Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ssbp3b

Gene Name Gene ID Reads Annotation
ssbp3b ENSDARG00000030155 7163 single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]










Genes with expression patterns similar to ssbp3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssbp3b ENSDARG00000030155 7163 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
2. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 3.384 0.813 0.808 - - 0.871 - - - 0.892 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
3. hnrnpub ENSDARG00000004735 16496 3.34 - - - - - 0.888 0.869 0.771 0.812 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
4. znf207a ENSDARG00000015538 2630 3.235 - - 0.872 - 0.904 - 0.738 - 0.721 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
5. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 3.2 0.761 - - - - 0.906 0.740 - 0.793 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
6. stmn1b ENSDARG00000033655 9491 3.175 - - - - 0.879 0.818 0.724 - 0.754 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
7. GATAD2B ENSDARG00000005834 3855 3.124 - - 0.893 - - 0.756 0.705 - 0.770 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
8. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.081 - - - - 0.761 0.760 0.792 - 0.768 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
9. arnt2 ENSDARG00000103697 5731 2.594 - - - 0.995 - - 0.797 - 0.802 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
10. hmp19 2554 2.559 - - - 0.994 - 0.838 0.727 - - HMP19 protein
11. rbpjb ENSDARG00000052091 3122 2.533 - - - 0.994 - 0.702 0.837 - - recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
12. nova2 ENSDARG00000017673 7685 2.514 - - - - - - 0.735 0.905 0.874 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
13. hmgb3a ENSDARG00000056725 15668 2.494 - - - - - 0.720 0.853 - 0.921 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
14. znf292b ENSDARG00000043973 3791 2.466 - - 0.940 - - - 0.771 - 0.755 zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
15. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.462 - - 0.852 - - 0.827 0.783 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
16. cd99l2 ENSDARG00000056722 5036 2.455 - - - - - 0.836 0.825 - 0.794 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
17. snrnp70 ENSDARG00000077126 5921 2.447 - - - 0.997 - 0.719 - - 0.731 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
18. efnb3b ENSDARG00000042277 5823 2.438 - - 0.897 - 0.748 - 0.793 - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
19. wu:fb17g07 wu:fb17g07 10567 2.434 - - - - - - 0.753 0.820 0.861
20. SERBP1 SERBP1 9276 2.433 - - - - 0.956 0.743 0.734 - -
21. ubr5 ENSDARG00000018192 9267 2.417 - - - - 0.901 0.721 0.795 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
22. syt11a ENSDARG00000057913 1145 2.416 - - 0.848 - - 0.849 0.719 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
23. atp1b4 ENSDARG00000053262 1337 2.415 - - - - 0.788 0.835 0.792 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
24. zbtb18 ENSDARG00000028228 3653 2.408 - - 0.875 - - 0.819 - - 0.714 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
25. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.399 - - - - - 0.865 0.824 - 0.710 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
26. sf3a3 ENSDARG00000100114 4511 2.395 - 0.704 0.893 - - - 0.798 - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
27. tmpob ENSDARG00000022978 8121 2.375 - - - - - 0.863 0.738 - 0.774 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
28. srsf6b ENSDARG00000016783 9926 2.365 - - - - - 0.830 - 0.809 0.726 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
29. MAP4K4 ENSDARG00000098670 4665 2.354 - - - - 0.889 0.730 - - 0.735 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
30. mdkb ENSDARG00000020708 5393 2.354 - - - - - 0.826 0.760 - 0.768 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
31. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.347 - - - - - 0.793 0.809 - 0.745 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
32. cldn5a ENSDARG00000043716 3865 2.336 - - 0.850 - - 0.739 0.747 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
33. sumo3a ENSDARG00000028119 13447 2.332 - - - - - 0.844 0.702 - 0.786 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
34. ELOVL4 ELOVL4 3026 2.33 - - 0.862 - - - 0.753 - 0.715
35. FP016176.1 FP016176.1 7030 2.325 - - - - - - 0.751 0.772 0.802
36. dla ENSDARG00000010791 9281 2.316 - - 0.820 - - - 0.721 - 0.775 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
37. tmsb ENSDARG00000054911 6411 2.315 - - - - - 0.764 0.784 - 0.767 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
38. ADAM22 ENSDARG00000060532 2259 2.315 - - - - - 0.853 0.741 - 0.721 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
39. nxf1 ENSDARG00000055076 3251 2.3 - - 0.862 - - 0.723 0.715 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
40. lfng ENSDARG00000037879 11783 2.3 - - - - - 0.724 - 0.780 0.796 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
41. sf1 ENSDARG00000008188 5142 2.296 - 0.737 - - 0.762 0.797 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
42. lypla2 ENSDARG00000053656 8971 2.294 - - - - - 0.760 0.762 - 0.772 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
43. npas3b npas3b 1446 2.291 - - - - - 0.827 0.746 - 0.718
44. tubb5 ENSDARG00000037997 18691 2.286 0.716 - 0.798 - - - 0.772 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
45. si:ch73-21g5.7 ENSDARG00000093156 9412 2.278 - - - - - 0.840 0.725 - 0.713 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
46. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.272 - - - - - 0.788 0.719 - 0.765 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
47. plp1a ENSDARG00000103732 3544 2.261 - - - - - 0.805 0.722 - 0.734 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
48. her4.1 ENSDARG00000056732 1264 2.259 - - - - - 0.733 0.768 - 0.758 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
