source:ZFIN;Acc:ZDB-GENE-060825-117]
22. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 0.873 - - - - - - 0.873 - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
23. cdca5 ENSDARG00000044437 2041 0.869 - - - - - - 0.869 - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
24. BX927290.1 BX927290.1 389 0.868 - 0.868 - - - - - - -
25. cnp ENSDARG00000070822 649 0.867 - - - - - - 0.867 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
26. si:ch211-79l20.4 1305 0.867 - - - - - - 0.867 - - si:ch211-79l20.4, transcript variant X3
27. gfra4 gfra4 287 0.867 - - - - - - 0.867 - -
28. si:ch211-14a11.5 199 0.867 - - - - - - 0.867 - - si:ch211-14a11.5
29. bcl7ba ENSDARG00000111877 3696 0.866 - - - - - - 0.866 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
30. KLHL33 ENSDARG00000105343 219 0.866 0.866 - - - - - - - - kelch-like family member 33 [Source:ZFIN;Acc:ZDB-GENE-131016-4]
31. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.865 - - - - - - 0.865 - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
32. DMXL1 DMXL1 798 0.859 - - - - - - 0.859 - -
33. snrpb ENSDARG00000011125 11729 0.858 - - - - - - 0.858 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
34. xpo6 ENSDARG00000041217, ENSDARG00000112616 735 0.858 0.858 - - - - - - - - exportin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5912]
35. tnfaip3 ENSDARG00000027777 1066 0.858 - - - - - - 0.858 - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
36. rab4b ENSDARG00000012177 851 0.856 - - - - - - 0.856 - - RAB4B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040822-15]
37. guf1 ENSDARG00000029088 231 0.855 - - - - - - 0.855 - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
38. dact1 ENSDARG00000101635 1303 0.855 - - - - - - 0.855 - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
39. si:dkey-56e3.3 ENSDARG00000075194 491 0.855 - - - - - - 0.855 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
40. znf511 ENSDARG00000000760 446 0.854 - - - - - - 0.854 - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
41. igsf9b ENSDARG00000010408 786 0.853 - - - - - - 0.853 - - immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
42. shda ENSDARG00000094243 929 0.853 - - - - - - 0.853 - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
43. rnf8 ENSDARG00000044949 751 0.853 - - - - - - 0.853 - - ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]
44. PTDSS2 ENSDARG00000101018 881 0.852 - 0.852 - - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
45. cry2a cry2a 2728 0.85 - - - - - - 0.850 - -
46. si:dkeyp-117b11.2 ENSDARG00000076419 143 0.849 - - - - - - 0.849 - - si:dkeyp-117b11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-454]
47. mtap ENSDARG00000037261 610 0.848 - 0.848 - - - - - - - methylthioadenosine phosphorylase [Source:ZFIN;Acc:ZDB-GENE-040426-1505]
48. rnf144aa ENSDARG00000020600 768 0.848 - 0.848 - - - - - - - ring finger protein 144aa [Source:ZFIN;Acc:ZDB-GENE-041001-88]
49. LRRC10B 94 0.847 - - - - - - 0.847 - - leucine rich repeat containing 10B
50. atf5b ENSDARG00000077785 416 0.846 0.846 - - - - - - - - activating transcription factor 5b [Source:ZFIN;Acc:ZDB-GENE-030131-2637]
51. apc ENSDARG00000058868 2605 0.845 - - - - - - 0.845 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
52. fadd ENSDARG00000103021 142 0.845 - - - - - - 0.845 - - Fas (tnfrsf6)-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-070606-3]
53. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.843 - - - - - - 0.843 - -
54. lsm1 ENSDARG00000043177 767 0.842 - - - - - - 0.842 - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
55. b9d2 ENSDARG00000017385 424 0.841 - - - - - - 0.841 - - B9 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-90]
56. tfdp1b ENSDARG00000016304 3071 0.84 - - - - - - 0.840 - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
57. si:ch211-117m20.5 ENSDARG00000091996 7246 0.839 0.839 - - - - - - - - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
58. kitlga ENSDARG00000070917 155 0.839 - - - - - - 0.839 - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
59. CT956064.4 CT956064.4 541 0.838 - - - - - - 0.838 - -
60. RNF157 ENSDARG00000057481 215 0.837 - - - - - - 0.837 - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
61. FAM126B 588 0.837 - - - - - - 0.837 - - family with sequence similarity 126 member B
62. BX927351.1 ENSDARG00000096844 125 0.836 0.836 - - - - - - - -
