Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ssh1b

Gene Name Gene ID Reads Annotation
ssh1b ENSDARG00000010031 4 slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]










Genes with expression patterns similar to ssh1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssh1b ENSDARG00000010031 4 4 1.000 - 1.000 1.000 - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
2. SOX8 SOX8 22 2 1.000 - - - - 1.000 - - -
3. ciita ENSDARG00000090851 5 2 1.000 - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
4. si:dkey-217m5.3 si:dkey-217m5.3 22 2 1.000 - - - - 1.000 - - -
5. CU984579.1 ENSDARG00000116863 15 1.956 1.000 - - - - 0.956 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
6. CABZ01078481.1 CABZ01078481.1 6 1.884 1.000 - 0.884 - - - - - -
7. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 1.000 - - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
8. sycp1 ENSDARG00000003904 8 1.877 1.000 - - - - 0.877 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
9. si:dkey-267i17.3 si:dkey-267i17.3 4 1.857 1.000 - 0.857 - - - - - -
10. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.822 0.915 - - - - 0.907 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
11. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1.797 1.000 - 0.797 - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
12. si:ch211-170d12.2 si:ch211-170d12.2 1 1.72 1.000 - - 0.720 - - - - -
13. CCDC18 ENSDARG00000078822 5 1.72 1.000 - - 0.720 - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
14. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.713 1.000 - - 0.713 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
15. pax6l pax6l 54 1.583 - - 0.870 - - 0.713 - - -
16. FP103003.1_1 FP103003.1_1 6 1.55 - - 0.830 0.720 - - - - -
17. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
18. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
19. Metazoa_SRP_2 Metazoa_SRP_2 2 1 1.000 - - - - - - - -
20. KAZN_1 KAZN_1 13 1 1.000 - - - - - - - -
21. edn1 ENSDARG00000036912 74 1 1.000 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
22. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
23. zp2.5 ENSDARG00000086522 15 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
24. zgc:173652_1 4 1 - - - - - 1.000 - - - zgc:173652
25. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
26. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
27. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 1.000 - - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
28. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
29. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
30. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
31. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
32. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
33. GRIN3B GRIN3B 16 1 1.000 - - - - - - - -
34. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
35. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
36. GMEB2 ENSDARG00000093240 6 1 1.000 - - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
37. loxhd1b ENSDARG00000074638 6 1 1.000 - - - - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
38. pde5ab ENSDARG00000051915 18 1 - - - - - 1.000 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
39. CR936977.1 ENSDARG00000100144 4 1 - - - - - 1.000 - - -
40. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
41. CABZ01086292.1 CABZ01086292.1 1 1 - - - - - 1.000 - - -
42. si:ch73-299h12.1 ENSDARG00000102321 233 1 1.000 - - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
43. SNORD94 SNORD94 57 1 - - - - - 1.000 - - -
44. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
45. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
46. cntnap5a ENSDARG00000073920 39 1 - - - - - 1.000 - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
47. irgq2 ENSDARG00000068657 4 1 1.000 - - - - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
48. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 - - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
49. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
50. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
51. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
52. BX537277.3 ENSDARG00000117762 1 1 - - - - - 1.000 - - -
53. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - 1.000 - - -
54. muc13b ENSDARG00000079647 67 1 1.000 - - - - - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
55. CCDC134_1 CCDC134_1 200 1 1.000 - - - - - - - -
56. adck3 83 1 1.000 - - - - - - - - aarF domain containing kinase 3
57. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
58. nr2e1 ENSDARG00000017107 340 1 - - - - - 1.000 - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
59. BTBD17 BTBD17 53 1 - - - - - 1.000 - - -
60. DNAI2 DNAI2 6 1 - - - - - 1.000 - - -
61. has3 ENSDARG00000057210, ENSDARG00000116537 108 1 - - - - - 1.000 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
62. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
63. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
64. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1 1.000 - - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
65. EP400 ENSDARG00000100965 45 1 - - - - - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
66. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
67. ddit4 ENSDARG00000037618 37 1 - - - - - 1.000 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
68. si:dkey-21n8.3 si:dkey-21n8.3 5 1 1.000 - - - - - - - -
69. si:ch73-381f5.2 ENSDARG00000092723 1 1 1.000 - - - - - - - - si:ch73-381f5.2 [Source:ZFIN;Acc:ZDB-GENE-090311-25]
70. SNORD89 SNORD89 1 1 1.000 - - - - - - - -
71. si:ch211-13o20.1 si:ch211-13o20.1 30 1 1.000 - - - - - - - -
72. WNK3 WNK3 36 1 - - - - - 1.000 - - -
73. CT027800.1 CT027800.1 36 1 1.000 - - - - - - - -
74. BX571739.1 BX571739.1 45 1 1.000 - - - - - - - -
75. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
76. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
77. si:ch211-210h11.7 si:ch211-210h11.7 32 1 1.000 - - - - - - - -
78. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1 - - - - - 1.000 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
79. jakmip2 ENSDARG00000053547 32 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
80. si:dkey-85n7.8 ENSDARG00000095793 31 1 1.000 - - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
81. ddx26b 79 1 1.000 - - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
82. hyal3 ENSDARG00000036818 23 1 - - - - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
83. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
84. si:dkey-47k16.3 si:dkey-47k16.3 17 1 1.000 - - - - - - - -
85. ddx46 ENSDARG00000099458 24 1 - - - - - 1.000 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
86. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
87. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 1.000 - - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
88. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 1 - - - - - 1.000 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
89. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
90. cbln10 ENSDARG00000023157 17 1 - - - - - 1.000 - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
91. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
92. arhgap20 ENSDARG00000089326 10 1 - - - - - 1.000 - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
93. PGBD4 ENSDARG00000079328 20 1 - - - - - 1.000 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
94. CABZ01069081.1 CABZ01069081.1 16 1 1.000 - - - - - - - -
95. upp1 ENSDARG00000040869 2 1 1.000 - - - - - - - - uridine phosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-2]
96. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
97. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
98. or103-5 ENSDARG00000075128 1 1 - - - - - 1.000 - - - odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
99. FANCA ENSDARG00000098241 39 1 - - - - - 1.000 - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
100. si:ch211-188c16.1 ENSDARG00000077288 16 1 - - - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]

There are 565 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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