Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ssr1

Gene Name Gene ID Reads Annotation
ssr1 ENSDARG00000101627 151 signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]










Genes with expression patterns similar to ssr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssr1 ENSDARG00000101627 151 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
2. C11H1orf116 C11H1orf116 9 2 - - - - - 1.000 1.000 - -
3. scospondin ENSDARG00000067859 4 2 - - - - - 1.000 1.000 - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
4. PTPDC1_1 PTPDC1_1 12 1.992 - - - - - 0.992 1.000 - -
5. si:dkey-220o10.1 si:dkey-220o10.1 63 1.989 - - - - - 0.989 1.000 - -
6. CABZ01065246.2 CABZ01065246.2 45 1.986 - - - - - 0.986 1.000 - -
7. CABZ01087025.1 ENSDARG00000117232 10 1.872 - - - - - 0.872 1.000 - -
8. pou5f3 ENSDARG00000044774 212 1.759 - - - - 0.780 0.979 - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
9. PLEKHG3 72 1.743 - - - - - 1.000 0.743 - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
10. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 1.724 - - - - - 0.906 0.818 - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
11. urod ENSDARG00000006818 856 1.686 - 0.748 - - - 0.938 - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
12. add3b ENSDARG00000056250, ENSDARG00000114699 119 1.661 - - - - - 0.887 0.774 - - adducin 3 (gamma) b [Source:ZFIN;Acc:ZDB-GENE-080718-6]
13. C3H17orf53 C3H17orf53 191 1.644 - - - - - 0.799 0.845 - -
14. si:ch211-263m18.4 ENSDARG00000093353 27 1.602 - - - 0.799 - 0.803 - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
15. CABZ01064973.1 CABZ01064973.1 160 1.598 - - - - - 0.723 0.875 - -
16. hoxc13b ENSDARG00000113877 549 1.552 - - - - 0.765 0.787 - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
17. mctp2b ENSDARG00000073970 238 1.527 - - - 0.759 - 0.768 - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
18. F2RL2 ENSDARG00000090524 211 1.52 - 0.721 - - - 0.799 - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
19. CELA1_1 CELA1_1 104 1.476 - 0.711 - - - - 0.765 - -
20. csrp2bp 2642 1.424 - 0.707 - - - 0.717 - - - csrp2 binding protein
21. ARHGEF38 ENSDARG00000079377 9 1 - - - - - - 1.000 - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
22. CT737138.1 CT737138.1 26 1 - - - - - - 1.000 - -
23. kcne4 ENSDARG00000068257 13 1 - - - - - - 1.000 - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
24. adipoqb ENSDARG00000100086 5 1 - - - - - - 1.000 - - adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
25. BX649415.1 BX649415.1 5 1 - - - - - 1.000 - - -
26. tmem196b ENSDARG00000090140 20 1 - - - - - 1.000 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
27. ralgps1 ENSDARG00000068370 39 1 - - - - - - 1.000 - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
28. CT583679.1 CT583679.1 11 1 - - - - - 1.000 - - -
29. mxd ENSDARG00000023369 8 1 - - - - - 1.000 - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
30. THBS1 THBS1 6 1 - - - - - - 1.000 - -
31. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - - - 1.000 - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
32. neurod6a ENSDARG00000040008 17 1 - - - - - - 1.000 - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
33. ptprua ENSDARG00000092638 479 1 - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
34. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - 1.000 - - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
35. BX324132.5 BX324132.5 115 1 - - - - - - 1.000 - -
36. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - - - - 1.000 - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
37. BX547934.1 ENSDARG00000097061 35 1 - - - - - - 1.000 - -
38. CABZ01118004.1 ENSDARG00000117218 2 1 - - - - - 1.000 - - -
39. olfcg9 ENSDARG00000105189 1 1 - - - - - - 1.000 - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
40. htr1b ENSDARG00000053987 11 1 - - - - - - 1.000 - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
41. cdh15 ENSDARG00000068191, ENSDARG00000112512, ENSDARG00000116974 121 1 - - - - - - 1.000 - - cadherin 15, type 1, M-cadherin (myotubule) [Source:ZFIN;Acc:ZDB-GENE-030131-780]
42. CABZ01092722.1 CABZ01092722.1 2 1 - - - - - 1.000 - - -
43. zgc:113355 zgc:113355 2 1 - - - - - - 1.000 - -
44. SLC1A7 SLC1A7 3 1 - - - - - 1.000 - - -
45. si:ch211-108c6.2 14 1 - - - - - - 1.000 - - si:ch211-108c6.2
46. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - - - - - - 1.000 - -
47. crp1 ENSDARG00000071454 31 1 - - - - - - 1.000 - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
48. SLC5A10 ENSDARG00000074212 11 1 - - - - - - 1.000 - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
49. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - - - - 1.000 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
50. trpc2 trpc2 10 1 - - - - - 1.000 - - -
51. si:dkey-197d18.3 si:dkey-197d18.3 7 1 - - - - - 1.000 - - -
52. serpina10a ENSDARG00000005924 1177 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
53. rpn2 ENSDARG00000009724 322 1 - - - - - 1.000 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
54. GRIK2 ENSDARG00000113771 3 1 - - - - - - 1.000 - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
55. CABZ01041769.3 CABZ01041769.3 5 1 - - - - - - 1.000 - -
56. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 1 - - - - - - 1.000 - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
57. zymnd12 17 1 - - - - - - 1.000 - - zinc finger, MYND-type containing 12, transcript variant X1
58. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1 - - - - - - 1.000 - - H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
59. si:dkey-103k4.5 si:dkey-103k4.5 11 1 - - - - - - 1.000 - -
60. SLC22A7 SLC22A7 3 1 - - - - - 1.000 - - -
61. UBASH3B_1 UBASH3B_1 28 1 - - - - - - 1.000 - -
62. ccdc65 ENSDARG00000032005, ENSDARG00000115576 5 1 - - - - - - 1.000 - - coiled-coil domain containing 65 [Source:ZFIN;Acc:ZDB-GENE-030616-358]
63. gfra2b ENSDARG00000044015 5 1 - - - - - - 1.000 - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
64. itln3 ENSDARG00000003523 3 1 - - - - - 1.000 - - - intelectin 3 [Source:ZFIN;Acc:ZDB-GENE-090527-4]
65. CLTCL1 ENSDARG00000091618 0 1 - - - - - - 1.000 - - clathrin, heavy chain-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1029]
66. ugt5f1 ENSDARG00000054835 2 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide F1 [Source:ZFIN;Acc:ZDB-GENE-100406-6]
67. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - - - - - - 1.000 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
68. si:ch211-77g15.32 ENSDARG00000095362 1 1 - - - - - - 1.000 - - si:ch211-77g15.32 [Source:ZFIN;Acc:ZDB-GENE-070912-320]
69. kcnq1 ENSDARG00000059798 11 1 - - - - - - 1.000 - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
70. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 1 - - - - - 1.000 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
71. AL935181.2 AL935181.2 9 1 - - - - - - 1.000 - -
72. BX005085.3 ENSDARG00000103450 45 1 - - - - - 1.000 - - -
73. si:ch211-81a5.8 ENSDARG00000070972 59 1 - - - - - - 1.000 - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
74. CABZ01079442.1 CABZ01079442.1 1 1 - - - - - - 1.000 - -
75. gcgb ENSDARG00000040907 182 1 - - - - - - 1.000 - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
76. CR854827.2 ENSDARG00000097227 15 1 - - - - - - 1.000 - -
77. CR382281.1 ENSDARG00000100098 135 1 - - - - - - 1.000 - -
78. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - - - - 1.000 - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
79. si:ch211-215m21.11 si:ch211-215m21.11 2 1 - - - - - 1.000 - - -
80. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 1 - - - - - - 1.000 - - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
81. zgc:174696 ENSDARG00000110658 67 1 - - - - - 1.000 - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
82. BSN_2 BSN_2 1 1 - - - - - - 1.000 - -
83. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - - - 1.000 - -
84. si:ch73-15n24.1 ENSDARG00000079901 0 1 - - - - - - 1.000 - - si:ch73-15n24.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1323]
85. 5S_rRNA_23 5S_rRNA_23 2 1 - - - - - 1.000 - - -
86. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1 - - - - - 1.000 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
87. CR677591.1 CR677591.1 19 1 - - - - - 1.000 - - -
88. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - - 1.000 - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
89. si:rp71-10g3.1 si:rp71-10g3.1 6 1 - - - - - - 1.000 - -
90. SLC2A4RG SLC2A4RG 47 1 - - - - - 1.000 - - -
91. CCDC141 ENSDARG00000095675 94 1 - - - - - - 1.000 - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
92. C14H11orf80 C14H11orf80 1 1 - - - - - - 1.000 - -
93. uts1 ENSDARG00000014927 35 1 - - - - - - 1.000 - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
94. si:dkey-22i16.7 ENSDARG00000094910 47 1 - - - - - - 1.000 - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
95. si:dkey-9i23.6 ENSDARG00000094678 58 1 - - - - - 1.000 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
96. BX571881.1 BX571881.1 2 1 - - - - - 1.000 - - -
97. or109-5 ENSDARG00000102990 0 1 - - - - - - 1.000 - - odorant receptor, family D, subfamily 109, member 5 [Source:ZFIN;Acc:ZDB-GENE-070804-6]
98. CU467828.1 CU467828.1 0 1 - - - - - - 1.000 - -
99. iffo1a ENSDARG00000062976 5 1 - - - - - 1.000 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
100. CR790363.1 ENSDARG00000097364 145 1 - - - - - 1.000 - - -

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA