Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ssr3_1

Gene Name Gene ID Reads Annotation
ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]










Genes with expression patterns similar to ssr3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
2. CABZ01080098.1 ENSDARG00000110680 10942 2.391 0.888 - - - - - 0.719 - 0.784
3. man1b1 man1b1 3294 2.327 - 0.792 - - - - 0.830 - 0.705
4. pon1 ENSDARG00000032496 1375 2.291 0.872 - - - - - 0.716 - 0.703 paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
5. kcnk6 ENSDARG00000007383 1650 2.289 - 0.777 - - - 0.712 0.800 - - potassium channel, subfamily K, member 6 [Source:ZFIN;Acc:ZDB-GENE-050309-213]
6. slc38a7 ENSDARG00000012002 2219 2.28 0.766 0.761 - - - - 0.753 - - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
7. sec61b ENSDARG00000076568 11859 2.18 0.734 - - - - 0.713 0.733 - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
8. tead3a ENSDARG00000074321 2240 1.75 0.851 0.899 - - - - - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
9. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.742 0.870 0.872 - - - - - - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
10. emc8 ENSDARG00000017093 1947 1.721 0.891 0.830 - - - - - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
11. pon3 pon3 1146 1.714 - 0.828 - - - - 0.886 - -
12. si:ch211-232i5.3 ENSDARG00000086874 1256 1.711 - 0.857 - - - - 0.854 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
13. krt17 ENSDARG00000094041 7683 1.686 - 0.888 - - - - 0.798 - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
14. CLDN23 CLDN23 2002 1.681 0.872 - - - - - 0.809 - -
15. ywhabl ENSDARG00000040287 39045 1.673 0.825 - - - - - 0.848 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
16. GIT1 ENSDARG00000039489 1157 1.673 0.854 - - - - - 0.819 - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
17. sult6b1 ENSDARG00000086826 2070 1.662 0.866 - - - - - 0.796 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
18. cnih4 ENSDARG00000087759 3937 1.661 0.862 - - - - - 0.799 - - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
19. ssr2 ENSDARG00000005230 31940 1.656 0.880 - - - - - 0.776 - - signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
20. prkar1aa ENSDARG00000076128 6565 1.651 - 0.865 - - - - 0.786 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
21. nudt5 ENSDARG00000078073 779 1.647 0.863 0.784 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
22. ctsh ENSDARG00000041108 2873 1.643 - 0.877 - - - - 0.766 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
23. kank1 kank1 2430 1.642 0.835 - - - - - 0.807 - -
24. klf2b ENSDARG00000040432 1730 1.639 - 0.889 - - - - 0.750 - - Kruppel-like factor 2b [Source:ZFIN;Acc:ZDB-GENE-011109-2]
25. epn2 ENSDARG00000008377 5458 1.635 0.877 - - - - - - - 0.758 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
26. egfra ENSDARG00000013847 2912 1.634 0.866 0.768 - - - - - - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
27. snx11 ENSDARG00000052522 1030 1.633 0.874 - - - - - 0.759 - - sorting nexin 11 [Source:ZFIN;Acc:ZDB-GENE-041111-253]
28. sdf4 ENSDARG00000070682, ENSDARG00000109313 1623 1.632 - - 0.751 - - - 0.881 - - stromal cell derived factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2061]
29. clint1a ENSDARG00000025535 4965 1.632 0.817 - - - - - 0.815 - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
30. tmem258 ENSDARG00000078785 9578 1.631 0.807 - - - - - 0.824 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
31. reep3 reep3 2536 1.628 0.855 - - - - - 0.773 - -
32. si:ch211-214j24.10 ENSDARG00000045847 5145 1.627 0.919 0.708 - - - - - - - si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
33. tmem18 ENSDARG00000036704 1784 1.625 - 0.810 - - - - 0.815 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
34. lama5 ENSDARG00000058543 2782 1.623 0.901 - - - - - - 0.722 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
35. gcat ENSDARG00000005643 1104 1.621 - 0.912 - - - - 0.709 - - glycine C-acetyltransferase [Source:ZFIN;Acc:ZDB-GENE-060518-3]
36. chmp5b ENSDARG00000103718 1608 1.62 - - - - - - 0.847 - 0.773 charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
37. lamp2 ENSDARG00000014914 5035 1.619 - 0.835 - - - - 0.784 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
38. MIA ENSDARG00000052437, ENSDARG00000116215 1220 1.618 0.835 - - - - - 0.783 - - MIA SH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-081022-66]
39. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.617 0.870 - - - - - 0.747 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
40. gclm ENSDARG00000018953 1712 1.616 0.840 - - - - - 0.776 - - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
41. CLEC4A CLEC4A 1016 1.614 - 0.905 - - - - 0.709 - -
42. slc2a10 ENSDARG00000090820 637 1.612 - 0.864 - - - - - 0.748 - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
43. CU633744.1 CU633744.1 2074 1.612 - 0.816 - - - - 0.796 - -
44. myeov2 3351 1.612 0.846 - - - - - 0.766 - - myeloma overexpressed 2
45. pgrmc1 ENSDARG00000054172 5423 1.611 0.892 - - - - - 0.719 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
46. gclc ENSDARG00000013095 2146 1.607 - 0.829 - 0.778 - - - - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
47. lsr ENSDARG00000099291 881 1.602 - 0.752 - - - - 0.850 - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
48. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 1.599 - 0.866 - - - - 0.733 - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
49. npepl1 ENSDARG00000012871 3064 1.599 0.881 - - - - - 0.718 - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
50. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 1.598 - 0.806 - - - - 0.792 - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
51. sec23ip ENSDARG00000061413 804 1.598 0.857 - - - - - 0.741 - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]
52. si:ch211-286b5.5 ENSDARG00000096661 3136 1.595 - - - - - - 0.866 - 0.729 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
53. naga ENSDARG00000099313 2483 1.593 0.862 - - 0.731 - - - - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
54. CABZ01007794.1 CABZ01007794.1 14290 1.593 - 0.764 - - - - 0.829 - -
55. mgat1a ENSDARG00000012407 605 1.591 - 0.870 - 0.721 - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
56. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.588 0.886 - - - - - 0.702 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
57. si:ch211-166a6.5 ENSDARG00000079745 11111 1.585 0.865 0.720 - - - - - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
58. calrl2 calrl2 1677 1.584 - - - - - 0.723 0.861 - -
59. ATG4D ATG4D 648 1.583 - 0.818 - - - - 0.765 - -
60. ctsf ENSDARG00000063095 4564 1.58 0.867 - - - - - 0.713 - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
61. sec61al2 sec61al2 4551 1.579 - - - - - - 0.792 - 0.787
62. eppk1 ENSDARG00000096359 4315 1.572 - 0.840 - - - - 0.732 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
63. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 1.569 0.851 - - - - - 0.718 - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
64. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.569 - - - 0.711 - - 0.858 - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
65. arpc2 ENSDARG00000075989 22423 1.566 - 0.767 - - - - 0.799 - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
66. itgb1bp1 ENSDARG00000007169 2723 1.565 - - - - - 0.764 0.801 - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
67. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.563 0.754 0.809 - - - - - - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
68. rac2 ENSDARG00000038010 5837 1.563 - - - - 0.710 - 0.853 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
69. RABGAP1L ENSDARG00000061757 1967 1.561 0.791 - - - - - 0.770 - - RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]
70. stk38a ENSDARG00000019973 1343 1.557 0.844 - - - - - 0.713 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
71. gfpt2 ENSDARG00000044094 2503 1.554 0.781 - - - - - 0.773 - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
72. SH3D21 ENSDARG00000099448 1726 1.552 - - - - - - 0.784 0.768 - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
73. dad1 ENSDARG00000102105 14788 1.549 - 0.765 - - - - 0.784 - - defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
74. ppl ENSDARG00000101043 9196 1.548 - - - - - - 0.803 0.745 - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
75. TMEM54 TMEM54 1882 1.547 - 0.798 - - - - - 0.749 -
76. CFP ENSDARG00000094451 852 1.539 - - - 0.769 - - 0.770 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
77. s100a10b ENSDARG00000025254 25240 1.534 - - - - - - 0.801 0.733 - S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
78. CECR2 ENSDARG00000078310 903 1.531 - 0.824 - - - - 0.707 - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
79. CNDP1 CNDP1 6456 1.523 0.770 0.753 - - - - - - -
80. impad1 ENSDARG00000058114 667 1.523 - 0.790 - - - - 0.733 - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
81. CHDH ENSDARG00000100304 2257 1.523 - 0.815 - - - - 0.708 - - choline dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-120111-1]
82. slc37a4a ENSDARG00000038106 1375 1.523 - 0.823 - - - - 0.700 - - solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
83. aup1 ENSDARG00000092609 2431 1.522 - 0.760 - - - - 0.762 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
84. itgb1b.1 ENSDARG00000053232 4721 1.52 - - - - - 0.764 0.756 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
85. PARD3B_1 PARD3B_1 1735 1.517 - - - - - - 0.780 0.737 -
86. NID2 NID2 5282 1.514 0.792 - - - - - - 0.722 -
87. TMEM30B ENSDARG00000054122 1519 1.511 - - - - - - 0.790 0.721 - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
88. mob2a ENSDARG00000023214, ENSDARG00000111189 1740 1.507 - 0.782 - - - - 0.725 - - MOB kinase activator 2a [Source:ZFIN;Acc:ZDB-GENE-040718-56]
89. aqp12 ENSDARG00000043279 1881 1.506 - 0.723 - - - - 0.783 - - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
90. C21H5orf15 C21H5orf15 2318 1.5 - - - - - - 0.727 - 0.773
91. krt5 ENSDARG00000058371, ENSDARG00000112017 32812 1.498 - 0.763 - - - - - - 0.735 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
92. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.497 - 0.713 - - - - 0.784 - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
93. si:dkey-102c8.3 ENSDARG00000113572 4779 1.496 - - - - 0.729 - 0.767 - - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
94. QPCT ENSDARG00000089717 1383 1.496 0.746 - - - - - - 0.750 - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
95. sepw1 17630 1.496 - - - - - - 0.785 0.711 - selenoprotein W, 1
96. adpgk2 ENSDARG00000062785 8229 1.491 0.732 - - - - - - - 0.759 ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
97. si:dkey-30c15.10 ENSDARG00000088130 1174 1.489 - - - 0.745 - - 0.744 - - si:dkey-30c15.10 [Source:ZFIN;Acc:ZDB-GENE-060503-826]
98. huwe1 ENSDARG00000016782 6493 1.485 - - - - - 0.752 0.733 - - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
99. ptbp1a ENSDARG00000019362 6290 1.485 - - - - - - 0.784 - 0.701 polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
100. cyb5a ENSDARG00000098589 9430 1.484 - 0.742 - - - - 0.742 - - cytochrome b5 type A (microsomal) [Source:ZFIN;Acc:ZDB-GENE-040426-2148]

There are 1075 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA