Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srsf3a

Gene Name Gene ID Reads Annotation
srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]










Genes with expression patterns similar to srsf3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
2. caprin1b ENSDARG00000054272 7033 3.281 - 0.887 - - - 0.796 0.845 0.753 - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
3. lmnb1 ENSDARG00000044299 9817 3.251 - 0.869 - - 0.762 0.749 0.871 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
4. hmgb1b ENSDARG00000030479 10398 3.066 - - 0.775 - 0.859 0.717 0.715 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
5. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.03 - - 0.702 - - 0.714 0.841 0.773 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
6. arnt2 ENSDARG00000103697 5731 2.927 - - 0.701 - - 0.713 0.755 0.758 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
7. ranbp1 ENSDARG00000014817 3371 2.832 - 0.898 - 0.995 0.939 - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
8. mapk6 ENSDARG00000032103 6422 2.683 - - - - 0.921 0.763 - - 0.999 mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
9. ep300b ENSDARG00000061108 5173 2.553 - - - - 0.840 - 0.747 - 0.966 E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
10. ctnnb1 ENSDARG00000014571 12004 2.525 - - 0.717 - - - - 0.811 0.997 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
11. arpp19b ENSDARG00000039880 4823 2.504 - 0.828 - - 0.865 - 0.811 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
12. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 2.46 - - - - - - 0.783 0.754 0.923 TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
13. CABZ01111990.1 CABZ01111990.1 4374 2.455 - - 0.710 0.994 - - - 0.751 -
14. cnn3b ENSDARG00000029856 4807 2.452 - - - - 0.955 0.792 0.705 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
15. tcea1 ENSDARG00000003531 2912 2.451 - - - - 0.942 0.728 - 0.781 - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
16. FP016176.1 FP016176.1 7030 2.435 - - - 0.994 - 0.715 0.726 - -
17. nhp2 ENSDARG00000069422 9925 2.433 - 0.922 - - - - 0.808 0.703 - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
18. TNRC6A ENSDARG00000079688 14433 2.423 - 0.851 0.704 - - - 0.868 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
19. ssbp4 ENSDARG00000056483 10196 2.416 - - - - - 0.705 0.906 0.805 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
20. mapre1b ENSDARG00000002659 9119 2.396 - - - - 0.901 0.777 - 0.718 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
21. smc1al ENSDARG00000058203 8838 2.394 - - 0.756 - - 0.823 0.815 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
22. tdg tdg 3269 2.389 - - - - 0.943 0.734 0.712 - -
23. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.38 - 0.817 0.779 - - - - 0.784 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
24. blcap ENSDARG00000052073 8646 2.377 - 0.925 - - - 0.724 0.728 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
25. smarce1 ENSDARG00000016871 9628 2.369 - - - - 0.783 0.818 0.768 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
26. nucks1a ENSDARG00000078473 28285 2.358 - - 0.785 - - 0.809 - 0.764 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
27. khsrp ENSDARG00000026489 15738 2.356 0.746 - - - - 0.778 0.832 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
28. MKI67 ENSDARG00000091150 11038 2.355 0.727 - - - 0.831 - 0.797 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
29. otub1b ENSDARG00000011462 4329 2.352 - 0.843 - - - - 0.756 0.753 - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
30. sumo3a ENSDARG00000028119 13447 2.345 0.761 - - - - 0.770 0.814 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
31. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 2.345 - 0.891 0.708 - - - 0.746 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
32. h2afva ENSDARG00000068820 16427 2.332 - - - - - 0.727 0.869 0.736 - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
33. prmt1 ENSDARG00000010246 11311 2.329 - - 0.724 - - 0.770 0.835 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
34. snrpf ENSDARG00000105037 10241 2.305 - - - - 0.821 0.706 0.778 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
35. rbb4 rbb4 15541 2.303 - - 0.778 - - 0.702 0.823 - -
36. smarca5 ENSDARG00000052348 15433 2.287 - - - 0.743 - 0.712 0.832 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
37. npm1b ENSDARG00000037675 5448 2.271 - - - - 0.818 0.727 0.726 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
38. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.271 - - 0.745 - - 0.725 0.801 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
39. thoc7 ENSDARG00000015394 3824 2.24 - - 0.788 - - 0.724 0.728 - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
40. aspm ENSDARG00000103754 5708 2.237 - - 0.769 - - 0.753 0.715 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
41. srgap1 srgap1 2320 2.214 0.719 - - - - 0.715 0.780 - -
42. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 2.208 - - 0.704 - - 0.753 0.751 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
43. zgc:174906 ENSDARG00000075314 2187 2.173 - - 0.716 - - 0.750 0.707 - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
44. sirt2 ENSDARG00000011488 5389 1.908 - - - 0.993 0.915 - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
45. NDUFB2 ENSDARG00000045490 9141 1.901 - 0.903 - - - - - - 0.998 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
46. ncoa5 ENSDARG00000016345 5765 1.868 - 0.872 - 0.996 - - - - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
47. luc7l3 ENSDARG00000014366 4416 1.823 - - - 0.996 - - 0.827 - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
48. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.808 - - - 0.994 - - 0.814 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
49. ppp1cc 2361 1.805 - 0.879 - - 0.926 - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
50. btbd10b ENSDARG00000020252 7251 1.798 - 0.872 - - 0.926 - - - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
51. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.795 - 0.857 - - 0.938 - - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
52. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 1.764 - 0.848 - - 0.916 - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
53. pbx2 ENSDARG00000019717 6892 1.757 - - - - 0.920 - 0.837 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
54. fzd1 ENSDARG00000106062 1581 1.752 - 0.828 - - 0.924 - - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
55. chst11 ENSDARG00000034375 2701 1.751 - 0.917 - - 0.834 - - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
56. smg7 ENSDARG00000060767 2759 1.751 - - - - 0.936 - 0.815 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
57. dkc1 ENSDARG00000016484 7088 1.748 - 0.938 - - 0.810 - - - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
58. fbxl5 ENSDARG00000043046 1403 1.743 - 0.851 - - 0.892 - - - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
59. si:dkey-19e4.5 ENSDARG00000089886 2562 1.743 - - - - 0.940 - 0.803 - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
60. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.742 - - - - 0.920 - 0.822 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
61. h3f3a 66671 1.74 - - - - - - 0.907 0.833 - H3 histone, family 3A, transcript variant X1
62. huwe1 ENSDARG00000016782 6493 1.738 - - - - - - 0.771 - 0.967 HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
63. snrpb ENSDARG00000011125 11729 1.728 - - - - 0.924 - 0.804 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
64. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.726 - - - 0.996 - - 0.730 - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
65. psma4 ENSDARG00000045928 5112 1.721 - 0.939 - - - - 0.782 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
66. znf346 ENSDARG00000060695 3942 1.719 - 0.933 - - - - 0.786 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
67. stip1 ENSDARG00000004906 7742 1.718 - 0.870 - - - - 0.848 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
68. btr12 ENSDARG00000051809 1804 1.718 - 0.825 - - 0.893 - - - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
69. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.716 - 0.912 0.804 - - - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
70. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.713 - 0.922 - - - - - 0.791 - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
71. mcrs1 ENSDARG00000020840 3232 1.711 - - - - 0.914 - 0.797 - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
72. vgll4b ENSDARG00000103730 5266 1.706 - 0.873 - - - - 0.833 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
73. tox3 ENSDARG00000073957 3075 1.705 - - - 0.994 - - - 0.711 - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
74. derl1 ENSDARG00000021905 4698 1.703 - 0.883 - - - - 0.820 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
75. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.7 - 0.834 - - - - 0.866 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
76. GABARAP GABARAP 8341 1.699 - - - - 0.838 - 0.861 - -
77. gng5 ENSDARG00000039830 12102 1.698 - - - 0.942 - - 0.756 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
78. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.695 - - - 0.994 - - - 0.701 - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
79. rhoaa ENSDARG00000026845 6900 1.694 - 0.896 - - - 0.798 - - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
80. Sep-02 Sep-02 10074 1.69 - 0.864 - - - - 0.826 - -
81. usf2 ENSDARG00000020228 2667 1.688 - - - - 0.929 - 0.759 - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
82. znf143a ENSDARG00000012887 1393 1.687 - - - - 0.929 0.758 - - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
83. sdc4 ENSDARG00000059906 10105 1.687 - - - - 0.920 - 0.767 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
84. golga7 ENSDARG00000057676 4691 1.686 - - - - 0.926 - 0.760 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
85. arid4a ENSDARG00000043873 4176 1.686 - 0.885 - - - - 0.801 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
86. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.683 - - - - 0.892 - 0.791 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
87. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.681 - 0.806 - - - - 0.875 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
88. uba1 ENSDARG00000037559 11579 1.676 - - - - - 0.785 0.891 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
89. patl1 ENSDARG00000017423 2744 1.668 - 0.875 - - - - 0.793 - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
90. pcdh18a ENSDARG00000089805 1096 1.668 - - - - 0.923 0.745 - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
91. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.664 - - - - - - 0.714 - 0.950 F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
92. znf503 ENSDARG00000018492 5974 1.663 - 0.914 - - - - 0.749 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
93. rrm1 ENSDARG00000014017 7296 1.661 - - - - 0.792 - 0.869 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
94. cdkn2aipnl ENSDARG00000053395 5107 1.659 - - 0.714 - 0.945 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
95. gpx4b ENSDARG00000076836 8085 1.656 - 0.873 - - - - 0.783 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
96. ilf3b ENSDARG00000105177 9473 1.655 - - - - - - 0.793 0.862 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
97. samm50l ENSDARG00000039681 2465 1.655 - - - - 0.900 - 0.755 - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
98. setd8a 2549 1.654 - - - - 0.927 - 0.727 - - SET domain containing (lysine methyltransferase) 8a
99. tcf7l1a ENSDARG00000038159 2288 1.654 - 0.864 - - - - 0.790 - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
100. mxd3 ENSDARG00000098350 3040 1.653 - 0.885 - - - - 0.768 - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]

There are 1471 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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