63. nr6a1b ENSDARG00000014480 575 0.835 - - - - - - 0.835 - - nuclear receptor subfamily 6, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040724-202]
64. ORC2 ENSDARG00000101465 399 0.835 - - - - - - 0.835 - - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
65. arl4aa ENSDARG00000099918 1391 0.835 0.835 - - - - - - - - ADP-ribosylation factor-like 4aa [Source:ZFIN;Acc:ZDB-GENE-040426-1878]
66. pnp5b ENSDARG00000099802 551 0.833 - - - - - - 0.833 - - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
67. ftsjd1 ftsjd1 137 0.833 - - - - - - 0.833 - -
68. tmem57a 861 0.83 - - - - - - 0.830 - - transmembrane protein 57a
69. creg1 ENSDARG00000105154 843 0.83 - - - - - - 0.830 - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
70. limk1b ENSDARG00000003022 172 0.83 - - - - - - 0.830 - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
71. utp3 ENSDARG00000056720 922 0.829 - - - - - - 0.829 - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
72. prkar1ab ENSDARG00000101755 555 0.828 - - - - - - 0.828 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
73. cfp ENSDARG00000094451 211 0.828 - - - - - - 0.828 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
74. lef1 ENSDARG00000031894 492 0.828 0.828 - - - - - - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
75. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 0.827 - - - - - - 0.827 - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
76. slmapb ENSDARG00000020764, ENSDARG00000117032 112 0.826 - - - - - - 0.826 - - sarcolemma associated protein b [Source:ZFIN;Acc:ZDB-GENE-040426-809]
77. U2_4 U2_4 41 0.826 - - - - - - 0.826 - -
78. ephx1 ENSDARG00000042854 161 0.825 - 0.825 - - - - - - - epoxide hydrolase 1, microsomal (xenobiotic) [Source:ZFIN;Acc:ZDB-GENE-040426-913]
79. gtf2h1 ENSDARG00000026701 190 0.825 - - - - - - 0.825 - - general transcription factor IIH, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-164]
80. spi1a ENSDARG00000067797 113 0.825 - - - - - - 0.825 - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
81. bbox1 ENSDARG00000036135, ENSDARG00000113482 74 0.824 - - - - - - 0.824 - - butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 [Source:ZFIN;Acc:ZDB-GENE-050417-218]
82. si:ch73-299h12.6 ENSDARG00000101319 373 0.823 - - - - - - 0.823 - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]
83. ctsz ENSDARG00000043081 1073 0.822 - - - - - - 0.822 - - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
84. CABZ01087568.1 CABZ01087568.1 1487 0.822 - - - - - - 0.822 - -
85. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.82 - - - - - - 0.820 - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
86. ncbp2 ENSDARG00000014898 232 0.82 0.820 - - - - - - - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
87. fam120c ENSDARG00000019205 1365 0.819 - - - - - - 0.819 - - family with sequence similarity 120C [Source:ZFIN;Acc:ZDB-GENE-090313-228]
88. cers2a ENSDARG00000013704 4239 0.819 - - - - - - - 0.819 - ceramide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020808-2]
89. cyp46a2 cyp46a2 38 0.818 - - - - - - 0.818 - -
90. setd5 ENSDARG00000078576 1974 0.818 - - - - - - 0.818 - - SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
91. lypd6 ENSDARG00000004307 233 0.817 - - - - - - 0.817 - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
92. l3mbtl1b ENSDARG00000074346 120 0.816 - - - - - - 0.816 - - l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
93. aagab ENSDARG00000041170, ENSDARG00000117041 1042 0.816 - - - - - - 0.816 - - alpha and gamma adaptin binding protein [Source:ZFIN;Acc:ZDB-GENE-040718-120]
94. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 0.815 - - - - - - 0.815 - - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
95. actr6 ENSDARG00000021370 650 0.815 - - - - - - 0.815 - - ARP6 actin related protein 6 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3543]
96. SLC35A2 ENSDARG00000058990 289 0.815 - - - - - - 0.815 - - solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
97. rbm4.1 ENSDARG00000036386 625 0.814 - - - - - - 0.814 - - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
98. paxip1 ENSDARG00000005606 1417 0.814 - - - - - - 0.814 - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
99. sf3b2 ENSDARG00000018049 4675 0.814 - - - - - - 0.814 - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
100. cpa6 ENSDARG00000012013 73 0.813 - 0.813 - - - - - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]

There are 501 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA