Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srsf11

Gene Name Gene ID Reads Annotation
srsf11 ENSDARG00000098574 12801 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]










Genes with expression patterns similar to srsf11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf11 ENSDARG00000098574 12801 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
2. znf292a ENSDARG00000016763 2253 3.043 - 0.857 - - - - 0.721 0.726 0.739 zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
3. rbm4.2 ENSDARG00000055080 5241 2.714 0.898 - - - - 0.983 - - 0.833 RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
4. pfdn1 ENSDARG00000014536 6969 2.661 - - 0.777 0.918 - 0.966 - - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
5. rbb4 rbb4 15541 2.661 - - - 0.905 - - 0.894 - 0.862
6. map1lc3b ENSDARG00000101127 3958 2.633 0.928 - - - - 0.973 0.732 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
7. hmgb3a ENSDARG00000056725 15668 2.609 - - - 0.888 - - 0.822 - 0.899 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
8. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 2.609 0.903 - - 0.931 - - 0.775 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
9. lsm4 ENSDARG00000023852 6083 2.564 0.941 0.875 0.748 - - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
10. clint1a ENSDARG00000025535 4965 2.537 0.801 - 0.764 - - 0.972 - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
11. dkc1 ENSDARG00000016484 7088 2.521 - 0.817 - 0.943 - - - - 0.761 dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
12. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.508 0.926 - - - - - 0.817 - 0.765 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
13. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.506 0.932 - - - - - 0.826 - 0.748 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
14. brd7 ENSDARG00000008380 3654 2.487 - - 0.830 0.925 - - 0.732 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
15. arid4a ENSDARG00000043873 4176 2.486 - 0.845 0.810 - - - 0.831 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
16. smarca5 ENSDARG00000052348 15433 2.486 0.959 - - - - - 0.741 - 0.786 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
17. srsf3b ENSDARG00000059360 14888 2.478 - - - 0.921 - - - 0.757 0.800 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
18. zgc:110425 ENSDARG00000058479 5216 2.462 - 0.879 0.777 - - - - - 0.806 zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
19. rrm1 ENSDARG00000014017 7296 2.461 - - - - - 0.982 0.726 - 0.753 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
20. eif3f ENSDARG00000077533 24387 2.445 - - - - - 0.945 0.712 - 0.788 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
21. hnrpl 6412 2.436 0.939 - - - - - 0.728 - 0.769 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
22. cfl1 ENSDARG00000021124 78399 2.42 0.867 - - - - 0.819 0.734 - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
23. whsc1l1 8544 2.416 - - 0.733 - - - 0.799 - 0.884 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
24. mcm4 ENSDARG00000040041 7971 2.408 - - - 0.904 - - 0.745 - 0.759 minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
25. si:dkeyp-44a8.2 ENSDARG00000092493 8308 2.392 - - 0.702 - - 0.974 0.716 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
26. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.376 0.751 - - 0.767 - - - - 0.858 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
27. hmgb2b ENSDARG00000053990 11519 2.371 - - 0.791 - - - 0.846 - 0.734 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
28. caprin1b ENSDARG00000054272 7033 2.344 - 0.852 - - - - 0.708 - 0.784 cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
29. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.294 - 0.812 - - - - 0.726 0.756 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
30. cdv3 ENSDARG00000023028 12380 2.28 0.847 - - - - - - 0.711 0.722 carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
31. tmem258 ENSDARG00000078785 9578 2.271 0.787 - 0.782 - - - - 0.702 - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
32. snrpd3l ENSDARG00000076283 7655 2.221 - - - - - - 0.783 0.724 0.714 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
33. anp32a ENSDARG00000006487 28249 2.214 - - - 0.724 - - 0.710 - 0.780 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
34. tjp1a ENSDARG00000077506 2658 1.878 - - - 0.910 - 0.968 - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
35. kpnb1 ENSDARG00000104889 9282 1.876 - 0.892 - - - 0.984 - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
36. rb1 ENSDARG00000006782 1445 1.876 - - - 0.908 - 0.968 - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
37. egfra ENSDARG00000013847 2912 1.861 0.883 - - - - 0.978 - - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
38. xpot ENSDARG00000099652 3026 1.844 0.912 - - 0.932 - - - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
39. myeov2 3351 1.843 0.914 - - 0.929 - - - - - myeloma overexpressed 2
40. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.832 0.931 - - - - - 0.901 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
41. gnai2a ENSDARG00000018174 6549 1.831 - 0.868 - - - 0.963 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8365]
42. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.827 - 0.864 - - - 0.963 - - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
43. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.814 0.933 0.881 - - - - - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
44. phlda3 ENSDARG00000037804 1116 1.811 - 0.846 - - - 0.965 - - - pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
45. gpx4b ENSDARG00000076836 8085 1.804 0.870 0.934 - - - - - - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
46. creb3l1 ENSDARG00000015793 1988 1.789 - 0.828 - - - 0.961 - - - cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
47. NDNF ENSDARG00000062936 7287 1.786 - 0.819 - - - 0.967 - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
48. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.78 0.873 - - 0.907 - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
49. tmx2b ENSDARG00000007786 3151 1.774 - - - - - 0.967 0.807 - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
50. rrm2 ENSDARG00000020711, ENSDARG00000078069 1280 1.773 - 0.893 - - - - - - 0.880 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
51. tp53inp1 ENSDARG00000028017 2184 1.773 - - - - - 0.970 - - 0.803 tumor protein p53 inducible nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-031018-3]
52. eif1b ENSDARG00000012688 34711 1.773 0.923 0.850 - - - - - - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
53. sdr16c5a ENSDARG00000016233 2413 1.77 0.811 - - - - 0.959 - - - short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
54. nusap1 ENSDARG00000002403 6953 1.766 - 0.822 - 0.944 - - - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
55. slc16a12b ENSDARG00000089885 3744 1.762 0.808 - - - - 0.954 - - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
56. efnb3b ENSDARG00000042277 5823 1.759 - - - 0.934 - - - 0.825 - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
57. mxd3 ENSDARG00000098350 3040 1.759 - 0.819 - 0.940 - - - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
58. lman2 ENSDARG00000061854 6251 1.754 - - - - - 0.981 0.773 - - lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
59. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.753 - - - - - 0.978 0.775 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
60. mrpl19 ENSDARG00000011885 2208 1.748 0.921 0.827 - - - - - - - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
61. HNRNPA2B1 HNRNPA2B1 14997 1.747 - - - - - 0.976 0.771 - -
62. tcf12 ENSDARG00000004714 7606 1.746 - - - - - 0.976 - - 0.770 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
63. cpe ENSDARG00000055874, ENSDARG00000116033 2981 1.742 - - - - - 0.971 0.771 - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
64. chpt1 ENSDARG00000014572 2926 1.741 0.781 - - - - 0.960 - - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
65. cdc34b ENSDARG00000012627 3879 1.734 - - - 0.928 - - 0.806 - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
66. fam102bb ENSDARG00000002333 1483 1.73 - - - 0.912 - - 0.818 - - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
67. HNRNPAB HNRNPAB 22267 1.727 - - - - - - 0.866 - 0.861
68. cab39 ENSDARG00000043451 1326 1.726 0.903 0.823 - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
69. hdac1 ENSDARG00000015427 19804 1.723 - - - 0.855 - - - - 0.868 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
70. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.716 - 0.870 - - - - - - 0.846 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
71. meaf6 ENSDARG00000101216 6865 1.71 - - - - - 0.974 0.736 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
72. AL929434.1 AL929434.1 3294 1.709 - - 0.744 - - 0.965 - - -
73. fam60al 2846 1.708 - - - - - - 0.842 - 0.866 family with sequence similarity 60, member A, like
74. ptp4a1 ENSDARG00000006242 10267 1.707 - - - - - 0.965 - - 0.742 protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
75. mapk3 ENSDARG00000070573 6842 1.706 0.809 - - 0.897 - - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
76. FP085405.1 FP085405.1 5189 1.704 - - - - - - 0.891 - 0.813
77. wu:fc51f04 wu:fc51f04 7074 1.703 0.947 - - - - - - - 0.756
78. TNRC6A ENSDARG00000079688 14433 1.702 - 0.866 - - - - 0.836 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
79. Sep-02 Sep-02 10074 1.7 - 0.902 - - - - 0.798 - -
80. irf2bp2a ENSDARG00000004702 6719 1.7 - - - - - 0.971 0.729 - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
81. dpy30 ENSDARG00000004427 7112 1.699 0.875 - - - - - - - 0.824 dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
82. nop2 ENSDARG00000043304 2511 1.693 - - 0.779 0.914 - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
83. anp32b ENSDARG00000023330 25013 1.693 - - - 0.926 - - 0.767 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
84. ddx39ab ENSDARG00000015111 11619 1.689 - - - - - - 0.804 - 0.885 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
85. epn2 ENSDARG00000008377 5458 1.689 0.909 - 0.780 - - - - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
86. eif3s10 ENSDARG00000076815 10822 1.689 - - - 0.952 - - - - 0.737 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
87. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.684 - - - 0.905 - - - 0.779 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
88. itsn1 ENSDARG00000000086 684 1.683 0.888 - 0.795 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
89. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.682 - 0.939 - - - - - - 0.743 heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
90. ywhah ENSDARG00000005560 11079 1.678 - - 0.713 - - 0.965 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
91. snrpe ENSDARG00000033175 7462 1.677 - - - 0.940 - - 0.737 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
92. GIT1 ENSDARG00000039489 1157 1.675 0.891 - 0.784 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
93. SSBP4 ENSDARG00000056483 5156 1.674 - - - 0.928 - - - 0.746 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
94. skia ENSDARG00000042151 1850 1.674 0.836 0.838 - - - - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
95. arpc4l ENSDARG00000058225 10107 1.673 0.806 - - 0.867 - - - - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
96. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.672 - - - - - - 0.759 - 0.913 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
97. lmnb1 ENSDARG00000044299 9817 1.669 - 0.846 - - - - 0.823 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
98. stk38a ENSDARG00000019973 1343 1.668 0.880 - 0.788 - - - - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
99. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.667 0.860 - - - - - 0.807 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
100. smc1al ENSDARG00000058203 8838 1.666 - - - - - - 0.801 - 0.865 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]

There are 1529 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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