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Results for srsf3b

Gene Name Gene ID Reads Annotation
srsf3b ENSDARG00000059360 14888 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]










Genes with expression patterns similar to srsf3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf3b ENSDARG00000059360 14888 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
2. rsl24d1 ENSDARG00000040439 13537 3.577 - 0.980 - 0.866 - 0.849 0.882 - - ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
3. rbb4 rbb4 15541 3.509 - 0.876 - 0.898 - 0.886 - - 0.849
4. znf865 ENSDARG00000036698 15532 3.157 - - 0.956 - 0.776 0.718 - - 0.707 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
5. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 2.7 - - 0.997 0.891 - - 0.812 - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
6. eif3s10 ENSDARG00000076815 10822 2.631 - - - 0.894 0.952 - - - 0.785 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
7. erh ENSDARG00000032866 20633 2.574 - - 0.956 - - - 0.886 0.732 - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
8. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 2.57 - - 0.972 - - - 0.836 - 0.762 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
9. dhx15 ENSDARG00000015392 7496 2.562 0.969 0.876 - - - - - - 0.717 DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
10. smo ENSDARG00000002952 6411 2.545 - - 0.992 - 0.834 0.719 - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
11. nxf1 ENSDARG00000055076 3251 2.501 0.969 - - - 0.828 - - - 0.704 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
12. srsf11 ENSDARG00000098574 12801 2.478 - - - 0.921 - - - 0.757 0.800 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
13. ube2e1 ENSDARG00000116649 10656 2.475 - - 0.993 - - 0.709 0.773 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
14. brd3b ENSDARG00000100129 6387 2.448 0.973 - - - 0.766 0.709 - - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
15. igf2bp3 ENSDARG00000010266 5789 2.422 - 0.876 - - 0.766 - 0.780 - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
16. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.42 - - - 0.843 - 0.701 - - 0.876 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
17. hdac1 ENSDARG00000015427 19804 2.409 - - - 0.865 - 0.719 - - 0.825 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
18. ppm1g ENSDARG00000075559 6516 2.376 - - - - - 0.744 0.822 - 0.810 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
19. eif3f ENSDARG00000077533 24387 2.309 0.714 - - - - - 0.779 - 0.816 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
20. wu:fc51f04 wu:fc51f04 7074 2.305 - - - - 0.795 - 0.756 - 0.754
21. snrpd3l ENSDARG00000076283 7655 2.296 - - - - - 0.721 - 0.788 0.787 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
22. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.292 - 0.701 - - - 0.857 - - 0.734 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
23. marcksa ENSDARG00000004049 2518 2.261 - - - - 0.820 0.705 - - 0.736 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
24. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 2.178 - - - - 0.725 0.704 - - 0.749 survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
25. anp32b ENSDARG00000023330 25013 1.85 0.953 - - 0.897 - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
26. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 1.845 0.968 0.877 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
27. sort1b ENSDARG00000056252 2652 1.838 0.966 0.872 - - - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
28. dnttip2 ENSDARG00000057648 2381 1.827 0.967 - - 0.860 - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
29. toporsb ENSDARG00000105028 1898 1.827 - - 0.996 - 0.831 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
30. cxcl12a ENSDARG00000037116 5433 1.81 0.942 - - 0.868 - - - - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
31. naa15a ENSDARG00000003213 5889 1.788 0.968 - - - 0.820 - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
32. supt6h ENSDARG00000006524 3221 1.784 0.966 - - - 0.818 - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
33. ddi2 ENSDARG00000006477 4190 1.782 0.972 - - - 0.810 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
34. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.776 - - 0.996 - - - 0.780 - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
35. arpc4 ENSDARG00000054063 6150 1.774 0.939 - - 0.835 - - - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
36. cldnc ENSDARG00000015955 3196 1.767 0.895 0.872 - - - - - - - claudin c [Source:ZFIN;Acc:ZDB-GENE-010328-3]
37. psma3 ENSDARG00000086618 6200 1.757 - - - 0.911 - - 0.846 - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
38. sf3a1 ENSDARG00000041887 6702 1.743 - - 0.967 - - - - - 0.776 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
39. pno1 ENSDARG00000008502 4547 1.731 0.969 - - - 0.762 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
40. atp6ap2 ENSDARG00000008735 5096 1.726 0.944 - - - - - 0.782 - - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
41. psmb3 ENSDARG00000013938 10744 1.725 - - - 0.930 - - - - 0.795 proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
42. SNRPG ENSDARG00000099667 18697 1.72 0.887 - - - - - - - 0.833 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
43. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.72 0.964 - - - - - 0.756 - - ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
44. pdlim5b ENSDARG00000027600 4252 1.718 0.966 - - - 0.752 - - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
45. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.71 0.877 0.833 - - - - - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
46. srsf5b ENSDARG00000027734 6996 1.706 - 0.880 - - - - 0.826 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
47. mrpl12 ENSDARG00000038768 5539 1.703 - - 0.996 - - - 0.707 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
48. hadh ENSDARG00000030765 3406 1.702 0.945 - - - - - 0.757 - - hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
49. sf3b4 ENSDARG00000018574 7470 1.699 0.967 - - - - - 0.732 - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
50. txnipa ENSDARG00000036107 8863 1.696 0.968 - - - - - 0.728 - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
51. aplp2 ENSDARG00000054864 7958 1.691 - 0.986 - - - - 0.705 - - amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
52. ubc ENSDARG00000102632 36050 1.688 0.958 - - - - 0.730 - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
53. zgc:123194 zgc:123194 69174 1.688 - - 0.819 0.869 - - - - -
54. srp72 ENSDARG00000014139 5221 1.683 0.916 - - - - - 0.767 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
55. lmnb2 ENSDARG00000101624 11304 1.678 - - - - - - 0.878 - 0.800 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
56. srsf6a ENSDARG00000013729 8576 1.676 0.950 - - - - - - - 0.726 serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
57. hmgb3a ENSDARG00000056725 15668 1.675 - - - 0.870 - - - - 0.805 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
58. eif2a ENSDARG00000101061 3800 1.671 0.951 - - - - - 0.720 - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
59. hspe1 ENSDARG00000056167 21636 1.67 0.949 - - 0.721 - - - - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
60. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.665 - - - - - - 0.918 - 0.747 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
61. nmt1a ENSDARG00000052966 5918 1.662 - - - 0.874 - - 0.788 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
62. CABZ01081490.1 ENSDARG00000111653 11892 1.66 - - - - 0.783 - 0.877 - -
63. atp5g3a 9539 1.66 - 0.876 - - 0.784 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
64. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 1.658 0.916 - - - - - 0.742 - - succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
65. lum ENSDARG00000045580 5395 1.658 - 0.874 - - 0.784 - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
66. suclg1 ENSDARG00000052712 17570 1.653 0.809 0.844 - - - - - - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
67. rab5c ENSDARG00000026712 4733 1.652 - - - 0.860 0.792 - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
68. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.644 - - - 0.886 - - 0.758 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
69. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.64 - 0.865 - - - - - - 0.775 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
70. drap1 ENSDARG00000041203 6749 1.638 - - - - - 0.748 0.890 - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
71. lypla2 ENSDARG00000053656 8971 1.634 - - - - - 0.787 - - 0.847 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
72. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.632 - - - 0.832 - - - 0.800 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
73. cux1a ENSDARG00000078459 3914 1.627 - 0.876 - - - - - - 0.751 cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
74. tuba1c ENSDARG00000055216 8384 1.624 - 0.878 - - - - - - 0.746 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
75. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.623 - - - - - - 0.860 - 0.763 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
76. socs6b ENSDARG00000015863 1799 1.62 - 0.878 - - - - - 0.742 - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
77. marcksb ENSDARG00000008803 42949 1.619 0.915 - - - - 0.704 - - - myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
78. SSBP4 ENSDARG00000056483 5156 1.618 - - - 0.876 - - - 0.742 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
79. dap3 ENSDARG00000078500 2724 1.615 - 0.776 - 0.839 - - - - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
80. nusap1 ENSDARG00000002403 6953 1.613 - - - 0.912 - 0.701 - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
81. ANKRD11 ENSDARG00000051886 10024 1.608 - - - 0.844 - 0.764 - - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
82. celf3a ENSDARG00000034668 2432 1.608 - - - 0.887 - - - - 0.721 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
83. ppp3r1a ENSDARG00000092659 9729 1.607 - - - - - 0.717 0.890 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
84. sf3b2 ENSDARG00000018049 4675 1.602 0.815 - - - 0.787 - - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
85. rbbp6 ENSDARG00000037919 4813 1.602 - - - 0.878 - - - - 0.724 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
86. C20H12orf57 C20H12orf57 3325 1.598 - 0.880 - - - - - - 0.718
87. ppp1cb ENSDARG00000044153 4748 1.596 - - - - - 0.716 0.880 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
88. arpc4l ENSDARG00000058225 10107 1.591 - - - 0.822 - - 0.769 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
89. abl1 ENSDARG00000035187 3553 1.591 - 0.878 - - - - - 0.713 - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
90. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.59 - - - 0.877 - 0.713 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
91. lsm7 ENSDARG00000058328 7191 1.588 - - - - - - 0.823 - 0.765 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
92. arpp19b ENSDARG00000039880 4823 1.587 - - - 0.866 - - - - 0.721 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
93. mxd3 ENSDARG00000098350 3040 1.585 - - - 0.880 - - - - 0.705 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
94. zgc:110339 ENSDARG00000046030 8180 1.583 0.807 0.776 - - - - - - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
95. eftud2 ENSDARG00000012261 3081 1.583 - - - 0.874 - - 0.709 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
96. myh10 ENSDARG00000000103 7522 1.582 - 0.876 - - - 0.706 - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
97. fzr1 fzr1 2984 1.576 - - - 0.872 - - 0.704 - -
98. PPP1R8 PPP1R8 1897 1.575 - - - 0.867 - - - - 0.708
99. IDH2 ENSDARG00000003795 18659 1.569 0.772 - - 0.797 - - - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
100. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.568 - - - - 0.772 - - - 0.796 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]

There are 1131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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