Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srsf1a

Gene Name Gene ID Reads Annotation
srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]










Genes with expression patterns similar to srsf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
2. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 3.416 - - - 0.861 - 0.992 - 0.817 0.746 cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
3. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.663 - - - 0.866 - 0.986 - - 0.811 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
4. rpl4 ENSDARG00000041182 18655 2.623 0.805 - - 0.823 - - 0.995 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
5. bzw1a ENSDARG00000010481 28451 2.591 - - - 0.756 - 0.988 - - 0.847 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
6. zgc:101846 15202 2.424 - - - - - 0.981 - 0.707 0.736 zgc:101846
7. ilf2 ENSDARG00000014591 14543 2.401 - - - - - 0.727 - 0.806 0.868 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
8. lmnb2 ENSDARG00000101624 11304 2.362 - - - - 0.803 - - 0.768 0.791 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
9. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.348 0.862 - 0.700 - - - - - 0.786 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
10. dkc1 ENSDARG00000016484 7088 2.267 0.793 - - - 0.763 - - - 0.711 dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
11. sf3b14 sf3b14 9434 2.266 - 0.755 - - 0.801 - - - 0.710
12. ube2i ube2i 13024 1.975 - 0.984 - - - 0.991 - - -
13. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.883 - - - - 0.890 0.993 - - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
14. ppp1cab ENSDARG00000071566 4350 1.856 0.863 - - - - 0.993 - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
15. CR936437.1 CR936437.1 6465 1.854 - - - - - 0.990 - - 0.864
16. selt2 12741 1.834 - - - 0.835 - - 0.999 - - selenoprotein T, 2
17. scinla ENSDARG00000102415, ENSDARG00000117110 1996 1.83 0.842 - - - - 0.988 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
18. eif3c ENSDARG00000016443 18003 1.829 - - - 0.839 - 0.990 - - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
19. rhoad rhoad 8007 1.817 0.819 - - - - - 0.998 - -
20. mybpc3 ENSDARG00000011615 7271 1.808 0.822 - - - - - 0.986 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
21. HNRNPAB HNRNPAB 22267 1.77 - - - 0.831 - - - - 0.939
22. kpnb1 ENSDARG00000104889 9282 1.766 - - - - - - 0.999 - 0.767 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
23. c9 ENSDARG00000016319 3917 1.761 0.820 - - - - 0.941 - - - complement component 9 [Source:ZFIN;Acc:ZDB-GENE-050522-442]
24. ELOVL4 ELOVL4 3026 1.757 - - - - - 0.992 - - 0.765
25. hnrnpm ENSDARG00000061735 19428 1.745 0.868 - - - - - - - 0.877 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
26. hnrnpua ENSDARG00000015206 4012 1.74 - - - - - 0.992 - 0.748 - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
27. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.73 - - - - - - - 0.825 0.905 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
28. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.729 - 0.766 - - - - 0.963 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
29. sdc4 ENSDARG00000059906 10105 1.725 - - - - 0.761 0.964 - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
30. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.719 - 0.947 - - - - - - 0.772 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
31. rbb4 rbb4 15541 1.713 0.804 - - - - - - - 0.909
32. MKI67 ENSDARG00000091150 11038 1.708 - - - - 0.860 - - - 0.848 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
33. carm1 ENSDARG00000018698 5599 1.701 0.873 - - - - - - - 0.828 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
34. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.697 0.925 - - - - - - 0.772 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
35. hspa9 ENSDARG00000003035, ENSDARG00000114629 13898 1.697 0.713 - - - - 0.984 - - - heat shock protein 9 [Source:ZFIN;Acc:ZDB-GENE-030828-12]
36. luc7l3 ENSDARG00000014366 4416 1.697 - - - - - 0.980 - - 0.717 LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
37. MARK4 ENSDARG00000024966 3377 1.68 0.830 - - 0.850 - - - - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
38. rrm1 ENSDARG00000014017 7296 1.678 - - - - 0.848 - - - 0.830 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
39. nova2 ENSDARG00000017673 7685 1.676 - - - - 0.833 - - - 0.843 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
40. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.674 0.881 - - - - - - - 0.793 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
41. h2afvb ENSDARG00000116491 35692 1.667 - - - - - - 0.893 0.774 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
42. zswim5 ENSDARG00000055900 4243 1.664 - - - - - - - 0.813 0.851 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
43. rps27.1 ENSDARG00000023298 86382 1.662 - 0.794 - - - 0.868 - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
44. rpl35 ENSDARG00000018334 69583 1.643 - - - 0.720 - - 0.923 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
45. rpa2 ENSDARG00000037188 4284 1.641 - - - 0.855 0.786 - - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
46. kif11 ENSDARG00000010948 4973 1.639 - - - 0.853 - - - - 0.786 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
47. nop58 ENSDARG00000104353 8497 1.636 - - - 0.857 - - - - 0.779 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
48. khdrbs1a ENSDARG00000052856 53666 1.636 - - - - 0.864 - - 0.772 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
49. tcea1 ENSDARG00000003531 2912 1.636 - - - - - - - 0.880 0.756 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
50. whsc1l1 8544 1.634 - - - - - - - 0.704 0.930 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
51. ak2 ENSDARG00000005926 7598 1.632 - - - 0.856 0.776 - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
52. hnrnpa0a ENSDARG00000089302 45675 1.629 - - - 0.769 - 0.860 - - - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
53. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.628 0.874 0.754 - - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
54. foxp4 ENSDARG00000076120 9458 1.613 - - - 0.862 - - - 0.751 - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
55. dhx15 ENSDARG00000015392 7496 1.612 - - - - 0.795 - - - 0.817 DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
56. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.609 - 0.863 - - - - - - 0.746 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
57. gpsm1a ENSDARG00000092517 784 1.605 - - - 0.851 - - - - 0.754 G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
58. cfl1 ENSDARG00000021124 78399 1.605 - 0.752 - - - - - 0.853 - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
59. hnrnph1l ENSDARG00000005551 8727 1.603 0.853 0.750 - - - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
60. hnrnpub ENSDARG00000004735 16496 1.597 - - - - - - - 0.713 0.884 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
61. fubp1 ENSDARG00000029248 15259 1.596 - - - - 0.852 - - 0.744 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
62. CABZ01081490.1 ENSDARG00000111653 11892 1.595 - 0.751 - 0.844 - - - - -
63. ubap2 ubap2 4167 1.594 - - - - - - - 0.802 0.792
64. fam60al 2846 1.594 - - - - - - - 0.766 0.828 family with sequence similarity 60, member A, like
65. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.579 - - - - - - - 0.786 0.793 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
66. marcksa ENSDARG00000004049 2518 1.574 - - - - - - - 0.739 0.835 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
67. safb ENSDARG00000020467 5608 1.574 - - - - - - - 0.749 0.825 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
68. dla ENSDARG00000010791 9281 1.572 - - - - 0.763 - - - 0.809 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
69. mta2 ENSDARG00000013031 2932 1.572 - - - - - - - 0.759 0.813 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
70. arnt2 ENSDARG00000103697 5731 1.57 - - - - - - - 0.779 0.791 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
71. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.569 - - - 0.861 - - - 0.708 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
72. ywhaqb ENSDARG00000023323 28138 1.569 - 0.800 - - - - - 0.769 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
73. ADAM22 ENSDARG00000060532 2259 1.566 - - - 0.855 - - - - 0.711 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
74. TAF15 ENSDARG00000070019 5102 1.563 - - - - - - - 0.765 0.798 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
75. slbp ENSDARG00000100558 3405 1.561 - - - - - - - 0.830 0.731 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
76. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.561 - - - - - - - 0.741 0.820 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
77. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 1.56 - - - 0.856 - - - - 0.704 SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
78. scrt2 ENSDARG00000056175 4331 1.559 - - - 0.857 0.702 - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
79. serinc1 ENSDARG00000009106 10571 1.558 - - 0.789 - - - - - 0.769 serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
80. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.557 0.845 - - - - - - 0.712 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
81. seh1l ENSDARG00000004280 2915 1.556 - - - 0.856 - - - - 0.700 SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
82. snrnp70 ENSDARG00000077126 5921 1.553 - - - - - - - 0.806 0.747 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
83. mcm2 ENSDARG00000102798 8148 1.549 - - - - - - - 0.760 0.789 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
84. prpf40a ENSDARG00000058467 6565 1.547 - - - - 0.764 - - - 0.783 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
85. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.545 - - - - - - - 0.747 0.798 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
86. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.544 - 0.759 - - - - - - 0.785 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
87. gnao1a ENSDARG00000016676 8184 1.542 - - - - - - - 0.735 0.807 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
88. ptmab ENSDARG00000101766 182812 1.54 - - 0.755 - - - - 0.785 - prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
89. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.538 - 0.758 - - - - - 0.780 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
90. ezh2 ENSDARG00000010571 3273 1.537 - - - - 0.715 - - - 0.822 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
91. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.536 0.824 - - - - - - - 0.712 protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
92. gpm6ab ENSDARG00000004621 5825 1.535 - - - - - - - 0.727 0.808 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
93. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.533 - - - - - - - 0.743 0.790 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
94. lmnb1 ENSDARG00000044299 9817 1.533 - - - - 0.740 - - 0.793 - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
95. amer2 ENSDARG00000075222 594 1.532 - - - - - - - 0.784 0.748 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
96. uhrf1 ENSDARG00000103409 3282 1.531 - - - - - - - 0.785 0.746 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
97. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.531 - - - - - - - 0.723 0.808 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
98. uck2a ENSDARG00000006074 1554 1.53 - - - - - - - 0.816 0.714 uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
99. snrpa ENSDARG00000018890 4593 1.528 - - - - - - - 0.799 0.729 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
100. celf3a ENSDARG00000034668 2432 1.522 - - - - - - - 0.731 0.791 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]

There are 957 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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