Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ssh2a

Gene Name Gene ID Reads Annotation
ssh2a ENSDARG00000088440 1149 slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]










Genes with expression patterns similar to ssh2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssh2a ENSDARG00000088440 1149 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
2. ikbkb ENSDARG00000079123 498 2.556 - 0.888 - - - - 0.783 - 0.885 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
3. mier1a ENSDARG00000041072 1690 2.497 - - - - - 0.998 - 0.706 0.793 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
4. CCDC106 CCDC106 1908 2.449 - - - - - - 0.715 0.839 0.895
5. dnajc5ab ENSDARG00000004836 2923 1.878 - - - - - 0.982 0.896 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
6. klf5a 1072 1.87 - 0.916 - - - 0.954 - - - Kruppel-like factor 5a
7. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 1.865 - - - - - 0.997 0.868 - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
8. RAB11FIP5 RAB11FIP5 626 1.85 - 0.853 - - - 0.997 - - -
9. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 1.839 - - - - - 0.985 0.854 - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
10. ssu72 ENSDARG00000031216 2350 1.838 - - - - - 0.995 0.843 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
11. cwc22 ENSDARG00000014008 2385 1.822 - - - - - 0.995 - - 0.827 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
12. zgc:153924 507 1.808 - - - - - 0.997 0.811 - - zgc:153924
13. gk5 ENSDARG00000062864 738 1.8 - - - - - 0.995 0.805 - - glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
14. phb2 phb2 3209 1.798 - - - - - 0.994 - - 0.804
15. klf11b ENSDARG00000013794 646 1.798 - 0.804 - - - 0.994 - - - Kruppel-like factor 11b [Source:ZFIN;Acc:ZDB-GENE-061103-82]
16. txnl4a ENSDARG00000036190 2048 1.791 - - - - - 0.997 - - 0.794 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
17. FBXL3 FBXL3 1769 1.786 - 0.909 - - - - - - 0.877
18. bcl6ab ENSDARG00000069295 656 1.783 - 0.796 - - - 0.987 - - - B-cell CLL/lymphoma 6a, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-7523]
19. MON1B_1 MON1B_1 697 1.759 - - - - - 0.997 0.762 - -
20. suv420h1 1810 1.754 - - - - - 0.993 - - 0.761 suppressor of variegation 4-20 homolog 1 (Drosophila)
21. zgc:173548 ENSDARG00000070048 558 1.743 - 0.811 - - - - - - 0.932 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
22. aldh16a1 ENSDARG00000037935 617 1.739 - - - - - - 0.832 - 0.907 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
23. ITCH ITCH 1226 1.738 - - - - - 0.991 0.747 - -
24. stk38a ENSDARG00000019973 1343 1.736 - - - - - 0.998 0.738 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
25. pigs ENSDARG00000017813 718 1.735 - - - - - 0.996 0.739 - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
26. GANAB_1 GANAB_1 685 1.729 - - - - - - 0.821 - 0.908
27. CABZ01057907.1 CABZ01057907.1 1140 1.727 - - - - - - 0.822 - 0.905
28. fam83b ENSDARG00000078309 318 1.725 - 0.844 - - - - 0.881 - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
29. tusc2b ENSDARG00000025340 2391 1.724 - - - - - - 0.824 - 0.900 tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
30. prc1a ENSDARG00000100918 1746 1.723 - 0.727 - - - 0.996 - - - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
31. pvrl1b 1645 1.718 - - - - - - 0.860 - 0.858 poliovirus receptor-related 1b
32. tctex1d2 ENSDARG00000054255 320 1.716 - 0.844 - - - - 0.872 - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
33. si:dkey-56e3.2 ENSDARG00000092551 835 1.716 - - - - - 0.956 0.760 - - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
34. tmem168a ENSDARG00000068705 498 1.713 - 0.861 - - - - 0.852 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
35. dopey1 438 1.713 - - - - - - 0.798 - 0.915 dopey family member 1, transcript variant X4
36. sulf2l sulf2l 4980 1.713 - 0.732 - - - 0.981 - - -
37. eef2a.1 ENSDARG00000042094 1781 1.71 - - - - - - - 0.797 0.913 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
38. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 1.705 - - - - - - 0.833 - 0.872 BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
39. rnf13 ENSDARG00000019438 1560 1.705 - - - - - 0.995 - 0.710 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
40. palm3 ENSDARG00000071215 1776 1.704 - - - - - 0.985 0.719 - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
41. col12a1a ENSDARG00000078322 1833 1.699 - 0.901 - - - - - - 0.798 collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
42. entpd2a.2 ENSDARG00000033953 389 1.688 - 0.874 - - - - 0.814 - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
43. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.688 - 0.717 - - - 0.971 - - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
44. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.687 - - - - - 0.980 - 0.707 - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
45. wu:fj29h11 ENSDARG00000096562 863 1.686 - 0.813 - - - - - - 0.873 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
46. abca1a ENSDARG00000074635 1085 1.686 - - - - - - 0.835 - 0.851 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
47. prdx4 ENSDARG00000069013 1150 1.683 - 0.804 - - - - - - 0.879 peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
48. daxx ENSDARG00000000729 734 1.678 - - - - - - 0.792 - 0.886 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
49. rnf121 ENSDARG00000060282 1809 1.677 - - - - - - 0.753 - 0.924 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
50. ankzf1 ENSDARG00000041904 917 1.676 - - - - - - 0.759 - 0.917 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
51. zgc:112964 ENSDARG00000101200 4751 1.671 - 0.758 - - - 0.913 - - - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
52. ezrb ENSDARG00000025091 2861 1.662 - - - - - - 0.825 - 0.837 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
53. tmprss13a ENSDARG00000100969 84 1.662 - 0.852 - - - - 0.810 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
54. CLDN23 CLDN23 2002 1.653 - - - - - 0.950 0.703 - -
55. CENPF ENSDARG00000055133 436 1.649 - - - - - - 0.743 - 0.906 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
56. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.642 - - - - - 0.937 0.705 - - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
57. CABZ01024770.1 CABZ01024770.1 150 1.64 - 0.852 - - - - 0.788 - -
58. C21H18orf25 C21H18orf25 800 1.638 - 0.741 - - - - - - 0.897
59. cwc25 ENSDARG00000003382 2134 1.633 - - - - - - 0.826 - 0.807 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
60. GPR112 GPR112 515 1.629 - 0.735 - - - - 0.894 - -
61. ctnnal1 ENSDARG00000018162 747 1.629 - - - - - - - 0.720 0.909 catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
62. cdan1 ENSDARG00000042261 658 1.626 - - - - - - - 0.731 0.895 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
63. taf5 ENSDARG00000018325 1363 1.621 - - - - - - 0.821 - 0.800 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
64. bcl2l10 ENSDARG00000026766 1426 1.62 - 0.774 - - - - 0.846 - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
65. hdac10 ENSDARG00000086458 676 1.61 - - - - - - 0.700 - 0.910 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
66. pspc1 ENSDARG00000006621 966 1.608 - - - - - - - 0.796 0.812 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
67. rbm45 ENSDARG00000063731 504 1.606 - 0.704 - - - - - - 0.902 RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
68. trim25l ENSDARG00000020863 292 1.602 - 0.780 - - - - 0.822 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
69. zfand6 ENSDARG00000098443 2507 1.6 - - - - - - 0.761 - 0.839 zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
70. nudt17 ENSDARG00000008014 479 1.594 - 0.746 - - - - 0.848 - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
71. otub1b ENSDARG00000011462 4329 1.593 - - - - - - 0.769 - 0.824 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
72. prpf4ba ENSDARG00000008784 936 1.592 - 0.733 - - - - - - 0.859 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
73. vhl ENSDARG00000070617 663 1.59 - 0.845 - - - - - 0.745 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
74. CABZ01081749.1 CABZ01081749.1 637 1.589 - 0.725 - - - - 0.864 - -
75. THEM6_1 ENSDARG00000103914 469 1.582 - 0.867 - - - - 0.715 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
76. pole ENSDARG00000058533, ENSDARG00000115430 381 1.581 - 0.810 - - - - - 0.771 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
77. riok1 ENSDARG00000016399 936 1.578 - 0.794 - - - - 0.784 - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
78. polr2k ENSDARG00000075616 2047 1.576 - - - - - - - 0.748 0.828 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
79. aqr ENSDARG00000016775 1581 1.576 - - - - - - 0.716 - 0.860 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
80. araf ENSDARG00000054533 1132 1.574 - 0.707 - - - - - - 0.867 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
81. mtfr2 ENSDARG00000060394 482 1.573 - - - - - - 0.846 0.727 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
82. MYO1D ENSDARG00000036863 768 1.573 - 0.839 - - - - - 0.734 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
83. srpr 5148 1.57 - - - - - - 0.719 - 0.851 signal recognition particle receptor (docking protein)
84. si:ch211-113a14.12 ENSDARG00000077456 1004 1.569 - 0.738 - - - - 0.831 - - si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]
85. MDFIC ENSDARG00000074223 781 1.567 - 0.813 - - - - 0.754 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
86. polr2gl ENSDARG00000056127 1771 1.563 - - - - - - 0.791 - 0.772 polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
87. tom1 ENSDARG00000104581 1457 1.562 - - - - - - 0.744 - 0.818 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
88. NUDT12 ENSDARG00000100813 378 1.55 - - - - - - 0.812 0.738 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
89. sult6b1 ENSDARG00000086826 2070 1.55 - 0.752 - - - - 0.798 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
90. CR954963.1 ENSDARG00000097153 1135 1.55 - - - - - - 0.826 0.724 -
91. fam134c fam134c 1550 1.549 - - - - - - 0.764 0.785 -
92. birc2 ENSDARG00000044619, ENSDARG00000117094 1376 1.548 - - - - - - 0.712 - 0.836 baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]
93. CFP ENSDARG00000094451 852 1.543 - - - - - - 0.715 - 0.828 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
94. ENSDARG00000095341 ENSDARG00000095341 488 1.536 - 0.721 - - - - 0.815 - -
95. CDPF1 ENSDARG00000095705 553 1.532 - 0.708 - - - - 0.824 - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
96. memo1 ENSDARG00000010823 1681 1.531 - 0.720 - - - - - - 0.811 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
97. zgc:136439 ENSDARG00000009267 720 1.527 - - - - - - 0.818 0.709 - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
98. palm1b ENSDARG00000007818 2128 1.518 - 0.723 - - - - - - 0.795 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
99. DTX2 ENSDARG00000032933, ENSDARG00000109243 909 1.517 - - - - - - 0.800 0.717 - deltex 2, E3 ubiquitin ligase [Source:ZFIN;Acc:ZDB-GENE-081022-150]
100. sh3glb2a ENSDARG00000008983 452 1.515 - 0.751 - - - - - 0.764 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]

There are 1977 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA