Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ssbp1

Gene Name Gene ID Reads Annotation
ssbp1 ENSDARG00000039350 809 single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]










Genes with expression patterns similar to ssbp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssbp1 ENSDARG00000039350 809 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
2. nop16 ENSDARG00000044402 3645 2.456 0.844 - - - - 0.786 - 0.826 - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
3. hsd17b10 ENSDARG00000017781 1793 2.417 0.826 0.796 - - - - 0.795 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
4. pelo ENSDARG00000055477 1927 2.371 - 0.712 - - - - 0.776 0.883 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
5. ndufa5 ENSDARG00000039346 2617 2.37 - 0.828 - - - - 0.724 0.818 - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
6. nars ENSDARG00000061100 2948 2.339 0.806 0.781 - - - - 0.752 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
7. prmt1 ENSDARG00000010246 11311 2.282 0.717 0.764 - - - - - 0.801 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
8. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 2.276 0.795 - - - - - 0.722 0.759 - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
9. MRPL52 ENSDARG00000090568 4402 2.26 - 0.725 - - - - 0.798 0.737 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
10. gstm gstm 4064 2.231 0.711 0.774 - - - - - 0.746 -
11. asap1a ENSDARG00000029463 1566 1.727 - 0.817 - - - - - 0.910 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
12. me3 ENSDARG00000002305 3305 1.701 - - - - - - 0.858 0.843 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
13. PHB2 PHB2 3755 1.679 - 0.852 - - - - 0.827 - -
14. ogfr ENSDARG00000037837 1001 1.67 0.745 - - - - - - 0.925 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
15. dnajc7_1 ENSDARG00000058148 687 1.664 - - - - - - 0.751 0.913 - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
16. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.663 0.829 0.834 - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
17. dnajc5ga ENSDARG00000041896 1478 1.657 - - - - - - 0.802 0.855 - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
18. nol7 ENSDARG00000075795 1559 1.653 - 0.798 - - - - 0.855 - - nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
19. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.65 - 0.736 - - - - - 0.914 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
20. mrpl44 ENSDARG00000094277 1778 1.634 - 0.817 - - - - 0.817 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
21. ap2m1b ENSDARG00000033899 317 1.63 - 0.729 - - - - - 0.901 - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
22. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.625 0.800 - - - - - 0.825 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
23. smurf2 ENSDARG00000038067 2057 1.623 0.776 - - - - - - 0.847 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
24. EEF1E1 ENSDARG00000071774 3806 1.62 0.789 0.831 - - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
25. si:dkey-258f14.2 ENSDARG00000094874 297 1.619 - 0.838 - - - 0.781 - - - si:dkey-258f14.2 [Source:ZFIN;Acc:ZDB-GENE-081104-395]
26. zgc:77086 ENSDARG00000014015 4908 1.592 0.785 - - - - 0.807 - - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
27. dixdc1a ENSDARG00000025302 716 1.59 0.739 - - - - - - 0.851 - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
28. alpk3a ENSDARG00000078989 1992 1.589 0.722 0.867 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
29. pik3c2b ENSDARG00000086927 864 1.588 - 0.743 - - - - - 0.845 - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
30. wdr12 ENSDARG00000003287 1026 1.586 0.767 - - - - - - 0.819 - WD repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-030131-371]
31. ntmt1 ENSDARG00000022399 5779 1.585 - 0.868 - - - - 0.717 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
32. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.584 - - - - - 0.713 - 0.871 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
33. frmd6 ENSDARG00000002332 2698 1.584 - 0.758 - - - - 0.826 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
34. zgc:162967 zgc:162967 2132 1.583 0.837 - - - - 0.746 - - -
35. klhl21 ENSDARG00000039255 2550 1.581 0.833 0.748 - - - - - - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
36. jph1a ENSDARG00000058603 2852 1.579 - 0.860 - - - 0.719 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
37. lpl ENSDARG00000087697 2578 1.577 - 0.826 - - - - 0.751 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
38. CR388231.3 ENSDARG00000105601 2404 1.577 - 0.702 - - - - - 0.875 -
39. actn3b ENSDARG00000001431 15747 1.576 0.709 0.867 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
40. rpl7l1 ENSDARG00000042864 3256 1.575 0.712 - - - - - - 0.863 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
41. rnd3a ENSDARG00000076799 4705 1.574 - 0.712 - - - - - 0.862 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
42. cacna2d1a ENSDARG00000014804 1924 1.573 0.779 0.794 - - - - - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
43. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.572 - 0.861 - - - - 0.711 - -
44. zgc:66479 ENSDARG00000008732 3347 1.571 - 0.796 - - - - 0.775 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
45. mef2aa ENSDARG00000031756 2699 1.571 - 0.845 - - - - 0.726 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
46. mybbp1a ENSDARG00000078214 2458 1.57 - 0.768 - - - - 0.802 - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
47. ctdspl2b ENSDARG00000060586 1682 1.569 0.842 - - - - - 0.727 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
48. tlk1a ENSDARG00000042467 2339 1.569 - 0.755 - - - - - 0.814 - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
49. tmsb ENSDARG00000054911 6411 1.569 0.762 0.807 - - - - - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
