Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ssr3

Gene Name Gene ID Reads Annotation
ssr3 ENSDARG00000014165, ENSDARG00000111483 1881 signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]










Genes with expression patterns similar to ssr3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssr3 ENSDARG00000014165, ENSDARG00000111483 1881 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
2. carhsp1 ENSDARG00000053129 2100 1.808 - 0.987 - - - 0.821 - - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
3. marveld2a ENSDARG00000025076 917 1.773 - 0.993 - - - 0.780 - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
4. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.729 - 0.982 - - - 0.747 - - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
5. march5l ENSDARG00000028559 943 1.723 - 0.988 - - - - 0.735 - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
6. mapk12a ENSDARG00000042021 1573 1.698 - 0.990 - - - - 0.708 - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
7. cask cask 3384 1.692 - 0.953 - - - 0.739 - - -
8. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.661 - 0.898 - - - - 0.763 - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
9. aldh4a1 ENSDARG00000038207 4639 1.617 - 0.884 - - - 0.733 - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
10. man2b1 ENSDARG00000001897 1042 1.576 - - - - - 0.774 0.802 - - mannosidase, alpha, class 2B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-52]
11. limk2 ENSDARG00000005104 2598 1.576 - - - - - 0.854 0.722 - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
12. abcf1 ENSDARG00000031795 8635 1.571 - 0.854 - - - 0.717 - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
13. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 1.545 - - - - - 0.787 0.758 - - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
14. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.539 - - - - - 0.754 0.785 - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
15. bcmo1a bcmo1a 402 1.536 - - - - - 0.803 0.733 - -
16. gpd1b ENSDARG00000043180 6002 1.535 - - - - - 0.772 0.763 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
17. serpinh1a ENSDARG00000075954 6488 1.532 - 0.741 - - - - 0.791 - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
18. KRT222 ENSDARG00000071518 767 1.518 - - - - - 0.785 0.733 - - keratin 222 [Source:ZFIN;Acc:ZDB-GENE-070912-343]
19. SLC22A31 ENSDARG00000078882 1474 1.517 - - - - - 0.781 0.736 - - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
20. loxl2b ENSDARG00000044074 1919 1.513 - - - - - 0.784 - 0.729 - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
21. CABZ01068208.1 ENSDARG00000112675 414 1.511 - - - - - 0.794 0.717 - -
22. mmp30 ENSDARG00000045887 1652 1.504 - - - - - 0.800 0.704 - - matrix metallopeptidase 30 [Source:ZFIN;Acc:ZDB-GENE-060421-5765]
23. si:ch211-233g6.8 si:ch211-233g6.8 1005 1.504 - - - - - - 0.803 0.701 -
24. akap7 ENSDARG00000043843 3596 1.5 - - - - - 0.728 0.772 - - A kinase (PRKA) anchor protein 7 [Source:ZFIN;Acc:ZDB-GENE-040724-128]
25. nfkbiab ENSDARG00000007693 1345 1.493 - - - - - 0.776 0.717 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
26. RALGDS RALGDS 992 1.473 - - - - - 0.740 0.733 - -
27. f5 ENSDARG00000055705 973 1.466 - - - - - 0.762 0.704 - - coagulation factor V [Source:ZFIN;Acc:ZDB-GENE-030131-5531]
28. txndc17 ENSDARG00000058079 3533 1.456 - - - - - 0.712 0.744 - - thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
29. zgc:56530 zgc:56530 6300 1.435 - - - - - - 0.726 0.709 -
30. sirt2 ENSDARG00000011488 5389 1.426 - - - - - 0.702 0.724 - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
31. nt5c3a ENSDARG00000058597 14299 1.418 - - - - - 0.705 0.713 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
32. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.406 - - - - - 0.703 0.703 - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
33. snx16 ENSDARG00000046072 931 0.996 - 0.996 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
34. KIF2A ENSDARG00000043571 1560 0.996 - 0.996 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
35. fndc3ba ENSDARG00000078179 2753 0.996 - 0.996 - - - - - - - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
36. ahr2 ENSDARG00000021833 762 0.995 - 0.995 - - - - - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
37. eps15l1a ENSDARG00000042670 1565 0.995 - 0.995 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
38. rock1 ENSDARG00000058993 2603 0.995 - 0.995 - - - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
39. CR293507.1 ENSDARG00000112572 3198 0.995 - 0.995 - - - - - - -
40. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.995 - 0.995 - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
41. uck2a ENSDARG00000006074 1554 0.995 - 0.995 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
42. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.995 - 0.995 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
43. STARD7 ENSDARG00000074858 889 0.994 - 0.994 - - - - - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
44. amot ENSDARG00000078335 1757 0.994 - 0.994 - - - - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
45. PDPR ENSDARG00000103288 711 0.994 - 0.994 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
46. CASK CASK 1750 0.994 - 0.994 - - - - - - -
47. CABZ01057907.1 CABZ01057907.1 1140 0.994 - 0.994 - - - - - - -
48. cdkn3 ENSDARG00000039130 1051 0.994 - 0.994 - - - - - - - cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
49. si:ch211-129c21.1 ENSDARG00000024775 371 0.994 - 0.994 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
50. lman2lb ENSDARG00000088663 1641 0.994 - 0.994 - - - - - - - lectin, mannose-binding 2-like b [Source:ZFIN;Acc:ZDB-GENE-060929-256]
51. SLC6A16_1 SLC6A16_1 1130 0.994 - 0.994 - - - - - - -
52. exoc1 ENSDARG00000043019 819 0.994 - 0.994 - - - - - - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
53. gtf2f1 ENSDARG00000032129 3041 0.994 - 0.994 - - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
54. klf6a ENSDARG00000029072 3758 0.994 - 0.994 - - - - - - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
55. gle1 ENSDARG00000043559 1362 0.994 - 0.994 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
56. si:dkey-22o12.7 si:dkey-22o12.7 1812 0.994 - 0.994 - - - - - - -
57. tgfb3 ENSDARG00000019367 2327 0.994 - 0.994 - - - - - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
58. zgc:113625 ENSDARG00000054160 276 0.994 - 0.994 - - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
59. hoxc10a ENSDARG00000070348 2323 0.994 - 0.994 - - - - - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
60. scube2 ENSDARG00000037362 2833 0.994 - 0.994 - - - - - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
61. hccs hccs 1758 0.994 - 0.994 - - - - - - -
62. FP236813.1 FP236813.1 1842 0.994 - 0.994 - - - - - - -
63. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.993 - 0.993 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
64. HEATR6 ENSDARG00000073686 241 0.993 - 0.993 - - - - - - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
65. glsb ENSDARG00000040705 1439 0.993 - 0.993 - - - - - - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
66. pon2 ENSDARG00000016856 1382 0.993 - 0.993 - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
67. CTIF ENSDARG00000090617 270 0.993 - 0.993 - - - - - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
68. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.993 - 0.993 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
69. C13H10orf54 C13H10orf54 450 0.993 - 0.993 - - - - - - -
70. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.993 - 0.993 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
71. prmt6 ENSDARG00000069706 484 0.993 - 0.993 - - - - - - - protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
72. C19H1orf85 C19H1orf85 1587 0.993 - 0.993 - - - - - - -
73. wu:fb12e11 wu:fb12e11 2332 0.993 - 0.993 - - - - - - -
74. sgce ENSDARG00000012138 912 0.993 - 0.993 - - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
75. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.993 - 0.993 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
76. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 0.993 - 0.993 - - - - - - - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
77. mxf ENSDARG00000026049 195 0.993 - 0.993 - - - - - - - myxovirus (influenza virus) resistance F [Source:ZFIN;Acc:ZDB-GENE-030721-9]
78. ENSDARG00000096553 ENSDARG00000096553 388 0.993 - 0.993 - - - - - - -
79. zc3h15 ENSDARG00000015889 3861 0.993 - 0.993 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
80. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 0.993 - 0.993 - - - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
81. lpar2b ENSDARG00000042561 1086 0.993 - 0.993 - - - - - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
82. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 0.993 - 0.993 - - - - - - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
83. LDLR LDLR 838 0.993 - 0.993 - - - - - - -
84. nucb2b ENSDARG00000036291 911 0.993 - 0.993 - - - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
85. lemd3 ENSDARG00000015824 2868 0.993 - 0.993 - - - - - - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
86. GRAMD1B GRAMD1B 311 0.992 - 0.992 - - - - - - -
87. akirin2 ENSDARG00000058729 13245 0.992 - 0.992 - - - - - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
88. SLC12A6 SLC12A6 883 0.992 - 0.992 - - - - - - -
89. pah ENSDARG00000020143 1551 0.992 - 0.992 - - - - - - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
90. kdm8 ENSDARG00000102512 321 0.992 - 0.992 - - - - - - - lysine (K)-specific demethylase 8 [Source:ZFIN;Acc:ZDB-GENE-040718-411]
91. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.992 - 0.992 - - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
92. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.992 - 0.992 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
93. si:ch211-133l11.10 ENSDARG00000005626 381 0.992 - 0.992 - - - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
94. SMARCA1 ENSDARG00000012776 673 0.992 - 0.992 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
95. ypel1 ENSDARG00000035630, ENSDARG00000112717 739 0.992 - 0.992 - - - - - - - yippee-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-41]
96. tmem110 497 0.992 - 0.992 - - - - - - - transmembrane protein 110
97. si:ch211-271g18.4 ENSDARG00000115564 197 0.992 - 0.992 - - - - - - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
98. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 0.992 - 0.992 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
99. farp1 ENSDARG00000074381 406 0.992 - 0.992 - - - - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
100. acmsd ENSDARG00000062549 201 0.992 - 0.992 - - - - - - - aminocarboxymuconate semialdehyde decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-103]

There are 865 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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