Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ssrp1a

Gene Name Gene ID Reads Annotation
ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]










Genes with expression patterns similar to ssrp1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
2. carm1 ENSDARG00000018698 5599 3.169 0.972 - - - 0.778 - - 0.706 0.713 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
3. fzd3a ENSDARG00000021664 1958 3.101 - - - 0.747 0.731 - - 0.887 0.736 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
4. srsf5b ENSDARG00000027734 6996 2.563 0.949 - - - - 0.710 0.904 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
5. klc2 3058 2.56 - - - 0.703 - - 0.977 0.880 - kinesin light chain 2
6. max ENSDARG00000024844 6035 2.456 - - - 0.825 - - - 0.833 0.798 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
7. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 2.452 - - - 0.785 - - - 0.900 0.767 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
8. psmd7 ENSDARG00000102417 4732 2.425 - 0.747 - - - - 0.932 - 0.746 proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
9. LDLRAD4 LDLRAD4 1237 2.424 - - - 0.774 - - - 0.892 0.758
10. kpna2 ENSDARG00000038066 7954 2.409 0.945 - - - - - - 0.700 0.764 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
11. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 2.405 - 0.722 - - - - - 0.910 0.773 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
12. lmnb2 ENSDARG00000101624 11304 2.386 - - 0.882 - - - 0.733 - 0.771 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
13. Sep-06 Sep-06 5465 2.37 - 0.802 - - - - - 0.866 0.702
14. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 2.364 - 0.708 - - - - 0.945 - 0.711 COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
15. hmgb3a ENSDARG00000056725 15668 2.356 - 0.700 - - - - - 0.933 0.723 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
16. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 2.348 0.862 - 0.700 - - - - - 0.786 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
17. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.342 - - - 0.720 - - - 0.898 0.724 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
18. rrm1 ENSDARG00000014017 7296 2.328 - - - 0.758 - - - 0.851 0.719 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
19. foxp1b ENSDARG00000014181 2594 2.325 - - - 0.716 - - - 0.895 0.714 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
20. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.316 - - - 0.731 0.777 - - - 0.808 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
21. cbx3a ENSDARG00000003860 4922 2.296 - 0.752 - 0.808 - - - - 0.736 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
22. MDC1 ENSDARG00000086764 1851 2.289 - 0.785 - 0.779 - 0.725 - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
23. lsm7 ENSDARG00000058328 7191 2.263 - - - - - - 0.848 0.701 0.714 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
24. magoh ENSDARG00000038635, ENSDARG00000109837 2880 2.218 - - - - 0.729 0.767 - - 0.722 mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
25. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 1.949 0.981 - - - - - 0.968 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
26. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.947 0.959 - - - - - 0.988 - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
27. gnb1b_1 ENSDARG00000104372 3728 1.946 - - 0.967 - - - 0.979 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
28. CABZ01079427.1 CABZ01079427.1 1682 1.939 0.978 - - - - - 0.961 - -
29. C7H16orf87 C7H16orf87 5197 1.93 0.981 - 0.949 - - - - - -
30. laptm4a ENSDARG00000006397 1698 1.922 - - 0.948 - - - 0.974 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
31. atl3 ENSDARG00000004270 2806 1.921 0.972 - - - - - 0.949 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
32. dhdds ENSDARG00000039851 1135 1.916 - - 0.948 - - - 0.968 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
33. krcp ENSDARG00000040224 5961 1.904 0.961 - - - - - 0.943 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
34. cdk16_1 ENSDARG00000032072 2031 1.893 - - - - - - 0.984 0.909 - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
35. zgc:63587 ENSDARG00000017140 8399 1.892 0.961 - - - - - 0.931 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
36. fbln2 ENSDARG00000015156 1694 1.888 0.948 - - - - - 0.940 - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
37. gabarapl2 ENSDARG00000027200 5120 1.876 0.948 - 0.928 - - - - - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
38. FAM110D FAM110D 3632 1.875 0.917 - - - - - 0.958 - -
39. get4 ENSDARG00000024398 1818 1.848 0.987 - - - - - - 0.861 - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
40. phf12a ENSDARG00000074303 1025 1.842 0.984 - - - - - - 0.858 - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
41. ghitm 1443 1.84 0.986 - - - - - - 0.854 - growth hormone inducible transmembrane protein
42. si:ch211-113a14.18 ENSDARG00000051735 1253 1.839 - - 0.966 - - - - 0.873 - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
43. CPT1A CPT1A 4004 1.836 0.917 - 0.919 - - - - - -
44. ppm1g ENSDARG00000075559 6516 1.814 - - - - - - 0.926 0.888 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
45. creb1a ENSDARG00000053586 5068 1.81 - - 0.970 - - - - - 0.840 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
46. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.809 0.980 - - - - - - 0.829 - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
47. yth2 yth2 3716 1.805 - - 0.964 - - - - 0.841 -
48. arf6b ENSDARG00000052928 4585 1.804 0.964 - - - - - - 0.840 - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
49. mapre1b ENSDARG00000002659 9119 1.802 - - 0.973 - - - - - 0.829 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
50. ncapg2 ENSDARG00000060023 993 1.797 - - - 0.831 - - 0.966 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
51. safb ENSDARG00000020467 5608 1.795 - - - - - - 0.966 - 0.829 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
52. eif2s1b ENSDARG00000052178 11961 1.783 0.865 - 0.918 - - - - - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
53. ppp3r1b ENSDARG00000069360 2814 1.779 0.934 - - - - - - 0.845 - protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b [Source:ZFIN;Acc:ZDB-GENE-040912-18]
54. prim1 ENSDARG00000040163 909 1.776 - - - 0.798 - - 0.978 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
55. vars ENSDARG00000044575 1367 1.759 0.983 0.776 - - - - - - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
56. whsc1 1701 1.759 0.991 - - - - - - - 0.768 Wolf-Hirschhorn syndrome candidate 1
57. elavl3 ENSDARG00000014420 8644 1.758 0.961 - - 0.797 - - - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
58. tmem56b ENSDARG00000098224 1524 1.757 - - - - - - 0.929 0.828 - transmembrane protein 56b [Source:ZFIN;Acc:ZDB-GENE-041010-90]
59. cbx2 ENSDARG00000044938 1576 1.754 - - - 0.790 - - 0.964 - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
60. cadm1a ENSDARG00000031075 2484 1.753 - - - 0.802 - - 0.951 - - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
61. gipc1 ENSDARG00000104483 2913 1.75 - - - 0.847 - - - 0.903 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
62. armc1l ENSDARG00000020887 1219 1.747 - - - - - 0.770 0.977 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
63. BX682552.2 BX682552.2 1427 1.747 0.984 - - - - - - 0.763 -
64. srrm2 ENSDARG00000037965 1967 1.746 - - - 0.776 - - 0.970 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
65. AL929007.1 AL929007.1 3649 1.744 0.985 0.759 - - - - - - -
66. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.743 0.978 - - - - - - - 0.765 LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
67. plxna4 ENSDARG00000019328 782 1.739 - - - - - - 0.972 - 0.767 plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
68. arl8a ENSDARG00000078686 4379 1.737 0.963 - - - - - - - 0.774 ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
69. nr2f1b ENSDARG00000017168 1487 1.736 0.988 - - 0.748 - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
70. hnrpkl ENSDARG00000007034 4660 1.734 - - - - - 0.753 0.981 - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
71. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.732 0.959 - - - - - - - 0.773 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
72. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.73 0.989 - - 0.741 - - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
73. hnrnpm ENSDARG00000061735 19428 1.727 0.962 - - - - - - - 0.765 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
74. tob1b ENSDARG00000021372 7048 1.725 0.934 0.791 - - - - - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
75. emc6 ENSDARG00000035282 4981 1.725 - 0.808 - - - - 0.917 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
76. uhrf1 ENSDARG00000103409 3282 1.722 - - - - 0.742 - 0.980 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
77. fzr1 fzr1 2984 1.72 - - - - - 0.755 0.965 - -
78. AL844567.1 AL844567.1 1605 1.719 - - - - - - 0.976 - 0.743
79. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.717 0.980 - - - - - - - 0.737 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
80. TAF2 ENSDARG00000102307 1401 1.714 - - - 0.741 - - 0.973 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
81. mrps7 ENSDARG00000101622 889 1.714 - 0.742 - - - - 0.972 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
82. papolg ENSDARG00000012141 1445 1.713 - - - 0.741 - - 0.972 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
83. top2a ENSDARG00000024488 4273 1.712 - - - - - - - 0.885 0.827 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
84. ik ENSDARG00000004161 3132 1.711 - - - 0.732 - - 0.979 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
85. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.71 - - - - - - 0.912 0.798 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
86. tmed1b ENSDARG00000017255 2238 1.71 0.979 0.731 - - - - - - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
87. marcksa ENSDARG00000004049 2518 1.71 - - - 0.911 - - - - 0.799 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
88. cltcb ENSDARG00000090716 5544 1.71 0.961 0.749 - - - - - - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
89. atp5ia 4773 1.706 0.980 - - - - 0.726 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
90. nmt1a ENSDARG00000052966 5918 1.705 - 0.781 - - - - 0.924 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
91. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.704 - - - - - - 0.988 - 0.716 DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
92. crtap ENSDARG00000018010 7722 1.703 0.906 - - - - - 0.797 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
93. srsf2a ENSDARG00000057484 25721 1.703 0.766 - - - - - 0.937 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
94. eef2a.1 ENSDARG00000042094 1781 1.703 0.986 0.717 - - - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
95. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.7 - - - 0.734 - - 0.966 - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
96. rpz2 ENSDARG00000091215 765 1.699 - - - - - 0.735 0.964 - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
97. tctex1d1 ENSDARG00000103545 409 1.699 0.986 - - - - 0.713 - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
98. eftud2 ENSDARG00000012261 3081 1.698 - - - - - - 0.983 - 0.715 elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
99. MARK4 ENSDARG00000024966 3377 1.698 0.959 - - - - - - - 0.739 microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
100. rbb4 rbb4 15541 1.698 0.883 - - - - - - - 0.815

There are 1955 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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