Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srsf6a

Gene Name Gene ID Reads Annotation
srsf6a ENSDARG00000013729 8576 serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]










Genes with expression patterns similar to srsf6a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf6a ENSDARG00000013729 8576 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
2. Sep-02 Sep-02 10074 2.642 0.985 - - - 0.860 - 0.797 - -
3. supt6h ENSDARG00000006524 3221 2.498 0.971 - - - - - 0.711 - 0.816 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
4. drg1 ENSDARG00000039345 7545 2.43 - 0.999 - - - - 0.705 - 0.726 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
5. nktr ENSDARG00000059097 1998 2.419 0.977 - - - - 0.703 0.739 - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
6. hypk ENSDARG00000059725 20584 2.407 0.848 - - - 0.780 - 0.779 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
7. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 2.403 - - - - - 0.727 0.875 - 0.801 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
8. anp32b ENSDARG00000023330 25013 2.402 0.943 - - - - 0.740 0.719 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
9. sumo3a ENSDARG00000028119 13447 2.385 - - - - 0.707 - 0.806 - 0.872 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
10. denr ENSDARG00000037229 8370 2.346 - - - - 0.892 - 0.730 - 0.724 density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
11. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 2.195 - - - - - 0.725 0.760 - 0.710 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
12. dnttip2 ENSDARG00000057648 2381 1.892 0.978 - - - 0.914 - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
13. fkbp3 ENSDARG00000098059 5428 1.85 0.962 - - - 0.888 - - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
14. CR936437.1 CR936437.1 6465 1.812 - 0.996 - - - - - - 0.816
15. limk2 ENSDARG00000005104 2598 1.8 0.925 - - - 0.875 - - - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
16. st13 ENSDARG00000021973 7787 1.775 0.981 - - - - 0.794 - - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
17. lamc1 ENSDARG00000036279 11025 1.775 0.937 - - - - 0.838 - - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
18. uqcrc2a ENSDARG00000014794 3949 1.772 0.970 - - - - - 0.802 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
19. CDIP1 ENSDARG00000076118 1294 1.768 0.976 - - - - - 0.792 - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
20. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.767 0.985 - 0.782 - - - - - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
21. mmd ENSDARG00000040387 4522 1.748 0.966 - - - - 0.782 - - - monocyte to macrophage differentiation-associated [Source:ZFIN;Acc:ZDB-GENE-051120-39]
22. anxa1b ENSDARG00000100095 7763 1.745 0.928 - - - 0.817 - - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
23. nxf1 ENSDARG00000055076 3251 1.723 0.974 - - - - - 0.749 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
24. snrpc ENSDARG00000009871 9567 1.72 - - - - 0.920 - 0.800 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
25. alas1 ENSDARG00000021059 4892 1.719 0.981 - - - - - 0.738 - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
26. myef2 ENSDARG00000059398 6050 1.718 0.960 - - - - - 0.758 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
27. si:ch211-10d23.5 ENSDARG00000095510 2632 1.713 0.974 - - - - 0.739 - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
28. atp5j 4272 1.707 0.955 - - - - - 0.752 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
29. nfyba ENSDARG00000039185 1804 1.706 - 0.815 - - 0.891 - - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
30. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.704 - - - - 0.897 - 0.807 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
31. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.704 - - - - 0.882 - 0.822 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
32. sort1b ENSDARG00000056252 2652 1.704 0.966 - - - - 0.738 - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
33. cox6c ENSDARG00000038577 16845 1.695 0.911 - - - - - 0.784 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
34. h2afva ENSDARG00000068820 16427 1.691 0.932 - - - - - 0.759 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
35. arglu1a ENSDARG00000019223 8716 1.69 0.833 - - - 0.857 - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
36. pfn2l ENSDARG00000012682 21690 1.689 - - - - 0.887 - 0.802 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
37. serpinh1a ENSDARG00000075954 6488 1.689 0.974 - - - - 0.715 - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
38. srcap ENSDARG00000005236 1740 1.684 - - - - 0.892 - 0.792 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
39. plscr3b ENSDARG00000069432 8500 1.682 0.964 - - - - - 0.718 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
40. psph ENSDARG00000040314 1359 1.681 0.962 - - - - 0.719 - - - phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
41. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.68 0.977 - - 0.703 - - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
42. wdr43 ENSDARG00000077264 1992 1.679 - - - - 0.893 - 0.786 - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
43. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.677 - - - - 0.909 - 0.768 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
44. srsf3b ENSDARG00000059360 14888 1.676 0.950 - - - - - - - 0.726 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
45. ash2l ENSDARG00000060392 4916 1.674 - - - - 0.924 - 0.750 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
46. nrp1a ENSDARG00000102153 4154 1.673 0.968 - - - 0.705 - - - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
47. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.671 - - - - 0.895 - 0.776 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
48. grina grina 4656 1.67 0.968 - - - - - 0.702 - -
49. prkab1b ENSDARG00000046143 8640 1.666 0.963 - - - - - 0.703 - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
50. TNRC6A ENSDARG00000079688 14433 1.664 - - - - - 0.791 0.873 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
