Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srsf2b

Gene Name Gene ID Reads Annotation
srsf2b ENSDARG00000103893 1437 serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]










Genes with expression patterns similar to srsf2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf2b ENSDARG00000103893 1437 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
2. kif22 ENSDARG00000102624 3694 2.96 0.758 0.719 - - - - 0.756 - 0.727 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
3. fscn1a ENSDARG00000059680 3999 2.358 - 0.835 - - - - 0.755 0.768 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
4. adssl ENSDARG00000012399 2271 2.197 - 0.745 0.743 - - 0.709 - - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
5. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 2.195 - - - - - 0.733 0.756 0.706 - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
6. rangap1a ENSDARG00000041317 1456 1.652 - 0.872 - - - - 0.780 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
7. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.597 - 0.856 - - - - - 0.741 - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
8. si:dkey-67c22.2 ENSDARG00000055389 6410 1.591 - 0.800 - - - 0.791 - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
9. uhrf1 ENSDARG00000103409 3282 1.569 - 0.824 - - - 0.745 - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
10. foxk2 ENSDARG00000030583 2982 1.56 - 0.832 - - - - - 0.728 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
11. rap1a rap1a 5654 1.551 - 0.713 - - - - 0.838 - -
12. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.549 - - 0.828 - - - 0.721 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
13. wtap ENSDARG00000042642 1779 1.547 - 0.834 - - - - - 0.713 - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
14. yaf2 ENSDARG00000015966 1905 1.546 - 0.821 - - - 0.725 - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
15. stx5a ENSDARG00000025033, ENSDARG00000112598 380 1.542 0.777 0.765 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
16. csgalnact2 ENSDARG00000061400 741 1.524 - 0.824 - - - - 0.700 - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5186]
17. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.517 - - - - - - - 0.785 0.732 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
18. cdk6 ENSDARG00000070228 1778 1.515 - - - - - 0.763 - 0.752 - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
19. tspan2 tspan2 948 1.514 - 0.770 - - - - - 0.744 -
20. uba2 ENSDARG00000101332, ENSDARG00000115924 1066 1.506 - - 0.716 - - - - 0.790 - ubiquitin-like modifier activating enzyme 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2681]
21. gpam ENSDARG00000074169 488 1.487 - 0.780 - - - - 0.707 - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
22. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 1.487 - - - - - 0.749 0.738 - - SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
23. snrpa ENSDARG00000018890 4593 1.471 - - 0.730 - - - 0.741 - - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
24. si:ch211-71n6.4 ENSDARG00000102234 2499 1.469 - 0.759 - - - 0.710 - - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
25. hspa12a ENSDARG00000070603 1474 1.467 - 0.723 - - - - 0.744 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
26. MATR3 MATR3 3962 1.462 - 0.757 0.705 - - - - - -
27. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.462 - - 0.702 - - - - 0.760 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
28. acbd3 ENSDARG00000042623 2643 1.46 - 0.747 - - - 0.713 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
29. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.458 - - 0.724 - - - 0.734 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
30. usp12a ENSDARG00000078109 490 1.458 - 0.710 - - - 0.748 - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
31. otx2 766 1.457 - - - - - 0.721 - 0.736 - orthodenticle homeobox 2, transcript variant X2
32. TEAD1 TEAD1 43 1.455 - 0.735 - - - 0.720 - - -
33. man1b1 man1b1 3294 1.455 - 0.734 - - - 0.721 - - -
34. mtmr9 ENSDARG00000015860 1339 1.452 - - - - - 0.749 - 0.703 - myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
35. msl2a ENSDARG00000038909 1357 1.451 - - - - - 0.729 - 0.722 - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
36. dnmt3b dnmt3b 2522 1.449 - - 0.704 - - 0.745 - - -
37. wdr13 ENSDARG00000022974 1283 1.448 - 0.743 - - - - 0.705 - - WD repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-050522-274]
38. slbp ENSDARG00000100558 3405 1.446 - - 0.706 - - - - 0.740 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
39. elavl3 ENSDARG00000014420 8644 1.443 - 0.730 - - - - - 0.713 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
40. tbl1xr1b ENSDARG00000008966 2203 1.439 - 0.728 - - - - 0.711 - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
41. nxf1 ENSDARG00000055076 3251 1.432 - - - - - - 0.723 - 0.709 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
42. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 1.432 - 0.720 - - - 0.712 - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
43. rbb4 rbb4 15541 1.431 - - 0.726 - - - 0.705 - -
44. cpeb3 ENSDARG00000060103 2367 1.43 - - - - - 0.701 0.729 - - cytoplasmic polyadenylation element binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-090312-68]
45. hmgb1b ENSDARG00000030479 10398 1.421 - 0.718 0.703 - - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
46. armc1 ENSDARG00000013861 175 1.418 - 0.711 - - - 0.707 - - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
47. ptbp2b ENSDARG00000015901 2458 0.91 - 0.910 - - - - - - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
48. dnajc1 ENSDARG00000001940 2848 0.896 - 0.896 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
49. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.894 - 0.894 - - - - - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
50. smfn ENSDARG00000009806 1280 0.893 - 0.893 - - - - - - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
51. ck2a2a ck2a2a 1695 0.888 - 0.888 - - - - - - -
52. DUSP23_1 DUSP23_1 1085 0.88 - 0.880 - - - - - - -
53. sgk2b ENSDARG00000006598 1039 0.879 - 0.879 - - - - - - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
54. syncripl ENSDARG00000026723 3889 0.878 - 0.878 - - - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
55. hoxc6a ENSDARG00000070343 2839 0.876 - 0.876 - - - - - - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
56. nrp2b ENSDARG00000038446 783 0.875 - 0.875 - - - - - - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
57. ptges3b_1 ENSDARG00000089626 1670 0.87 - 0.870 - - - - - - - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
58. C5HXorf56 C5HXorf56 880 0.868 - 0.868 - - - - - - -
59. ZC3H4 ENSDARG00000078355 1888 0.867 - - - - - 0.867 - - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
60. prpf4ba ENSDARG00000008784 936 0.864 - - - - - - - 0.864 - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
61. mrps11 ENSDARG00000075129 1360 0.863 - 0.863 - - - - - - - mitochondrial ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040724-84]
62. polr2f ENSDARG00000036625, ENSDARG00000110198 1330 0.862 - 0.862 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]
63. stk17a ENSDARG00000074715 528 0.862 0.862 - - - - - - - - serine/threonine kinase 17a [Source:ZFIN;Acc:ZDB-GENE-030131-5556]
64. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 0.862 - - - - - - - 0.862 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
65. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 0.862 - 0.862 - - - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
66. prpf4bb ENSDARG00000040310 2260 0.862 - 0.862 - - - - - - - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
67. ubald1b ENSDARG00000020976 1162 0.861 - 0.861 - - - - - - - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
68. RELL1 ENSDARG00000018312 579 0.861 - 0.861 - - - - - - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
69. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 0.858 - - - - - - - 0.858 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
70. phactr3b ENSDARG00000019304 447 0.856 - 0.856 - - - - - - - phosphatase and actin regulator 3b [Source:ZFIN;Acc:ZDB-GENE-050522-156]
71. clasp2 ENSDARG00000020345 3382 0.856 - 0.856 - - - - - - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
72. prelid1a ENSDARG00000098671 4745 0.856 - 0.856 - - - - - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
73. IGSF8 ENSDARG00000038467 2102 0.855 - - - - - - - 0.855 - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
74. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 0.853 - - - - - - - 0.853 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
75. gcdh gcdh 1390 0.852 - 0.852 - - - - - - -
76. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.852 - - - - - - - 0.852 - PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
77. eva1ba ENSDARG00000102701 1480 0.852 - 0.852 - - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
78. fez1 ENSDARG00000023174 701 0.851 - - - - - - - 0.851 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
79. atf7ip ENSDARG00000069619 5495 0.851 - - - - - 0.851 - - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
80. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 0.851 - - - - - 0.851 - - - transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
81. inip ENSDARG00000028523 1925 0.85 - - - - - 0.850 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
82. coa3 coa3 1423 0.85 - 0.850 - - - - - - -
83. gpsm1a ENSDARG00000092517 784 0.849 - - - - - - - 0.849 - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
84. srrm2 ENSDARG00000037965 1967 0.847 - - - - - 0.847 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
85. ddx51 ENSDARG00000025854 691 0.847 - 0.847 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Source:ZFIN;Acc:ZDB-GENE-040927-28]
86. ttc9b ENSDARG00000068421 251 0.845 - - - - - - - 0.845 - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
87. stxbp3 ENSDARG00000008142 2604 0.845 - 0.845 - - - - - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
88. TNPO2 ENSDARG00000042887 2290 0.845 - - - - - - 0.845 - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
89. sirt2 ENSDARG00000011488 5389 0.844 - 0.844 - - - - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
90. dpysl4 ENSDARG00000103490 534 0.843 - - - - - - - 0.843 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
91. pcnx 689 0.842 - 0.842 - - - - - - - pecanex homolog (Drosophila), transcript variant X5
92. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.841 - - - - - - - 0.841 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
93. ankrd28b ENSDARG00000009023 960 0.839 - 0.839 - - - - - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
94. gins4 ENSDARG00000016044 671 0.839 0.839 - - - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
95. ppp2r2a ppp2r2a 5785 0.838 - - - - - - 0.838 - -
96. papss1 ENSDARG00000057099 809 0.838 - - - - - - - 0.838 - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
97. vdac1 ENSDARG00000045132 8051 0.838 - - - - - - 0.838 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
98. sprn ENSDARG00000056004 128 0.837 - - - - - - - 0.837 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
99. commd3 ENSDARG00000045402 1601 0.837 - 0.837 - - - - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
100. TOM1L2 ENSDARG00000056394 793 0.836 - - - - - 0.836 - - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]

There are 1178 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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