50. FHOD3_1 FHOD3_1 983 1.568 0.742 0.826 - - - - - - -
51. cct5 ENSDARG00000045399 11572 1.564 0.843 0.721 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
52. trim101 ENSDARG00000018264 827 1.564 - 0.844 - - - 0.720 - - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
53. fmnl3 ENSDARG00000004372 821 1.563 0.757 0.806 - - - - - - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
54. txlnbb ENSDARG00000076241 6396 1.563 0.707 0.856 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
55. slc25a39 ENSDARG00000007449 630 1.563 - 0.700 - - - - - 0.863 - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
56. prkag3b ENSDARG00000000369 1945 1.562 - 0.808 - - - 0.754 - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
57. timm8b ENSDARG00000055708 7291 1.562 - 0.821 - - - - 0.741 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
58. C1QBP ENSDARG00000039887 11186 1.56 0.738 - - - - - 0.822 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
59. polr2k ENSDARG00000075616 2047 1.56 - 0.739 - - - - - 0.821 - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
60. vwde ENSDARG00000103443 5758 1.557 0.750 0.807 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
61. Mar-06 Mar-06 953 1.556 - - - - - - 0.702 0.854 -
62. ARHGAP32 ARHGAP32 670 1.555 - 0.836 - - - - - 0.719 -
63. gypc ENSDARG00000041546 1487 1.552 0.757 0.795 - - - - - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
64. arpp21 ENSDARG00000061081 892 1.552 - 0.795 - - - 0.757 - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
65. atp5e 14858 1.549 0.741 - - - - - 0.808 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
66. cactin ENSDARG00000059866 553 1.549 - - - 0.707 - 0.842 - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
67. kmt2bb ENSDARG00000060697 5230 1.549 - 0.710 - - - - - 0.839 - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
68. timm13 ENSDARG00000058297 4447 1.548 0.735 0.813 - - - - - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
69. cilp ENSDARG00000053362 1429 1.546 - 0.799 - - - 0.747 - - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
70. uqcrc2a ENSDARG00000014794 3949 1.546 - 0.716 - - - - 0.830 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
71. mrps2 ENSDARG00000103198 2410 1.545 - 0.710 - - - - 0.835 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
72. C25H12orf73 C25H12orf73 2031 1.544 - 0.765 - - - - 0.779 - -
73. BX294434.1 ENSDARG00000061272 6493 1.542 0.733 0.809 - - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
74. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.542 - - - - - 0.709 - 0.833 - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
75. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.54 0.785 - - - - 0.755 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
76. ddx27 ENSDARG00000091831 1471 1.539 - - - - - - 0.711 0.828 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
77. acap3a ENSDARG00000075990 9652 1.537 0.719 - - - - - 0.818 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
78. TMEM102 ENSDARG00000087162 312 1.537 - 0.833 - - - - 0.704 - - transmembrane protein 102 [Source:HGNC Symbol;Acc:HGNC:26722]
79. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.537 - 0.714 - - - - 0.823 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
80. srpk3 ENSDARG00000005916 1546 1.535 0.703 0.832 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
81. setd3 ENSDARG00000016513 1507 1.535 - 0.813 - - - - 0.722 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
82. ncl ENSDARG00000002710 16951 1.53 - 0.774 - - - 0.756 - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
83. hmgcrb ENSDARG00000105206 2080 1.53 - - - - - 0.732 - 0.798 - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
84. six1a ENSDARG00000039304 1183 1.53 - 0.781 - - - 0.749 - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
85. lsm14ab ENSDARG00000100553 3837 1.53 0.765 - - - - - - 0.765 - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
86. asb5b ENSDARG00000053222 1207 1.529 - 0.769 - - - 0.760 - - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
87. ndufs1 ENSDARG00000028546 5795 1.529 0.747 - - - - - 0.782 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
88. zcchc24 ENSDARG00000078026 1619 1.528 0.751 0.777 - - - - - - - zinc finger, CCHC domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-3573]
89. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.527 0.759 - - - - - 0.768 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
90. pes ENSDARG00000018902 3286 1.526 0.727 0.799 - - - - - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
91. chrna1 ENSDARG00000009021 2931 1.523 0.721 0.802 - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
92. nudt3a ENSDARG00000016256 2713 1.522 - 0.792 - - - - - 0.730 - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
93. mrps18b ENSDARG00000007065 2121 1.521 - 0.764 - - - 0.757 - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
94. grpel2 ENSDARG00000069421 5673 1.519 0.736 0.783 - - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
95. trim35-40 ENSDARG00000042116 398 1.515 - 0.731 - - - - - 0.784 - tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]
96. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.514 0.735 0.779 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
97. cd248b ENSDARG00000077938 2561 1.512 0.731 0.781 - - - - - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
98. vbp1 ENSDARG00000030241 10619 1.512 0.723 0.789 - - - - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
99. rwdd1 ENSDARG00000015930 2380 1.511 - 0.768 - - - - 0.743 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
100. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 1.51 - - - - - 0.710 0.800 - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]

There are 1559 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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