Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srsf1b

Gene Name Gene ID Reads Annotation
srsf1b ENSDARG00000017843 2760 serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]










Genes with expression patterns similar to srsf1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf1b ENSDARG00000017843 2760 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
2. lrrc59 ENSDARG00000071426, ENSDARG00000109955 1998 2.68 - - 0.960 - - - 0.729 - 0.991 leucine rich repeat containing 59 [Source:ZFIN;Acc:ZDB-GENE-040426-2547]
3. ubtf ENSDARG00000035066 4070 2.491 - - 0.951 - - 0.837 0.703 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
4. ncoa2 ENSDARG00000017929 2520 2.441 - - 0.954 - - 0.709 0.778 - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
5. ube2nb ENSDARG00000045877 4583 2.326 - - 0.877 - - 0.725 0.724 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
6. COLGALT1 ENSDARG00000073974 5069 1.892 - - 0.897 - - - - - 0.995 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
7. atp1a3a ENSDARG00000018259 5393 1.868 - - 0.901 - - - - - 0.967 ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
8. coro7 ENSDARG00000089616 2141 1.844 - - 0.965 - - - 0.879 - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
9. C19H6orf62 C19H6orf62 2859 1.784 - - - - - - 0.801 - 0.983
10. fam21c 1768 1.778 - - - - - - 0.787 - 0.991 family with sequence similarity 21, member C, transcript variant X6
11. CKAP2L ENSDARG00000100573 1136 1.776 - 0.803 0.973 - - - - - - cytoskeleton associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-6690]
12. polr2j ENSDARG00000035146 1493 1.776 - - 0.957 - - 0.819 - - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
13. vangl2 ENSDARG00000027397 2418 1.774 - - 0.971 - - 0.803 - - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
14. hcfc1b ENSDARG00000012519 3633 1.769 - - - - - 0.787 - - 0.982 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
15. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.764 - - 0.966 - - - 0.798 - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
16. tubgcp2 ENSDARG00000013079 1520 1.761 - - 0.957 - - 0.804 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
17. nusap1 ENSDARG00000002403 6953 1.76 - - - - - 0.840 - - 0.920 nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
18. myo1b ENSDARG00000024694 1761 1.749 - - 0.966 - - 0.783 - - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
19. syt11a ENSDARG00000057913 1145 1.742 - - 0.971 - - 0.771 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
20. znf598 ENSDARG00000014945 1838 1.738 - - 0.964 - - - 0.774 - - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
21. cand1 ENSDARG00000017841 8164 1.736 - - - - - 0.810 - - 0.926 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
22. tshz3a ENSDARG00000087394 2455 1.724 - - - - - - 0.736 - 0.988 teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
23. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.723 - - - - - 0.733 - - 0.990 CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
24. atxn7l3 ENSDARG00000029331 531 1.723 - 0.756 0.967 - - - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
25. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.72 - - 0.937 - - - 0.783 - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
26. zgc:158409 zgc:158409 21963 1.718 - - - - - 0.756 - - 0.962
27. prr12a ENSDARG00000074229 1668 1.717 - - 0.958 - - - 0.759 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
28. CYHR1 ENSDARG00000061057 2625 1.714 - - - - - 0.726 - - 0.988 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
29. rab5c ENSDARG00000026712 4733 1.71 - - 0.954 - - - 0.756 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
30. psen2 ENSDARG00000015540 832 1.709 - - 0.968 - - - 0.741 - - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
31. meis2b ENSDARG00000077840 5166 1.708 - - 0.819 - - - - - 0.889 Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
32. pip5k1ab ENSDARG00000024642 1988 1.708 - - 0.971 - - - 0.737 - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
33. pafah1b1a ENSDARG00000032013 3183 1.707 - - - - - - 0.717 - 0.990 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
34. TNRC6C_2 TNRC6C_2 2444 1.7 - - - - - 0.712 - - 0.988
35. rfx5 ENSDARG00000063258 806 1.697 - 0.706 - - - - - - 0.991 regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]
36. cnn3b ENSDARG00000029856 4807 1.697 - - - - - 0.730 - - 0.967 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
37. plscr3b ENSDARG00000069432 8500 1.694 - - - - - - 0.737 - 0.957 phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
38. cops4 ENSDARG00000043732 1508 1.694 - - 0.954 - 0.740 - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
39. zbtb18 ENSDARG00000028228 3653 1.693 - - 0.967 - - 0.726 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
40. mllt10 ENSDARG00000045401 7557 1.693 - - - - - 0.768 - - 0.925 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
41. srsf5b ENSDARG00000027734 6996 1.691 - - 0.956 - - 0.735 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
42. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.69 - - 0.967 - - 0.723 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
43. dbn1 ENSDARG00000069113 4527 1.69 - - - - - 0.718 - - 0.972 drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
44. arglu1b ENSDARG00000018319 1110 1.689 - - 0.957 - - 0.732 - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
45. efnb3b ENSDARG00000042277 5823 1.684 - - 0.923 - - 0.761 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
46. nxf1 ENSDARG00000055076 3251 1.68 - - 0.945 - - 0.735 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
47. elmod2 ENSDARG00000101669 3101 1.675 - - 0.947 - - 0.728 - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
48. sec61a1 ENSDARG00000021669 20408 1.674 - - 0.787 - - - - - 0.887 Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
49. gpatch2 1221 1.672 - - 0.967 - - 0.705 - - - G patch domain containing 2, transcript variant X1
50. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.671 - - 0.921 - - 0.750 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
51. mapk12b ENSDARG00000006409 2246 1.671 - - 0.937 - - 0.734 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
52. gfap ENSDARG00000025301 5584 1.671 - - 0.967 - - 0.704 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
53. atoh1b ENSDARG00000099564 494 1.67 - - 0.964 - - 0.706 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
54. bri3bp ENSDARG00000010108 6295 1.67 - - 0.897 - - 0.773 - - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
55. smad7 ENSDARG00000016858 1660 1.668 - - - - - 0.722 - - 0.946 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
56. coe2 coe2 1633 1.665 - - 0.960 - - 0.705 - - -
57. dsc2l ENSDARG00000039677 2747 1.654 - - 0.941 - - - 0.713 - - desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
58. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.653 - - - - - - 0.740 - 0.913 ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
59. WDFY3 ENSDARG00000078890 2092 1.647 - - 0.946 0.701 - - - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
60. mzt2b ENSDARG00000057928 629 1.645 - 0.780 - - - 0.865 - - - mitotic spindle organizing protein 2B [Source:ZFIN;Acc:ZDB-GENE-040801-87]
61. efnb2a ENSDARG00000020164 5262 1.621 - - 0.810 - - - 0.811 - - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
62. erlin1 ENSDARG00000021991 5664 1.621 - - 0.879 - - - 0.742 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
63. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.619 - - 0.854 - - 0.765 - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
64. anp32b ENSDARG00000023330 25013 1.607 - - - - - - 0.732 - 0.875 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
65. GATAD2B ENSDARG00000005834 3855 1.602 - - 0.878 - - 0.724 - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
66. nup153 ENSDARG00000099972 1462 1.595 - - - - - 0.802 0.793 - - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
67. si:dkey-226l10.6 ENSDARG00000087483 1651 1.588 - - - - - 0.753 0.835 - - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
68. KIF26A KIF26A 1077 1.586 - 0.759 - - - 0.827 - - -
69. glceb ENSDARG00000068981 2100 1.584 - 0.834 - - - - 0.750 - - glucuronic acid epimerase b [Source:ZFIN;Acc:ZDB-GENE-040630-8]
70. hp1bp3 ENSDARG00000044669 23708 1.568 - - - - - 0.740 - - 0.828 heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
71. ssbp3b ENSDARG00000030155 7163 1.566 - - 0.839 - - 0.727 - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
72. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.564 - 0.802 - - - 0.762 - - - chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
73. emc7 ENSDARG00000012144 1608 1.563 - - - - - 0.741 0.822 - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
74. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.557 - 0.775 - - - 0.782 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
75. UNKL ENSDARG00000037838 1086 1.553 - 0.788 - - - 0.765 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
76. tbp ENSDARG00000014994 1591 1.546 - 0.797 - - - - 0.749 - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
77. CABZ01005649.2 CABZ01005649.2 715 1.544 - 0.776 - - - - 0.768 - -
78. TRAPPC8 ENSDARG00000038866 1343 1.542 0.756 0.786 - - - - - - - trafficking protein particle complex 8 [Source:ZFIN;Acc:ZDB-GENE-130530-601]
79. ISM2 ISM2 1710 1.534 - 0.717 - - - 0.817 - - -
80. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.531 - 0.754 - - - 0.777 - - - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
81. C7H4orf48 C7H4orf48 1455 1.531 - 0.749 - - - 0.782 - - -
82. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.528 - - 0.779 - - 0.749 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
83. mrps21 ENSDARG00000070985 3943 1.528 0.712 - - - - - 0.816 - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]
84. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.527 - 0.726 - - - - 0.801 - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
85. tead1a ENSDARG00000028159 3574 1.52 - - - - - 0.718 0.802 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
86. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.519 - - - - - 0.718 0.801 - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
87. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.507 - 0.739 - - - 0.768 - - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
88. tgfbrap1 ENSDARG00000061508 504 1.496 - 0.725 - - - 0.771 - - - transforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
89. kmt2a ENSDARG00000004537 2169 1.495 - 0.723 - - - 0.772 - - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
90. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.49 - - - - - 0.716 0.774 - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
91. kidins220b ENSDARG00000017338 1937 1.488 - 0.776 - - - - 0.712 - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
92. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.486 - 0.744 - - - - 0.742 - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
93. col6a6 col6a6 1165 1.484 - 0.754 - - - - 0.730 - -
94. coro1b ENSDARG00000008660 1220 1.48 - - - - - 0.750 0.730 - - coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]
95. tacc1 ENSDARG00000073753 1127 1.464 - 0.762 - - - - 0.702 - - transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
96. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.459 - - - - - 0.707 0.752 - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
97. ppp2r1b ppp2r1b 3469 1.451 0.744 - - - - 0.707 - - -
98. emp1 ENSDARG00000069632 251 1.445 - 0.715 - - - 0.730 - - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
99. exosc1 ENSDARG00000059841 6895 1.443 - 0.737 - - - - 0.706 - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
100. schip1 ENSDARG00000035175 3838 1.438 - - - - - 0.705 0.733 - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]

There are 1537 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA