Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srsf7a

Gene Name Gene ID Reads Annotation
srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]










Genes with expression patterns similar to srsf7a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
2. lsm7 ENSDARG00000058328 7191 3.255 - 0.821 - - 0.791 - 0.853 - 0.790 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
3. TAF15 ENSDARG00000070019 5102 3.2 - - 0.787 0.755 - - - 0.808 0.850 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
4. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 3.111 - 0.785 0.819 - - 0.783 - - 0.724 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
5. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.07 - - 0.792 - 0.771 - - 0.749 0.758 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
6. jarid2b ENSDARG00000062268 2206 2.878 0.713 0.704 0.717 - - - - - 0.744 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
7. hdac1 ENSDARG00000015427 19804 2.568 - - 0.832 - - 0.818 - - 0.918 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
8. hnrnpub ENSDARG00000004735 16496 2.498 - - - 0.800 - 0.791 - - 0.907 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
9. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.498 - - - 0.832 - 0.850 - - 0.816 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
10. CDCA4 ENSDARG00000042319 7918 2.481 - 0.765 0.802 - - 0.914 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
11. kif11 ENSDARG00000010948 4973 2.458 - - 0.806 - 0.825 - - - 0.827 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
12. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.447 - - 0.808 - - - - 0.796 0.843 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
13. smc1al ENSDARG00000058203 8838 2.445 - - 0.769 - - 0.755 - - 0.921 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
14. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 2.431 - 0.875 - - - - - 0.703 0.853 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
15. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.424 - 0.794 0.875 - - 0.755 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
16. kpnb1 ENSDARG00000104889 9282 2.406 - 0.866 0.723 - - - - - 0.817 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
17. nr2f1a ENSDARG00000052695 5037 2.402 - - - - - 0.863 - 0.758 0.781 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
18. stmn1a ENSDARG00000004169 21169 2.402 - - 0.704 - 0.891 - - - 0.807 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
19. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.402 0.773 - - - - 0.824 - - 0.805 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
20. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 2.399 - 0.872 - - - 0.786 - - 0.741 heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
21. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.392 - - 0.775 - 0.728 0.889 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
22. cdkn2aipnl ENSDARG00000053395 5107 2.387 - - 0.827 - - - 0.817 - 0.743 CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
23. arid1aa ENSDARG00000101710 3644 2.387 - - - - - 0.796 - 0.806 0.785 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
24. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.38 - 0.817 0.779 - - - - 0.784 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
25. drap1 ENSDARG00000041203 6749 2.37 - - 0.700 - - - 0.898 0.772 - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
26. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 2.366 - - - - - 0.830 - 0.779 0.757 exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
27. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.36 - - 0.718 - - 0.887 - 0.755 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
28. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.354 - 0.708 - - - 0.814 - - 0.832 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
29. MAP4K4 ENSDARG00000098670 4665 2.331 - - 0.744 - - 0.752 - - 0.835 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
30. puf60a ENSDARG00000032175 5618 2.33 - - 0.819 0.705 - - - - 0.806 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
31. ckap5 ENSDARG00000102674 5068 2.33 - - 0.794 - - - 0.822 0.714 - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
32. rhoaa ENSDARG00000026845 6900 2.328 - 0.865 - - - 0.713 - - 0.750 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
33. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 2.325 - - 0.709 - - - - 0.779 0.837 activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
34. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 2.323 - - 0.705 - - 0.806 - - 0.812 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
35. rbmx ENSDARG00000014244 3445 2.323 - - 0.731 - - 0.786 - - 0.806 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
36. ywhaqb ENSDARG00000023323 28138 2.32 - - - - 0.821 - 0.714 0.785 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
37. h3f3d ENSDARG00000045248 43757 2.319 - - - 0.733 - 0.857 - 0.729 - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
38. isoc1 ENSDARG00000060069 1621 2.31 - 0.751 - - - 0.842 - - 0.717 isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
39. snrpd1 ENSDARG00000011648 8615 2.308 - - 0.782 - - - 0.814 0.712 - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
40. camlg ENSDARG00000100409 2157 2.307 - - - - - 0.789 - 0.735 0.783 calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
41. kansl3 ENSDARG00000029556 2487 2.306 - 0.753 - - - 0.817 0.736 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
42. u2af2a ENSDARG00000012505 2920 2.302 - - 0.756 - - - - 0.746 0.800 U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
43. psma4 ENSDARG00000045928 5112 2.301 - 0.799 - - - 0.794 - - 0.708 proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
44. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 2.3 - - 0.760 - - - 0.823 - 0.717 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
45. rbpjb ENSDARG00000052091 3122 2.298 - - 0.755 - - 0.747 - - 0.796 recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
46. tgif1 ENSDARG00000059337 4020 2.297 - - 0.763 - 0.745 - - - 0.789 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
47. elavl1 11672 2.296 - - 0.773 - 0.785 0.738 - - - ELAV like RNA binding protein 1, transcript variant X3
48. arhgef2 ENSDARG00000075819 2173 2.29 - - 0.745 - - 0.804 - - 0.741 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
49. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.277 - - 0.778 - - 0.711 - - 0.788 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
50. ubap2 ubap2 4167 2.273 - - 0.706 - - 0.738 - - 0.829
51. lsm4 ENSDARG00000023852 6083 2.266 - 0.842 - - - - - 0.715 0.709 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
52. kmt2a ENSDARG00000004537 2169 2.258 - - - - - 0.706 0.744 - 0.808 lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
53. ddx19 ENSDARG00000005699 4602 2.252 - - 0.749 - - 0.720 - - 0.783 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
54. elof1 ENSDARG00000099453 6176 2.247 - - 0.748 0.707 - 0.792 - - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
55. snrnp70 ENSDARG00000077126 5921 2.241 - - 0.706 - - 0.798 0.737 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
56. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 2.222 - - 0.703 - 0.728 - - - 0.791 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
57. dnmt3b dnmt3b 2522 2.178 - - 0.727 - - - - 0.742 0.709
58. wtap ENSDARG00000042642 1779 2.168 - - - - - - 0.720 0.704 0.744 WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
59. akirin2 ENSDARG00000058729 13245 2.168 - - - - - 0.728 - 0.723 0.717 akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
60. rtkn2 rtkn2 1092 2.134 - - 0.704 - - 0.728 - - 0.702
61. puf60b ENSDARG00000001241 13827 2.116 - - - 0.701 - 0.711 - - 0.704 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
62. sumo3a ENSDARG00000028119 13447 1.779 - - - - - 0.934 - - 0.845 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
63. zgc:158409 zgc:158409 21963 1.771 - - - 0.879 - 0.892 - - -
64. rbb4 rbb4 15541 1.734 - - 0.852 - - - - - 0.882
65. ilf2 ENSDARG00000014591 14543 1.725 - - 0.882 - - - - - 0.843 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
66. ubc ENSDARG00000102632 36050 1.721 - - - 0.819 0.902 - - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
67. ptbp2b ENSDARG00000015901 2458 1.72 - - - - - 0.906 - - 0.814 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
68. npm1b ENSDARG00000037675 5448 1.716 - - - - - 0.921 - - 0.795 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
69. srsf11 ENSDARG00000098574 12801 1.716 - 0.870 - - - - - - 0.846 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
70. gnai2a ENSDARG00000018174 6549 1.707 - 0.864 - - - - 0.843 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8365]
71. Sep-02 Sep-02 10074 1.704 - 0.859 - - - 0.845 - - -
72. ppm1g ENSDARG00000075559 6516 1.702 - - - - - - 0.849 - 0.853 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
73. sf1 ENSDARG00000008188 5142 1.682 - - - - - 0.908 - - 0.774 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
74. fam60al 2846 1.677 - - - - - 0.840 - - 0.837 family with sequence similarity 60, member A, like
75. safb ENSDARG00000020467 5608 1.676 - - - - - - 0.789 - 0.887 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
76. snrpc ENSDARG00000009871 9567 1.673 - - - - - - - 0.808 0.865 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
77. blcap ENSDARG00000052073 8646 1.672 - 0.851 - - - 0.821 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
78. CYTH2 ENSDARG00000028800 2349 1.671 - - - - - 0.905 - - 0.766 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
79. srsf3b ENSDARG00000059360 14888 1.665 - - - - - - 0.918 - 0.747 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
80. rerea ENSDARG00000077353 4162 1.665 - - - - - 0.870 - 0.795 - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
81. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.662 - 0.772 - - - 0.890 - - - mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
82. parp1 ENSDARG00000019529 6787 1.658 - - 0.813 - - - - - 0.845 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
83. tuba8l3 ENSDARG00000070155 7525 1.657 - - - - - 0.839 0.818 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
84. srsf2a ENSDARG00000057484 25721 1.657 - - - 0.768 - - 0.889 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
85. hspa9 ENSDARG00000003035, ENSDARG00000114629 13898 1.652 - 0.835 - - - - 0.817 - - heat shock protein 9 [Source:ZFIN;Acc:ZDB-GENE-030828-12]
86. clic4 ENSDARG00000022995 6064 1.651 - - - - - 0.795 0.856 - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
87. SYMPK ENSDARG00000059553 1159 1.645 - - - - - 0.856 - - 0.789 symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
88. ADAM22 ENSDARG00000060532 2259 1.642 - - - - - 0.851 - 0.791 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
89. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.641 - - - - - 0.868 - - 0.773 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
90. psma3 ENSDARG00000086618 6200 1.64 - - - - - - 0.834 0.806 - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
91. snrpd3l ENSDARG00000076283 7655 1.631 - - 0.792 - - - - - 0.839 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
92. TTYH1 ENSDARG00000076804 399 1.631 - - - - - 0.864 - - 0.767 tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
93. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.63 - - - - - 0.794 - - 0.836 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
94. kif22 ENSDARG00000102624 3694 1.627 - - 0.798 - - - - - 0.829 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
95. ppp4r2a ENSDARG00000026540 1782 1.625 - - - - - 0.880 - 0.745 - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
96. hmgb3a ENSDARG00000056725 15668 1.625 - - - - - 0.788 - - 0.837 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
97. stox2a ENSDARG00000070162 1620 1.624 - - - - - 0.881 - - 0.743 storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
98. TNKS TNKS 2775 1.623 - - - - - 0.813 - - 0.810
99. bcl11ab ENSDARG00000063153 3032 1.621 - - - - - 0.831 - - 0.790 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
100. nucks1a ENSDARG00000078473 28285 1.62 - - 0.878 - - 0.742 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]

There are 2520 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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