49. snrpd3l ENSDARG00000076283 7655 2.257 - - - - - 0.816 0.737 - 0.704 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
50. nrarpb ENSDARG00000018958 6225 2.235 - - - - - 0.771 0.732 - 0.732 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
51. LDLRAD4 LDLRAD4 1237 2.227 - - - - - 0.737 0.754 - 0.736
52. ZFHX3 ENSDARG00000103057 7759 2.217 0.730 - - - - 0.743 0.744 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
53. hn1b hn1b 7325 2.215 0.729 - - - - 0.710 0.776 - -
54. celf3a ENSDARG00000034668 2432 2.212 - - - - - 0.751 0.745 - 0.716 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
55. psmd8 ENSDARG00000020454 6645 2.209 - 0.715 - - - - 0.706 0.788 - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
56. kdm5c ENSDARG00000006124 4389 2.198 - - - - - 0.712 0.705 - 0.781 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
57. ube2a ENSDARG00000098466 12765 2.194 - - 0.703 - 0.707 - 0.784 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
58. creb1a ENSDARG00000053586 5068 2.185 - - - - - - 0.713 0.727 0.745 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
59. uhrf1 ENSDARG00000103409 3282 2.162 0.720 - - - - 0.713 - - 0.729 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
60. dennd5a ENSDARG00000017006 3426 1.85 - - 0.856 0.994 - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
61. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.77 - - - 0.995 - - - - 0.775 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
62. tagln3b ENSDARG00000058394, ENSDARG00000115045 2756 1.759 - - - 0.991 - 0.768 - - - transgelin 3b [Source:ZFIN;Acc:ZDB-GENE-030131-4199]
63. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.755 - - - 0.997 - - 0.758 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
64. alyref ENSDARG00000077732 25934 1.731 - - 0.773 0.958 - - - - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
65. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.729 - - - - - 0.845 - - 0.884 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
66. adpgk2 ENSDARG00000062785 8229 1.725 - - - 0.980 0.745 - - - - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
67. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.718 - - 0.868 - - 0.850 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
68. map2 ENSDARG00000055052 6062 1.715 - - - 0.992 - - 0.723 - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
69. actr1 ENSDARG00000011611 3879 1.71 - - - - 0.890 - 0.820 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
70. mapk12b ENSDARG00000006409 2246 1.709 - - 0.889 - - 0.820 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
71. carm1 ENSDARG00000018698 5599 1.693 - - 0.888 - - - - - 0.805 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
72. smarcd1 ENSDARG00000019004 6028 1.684 - 0.846 - - - - - - 0.838 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
73. mad2l1 ENSDARG00000004713 3398 1.673 - - - - 0.957 - 0.716 - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
74. ubtf ENSDARG00000035066 4070 1.671 - - 0.891 - - 0.780 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
75. coe2 coe2 1633 1.663 - - 0.894 - - 0.769 - - -
76. tmem198a ENSDARG00000042115 1694 1.661 - - - - 0.901 - 0.760 - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
77. nin ENSDARG00000060298 1558 1.661 - - 0.873 - - 0.788 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
78. CDCA4 ENSDARG00000042319 7918 1.66 - - - - 0.844 0.816 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
79. atoh1b ENSDARG00000099564 494 1.654 - - 0.863 - - 0.791 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
80. plxnb1b ENSDARG00000017211 4676 1.654 - - - - - 0.744 0.910 - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
81. qki2 ENSDARG00000010018 2230 1.654 - - - - - 0.869 0.785 - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
82. dpysl3 ENSDARG00000002587 4381 1.65 - - - - - - - 0.837 0.813 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
83. gfap ENSDARG00000025301 5584 1.649 - - 0.879 - - 0.770 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
84. srp9 ENSDARG00000042851 3254 1.645 - - 0.837 - - 0.808 - - - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
85. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.642 - - 0.811 - - 0.831 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
86. bri3bp ENSDARG00000010108 6295 1.638 - - 0.843 - - - - - 0.795 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
87. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.637 - - 0.856 - 0.781 - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
88. ncalda ENSDARG00000070688 5069 1.635 - - 0.922 - - 0.713 - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
89. tle2 5014 1.633 - - - - - 0.886 0.747 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
90. pbx2 ENSDARG00000019717 6892 1.631 - - - - - 0.855 - 0.776 - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
91. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.631 - - - - 0.900 - - - 0.731 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
92. tmpoa ENSDARG00000007315 3638 1.631 - - - - 0.902 - 0.729 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
93. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.631 - - 0.894 - - 0.737 - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
94. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.631 - - - - - - 0.895 0.736 - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
95. wu:fq41a10 wu:fq41a10 7009 1.63 - - 0.889 - - - 0.741 - -
96. CYTH2 ENSDARG00000028800 2349 1.63 - - - - - 0.823 0.807 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
97. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.63 - - - 0.788 - 0.842 - - - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
98. ctbp2 ctbp2 3255 1.63 - - - - - 0.835 0.795 - -
99. WDFY3 ENSDARG00000078890 2092 1.626 - - 0.838 - - 0.788 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
100. HNRNPAB HNRNPAB 22267 1.622 - - - - - - 0.757 - 0.865

There are 1814 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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