51. ywhaqb ENSDARG00000023323 28138 1.663 0.905 - - - - 0.758 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
52. gse1 ENSDARG00000062020 2337 1.662 0.961 - - - - - - - 0.701 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
53. IDH2 ENSDARG00000003795 18659 1.661 0.781 - - - 0.880 - - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
54. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.66 - 0.813 - - - - 0.847 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
55. cltcb ENSDARG00000090716 5544 1.659 - - - - 0.900 - 0.759 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
56. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.654 - - - - - - 0.854 - 0.800 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
57. tet3 ENSDARG00000062646 6672 1.648 - - - - 0.927 - 0.721 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
58. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.646 - - - - 0.865 0.781 - - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
59. smek1 ENSDARG00000042187 3509 1.644 - - - - 0.917 - 0.727 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
60. snrpe ENSDARG00000033175 7462 1.642 - - - - 0.922 - 0.720 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
61. eif2s2 ENSDARG00000053047 15904 1.642 0.857 - - - - - 0.785 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
62. sdha ENSDARG00000016721 8255 1.641 - - - - 0.867 - 0.774 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
63. spcs2 ENSDARG00000042823 10032 1.633 - 0.801 - - - 0.832 - - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
64. nudt3a ENSDARG00000016256 2713 1.63 - - - - 0.866 - 0.764 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
65. erc1b ENSDARG00000031930 3670 1.626 - - - - - 0.802 0.824 - - ELKS/RAB6-interacting/CAST family member 1b [Source:ZFIN;Acc:ZDB-GENE-041210-51]
66. iars2 ENSDARG00000044134 1990 1.623 - - - - 0.881 - 0.742 - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
67. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.62 - - - - 0.854 - 0.766 - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
68. lypla2 ENSDARG00000053656 8971 1.62 - - - - - - 0.821 - 0.799 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
69. sec61a1 ENSDARG00000021669 20408 1.615 - - 0.770 - 0.845 - - - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
70. dip2a ENSDARG00000078058 1625 1.615 - 0.799 - - - - 0.816 - - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]
71. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.613 0.911 - - - - - 0.702 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
72. h2afy2_1 ENSDARG00000087897 9887 1.612 - 0.805 - - - - 0.807 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
73. gabpb2a ENSDARG00000007943 1570 1.609 - - - - 0.882 - 0.727 - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
74. srsf11 ENSDARG00000098574 12801 1.609 - - 0.895 - - - - - 0.714 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
75. usp7 ENSDARG00000073710 7017 1.609 - 0.810 - - - - 0.799 - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
76. srsf6b ENSDARG00000016783 9926 1.607 - - - - - - 0.803 - 0.804 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
77. MKI67 ENSDARG00000091150 11038 1.607 - - - - - - 0.804 - 0.803 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
78. vldlr ENSDARG00000006257 772 1.607 - - - - 0.877 - 0.730 - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
79. vgll4b ENSDARG00000103730 5266 1.606 - - - - 0.894 - 0.712 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
80. snx1a ENSDARG00000071031 3975 1.601 - - - - 0.889 - 0.712 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
81. ndufa5 ENSDARG00000039346 2617 1.597 - - 0.845 - - - 0.752 - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
82. dido1 ENSDARG00000057940 3819 1.589 - - - - - - 0.801 - 0.788 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
83. CR361563.1 CR361563.1 1355 1.588 - - - - 0.882 - 0.706 - -
84. chd7 ENSDARG00000075211 12085 1.586 - 0.806 0.780 - - - - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
85. dctn2 ENSDARG00000031388 3825 1.582 - 0.813 - - - - 0.769 - - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
86. cbx5 ENSDARG00000061187 24026 1.581 - - - - - 0.850 0.731 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
87. ssbp4 ENSDARG00000056483 10196 1.579 - - - - 0.864 - 0.715 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
88. abcf1 ENSDARG00000031795 8635 1.574 - - - - - - 0.744 - 0.830 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
89. fscn1a ENSDARG00000059680 3999 1.57 - - - - - - 0.723 - 0.847 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
90. evpla ENSDARG00000019808 7565 1.568 0.788 - - - 0.780 - - - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
91. UBE2D2 ENSDARG00000043484 11723 1.566 - - - - 0.802 0.764 - - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
92. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.565 - - - - - - 0.858 - 0.707 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
93. khsrp ENSDARG00000026489 15738 1.565 - - - - - - 0.766 - 0.799 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
94. plcg1 ENSDARG00000038442 5324 1.563 - - - - - - 0.759 - 0.804 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
95. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.558 - - - - 0.706 - - - 0.852 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
96. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.556 - - - - 0.829 0.727 - - - solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
97. SNRPG ENSDARG00000099667 18697 1.556 0.845 - - - - - 0.711 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
98. abce1 ENSDARG00000007216 7502 1.555 - 0.767 - - - - 0.788 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
99. syncripl ENSDARG00000026723 3889 1.554 - - - - - - 0.788 - 0.766 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
100. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.546 - - 0.799 - - 0.747 - - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]

There are 1432 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA