Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srrm4

Gene Name Gene ID Reads Annotation
srrm4 ENSDARG00000086327 153 serine/arginine repetitive matrix 4 [Source:ZFIN;Acc:ZDB-GENE-050208-34]










Genes with expression patterns similar to srrm4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srrm4 ENSDARG00000086327 153 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine repetitive matrix 4 [Source:ZFIN;Acc:ZDB-GENE-050208-34]
2. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.77 - 0.900 - 0.870 - - - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
3. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 1.733 - 0.885 - 0.848 - - - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
4. TEX264 TEX264 283 1.715 0.857 0.858 - - - - - - -
5. hltf ENSDARG00000026053 115 1.6 0.774 - - 0.826 - - - - - helicase-like transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-3306]
6. ppp1r12c ENSDARG00000052423 183 1.584 - 0.863 - 0.721 - - - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
7. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 1.578 - - - 0.805 - - 0.773 - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
8. CABZ01020188.2 CABZ01020188.2 114 1.517 0.738 - - - - - 0.779 - -
9. chmp3 ENSDARG00000038064 577 1.497 - 0.770 - 0.727 - - - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
10. ccdc51 ENSDARG00000058828 436 1.46 - 0.754 - 0.706 - - - - - coiled-coil domain containing 51 [Source:ZFIN;Acc:ZDB-GENE-060825-200]
11. zgc:103508 ENSDARG00000099273 50 1 - - - - - - 1.000 - - zgc:103508 [Source:ZFIN;Acc:ZDB-GENE-041212-28]
12. vhll ENSDARG00000078613 87 0.956 - - - - - 0.956 - - - von Hippel-Lindau tumor suppressor like [Source:ZFIN;Acc:ZDB-GENE-081022-78]
13. CABZ01038494.1 ENSDARG00000088258 908 0.954 - 0.954 - - - - - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
14. CLDN22 CLDN22 114 0.938 - - - - - 0.938 - - -
15. CEP170B ENSDARG00000074636 336 0.935 - 0.935 - - - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
16. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 0.934 - 0.934 - - - - - - - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
17. cacna1sa ENSDARG00000029457 883 0.932 - 0.932 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
18. CABIN1 ENSDARG00000079326 905 0.929 - 0.929 - - - - - - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
19. si:ch211-197g15.8 ENSDARG00000094984 218 0.926 - 0.926 - - - - - - - si:ch211-197g15.8 [Source:ZFIN;Acc:ZDB-GENE-050208-377]
20. minpp1b ENSDARG00000045172 174 0.924 - 0.924 - - - - - - - multiple inositol-polyphosphate phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-888]
21. kmt2ba ENSDARG00000062962 1572 0.92 - 0.920 - - - - - - - lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]
22. il6st ENSDARG00000104693 55 0.918 - 0.918 - - - - - - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
23. vps18 ENSDARG00000070433 320 0.917 - 0.917 - - - - - - - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
24. arl6ip5b ENSDARG00000016238 1622 0.916 - 0.916 - - - - - - - ADP-ribosylation factor-like 6 interacting protein 5b [Source:ZFIN;Acc:ZDB-GENE-040718-223]
25. rnf123 ENSDARG00000031269 519 0.913 - 0.913 - - - - - - - ring finger protein 123 [Source:ZFIN;Acc:ZDB-GENE-050208-529]
26. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 0.913 - 0.913 - - - - - - - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
27. pfas ENSDARG00000003750 296 0.911 - 0.911 - - - - - - - phosphoribosylformylglycinamidine synthase [Source:ZFIN;Acc:ZDB-GENE-030131-4420]
28. CABZ01032488.1 ENSDARG00000099154 262 0.911 - 0.911 - - - - - - - wu:fb14d09 [Source:NCBI gene;Acc:100536795]
29. st3gal2l st3gal2l 393 0.91 - 0.910 - - - - - - -
30. abhd14b ENSDARG00000100531 333 0.91 - 0.910 - - - - - - - abhydrolase domain containing 14B [Source:ZFIN;Acc:ZDB-GENE-040426-1342]
31. LRRC8E LRRC8E 495 0.909 - 0.909 - - - - - - -
32. lpar2a ENSDARG00000042338 285 0.908 - 0.908 - - - - - - - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
33. CLCN4 ENSDARG00000035808 397 0.906 - 0.906 - - - - - - - chloride channel, voltage-sensitive 4 [Source:ZFIN;Acc:ZDB-GENE-061013-353]
34. myrf ENSDARG00000078676 614 0.905 - 0.905 - - - - - - - myelin regulatory factor [Source:ZFIN;Acc:ZDB-GENE-080204-57]
35. RBM22 ENSDARG00000010238 493 0.905 - 0.905 - - - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
36. rassf7b ENSDARG00000003193 460 0.905 - 0.905 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7b [Source:ZFIN;Acc:ZDB-GENE-030429-1]
37. si:dkeyp-1h4.8 208 0.905 - 0.905 - - - - - - - si:dkeyp-1h4.8
38. tlcd1 ENSDARG00000002391 90 0.904 - 0.904 - - - - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
39. prom1a ENSDARG00000039966 227 0.904 - 0.904 - - - - - - - prominin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1577]
40. tlr5b ENSDARG00000052322 86 0.904 - 0.904 - - - - - - - toll-like receptor 5b [Source:ZFIN;Acc:ZDB-GENE-040219-15]
41. ap5m1 ENSDARG00000031533 153 0.904 - 0.904 - - - - - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
42. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.903 - 0.903 - - - - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
43. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 0.902 - 0.902 - - - - - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
44. grin2ab ENSDARG00000070543 31 0.902 - 0.902 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
45. TUBB8P7_2 TUBB8P7_2 565 0.902 - 0.902 - - - - - - -
46. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.902 - 0.902 - - - - - - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
47. st8sia4 ENSDARG00000103600 198 0.9 - 0.900 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-10]
48. si:dkey-222h21.11 ENSDARG00000092984 13 0.9 - 0.900 - - - - - - - si:dkey-222h21.11 [Source:ZFIN;Acc:ZDB-GENE-081031-32]
49. si:dkey-7f3.14 ENSDARG00000095050 18 0.9 - 0.900 - - - - - - - si:dkey-7f3.14 [Source:ZFIN;Acc:ZDB-GENE-100922-186]
50. slc52a3 ENSDARG00000042737 67 0.9 - 0.900 - - - - - - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
51. BX927369.7 BX927369.7 12 0.9 - 0.900 - - - - - - -
52. si:dkey-234l24.7 ENSDARG00000113738 8 0.9 - 0.900 - - - - - - - si:dkey-234l24.7 [Source:ZFIN;Acc:ZDB-GENE-050420-90]
53. capn3b ENSDARG00000043035, ENSDARG00000113539 229 0.9 - 0.900 - - - - - - - calpain 3b [Source:ZFIN;Acc:ZDB-GENE-041001-149]
54. CU694368.1 CU694368.1 56 0.9 - 0.900 - - - - - - -
55. si:ch211-149a19.3 ENSDARG00000079456 115 0.9 - 0.900 - - - - - - - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
56. si:dkey-269o24.7 si:dkey-269o24.7 28 0.9 - 0.900 - - - - - - -
57. si:dkey-71l1.1 ENSDARG00000052411 11 0.9 - 0.900 - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
58. BX547934.1 ENSDARG00000097061 35 0.9 - 0.900 - - - - - - -
59. kcnj1b ENSDARG00000002666 87 0.9 - 0.900 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
60. SAMD9L SAMD9L 10 0.9 - 0.900 - - - - - - -
61. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 0.9 - 0.900 - - - - - - -
62. glt8d1 ENSDARG00000040157 120 0.899 - 0.899 - - - - - - - glycosyltransferase 8 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-23]
63. SLC16A3 ENSDARG00000045051 83 0.899 - 0.899 - - - - - - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
64. crym ENSDARG00000062817 171 0.899 - 0.899 - - - - - - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
65. RHBDF1 RHBDF1 131 0.899 - 0.899 - - - - - - -
66. MSR1 MSR1 449 0.898 - 0.898 - - - - - - -
67. MPV17L MPV17L 39 0.898 - 0.898 - - - - - - -
68. crebrf ENSDARG00000105114 21 0.896 - 0.896 - - - - - - - creb3 regulatory factor [Source:ZFIN;Acc:ZDB-GENE-120203-3]
69. CABZ01058048.1 CABZ01058048.1 268 0.895 - 0.895 - - - - - - -
70. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 0.895 - 0.895 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
71. zp2.1 ENSDARG00000086352 41 0.894 - 0.894 - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
72. CU638695.1 CU638695.1 90 0.894 - 0.894 - - - - - - -
73. rgl3a ENSDARG00000071213 350 0.894 - 0.894 - - - - - - - ral guanine nucleotide dissociation stimulator-like 3a [Source:ZFIN;Acc:ZDB-GENE-101130-1]
74. keap1a ENSDARG00000016132 363 0.894 - 0.894 - - - - - - - kelch-like ECH-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-556]
75. atad1a ENSDARG00000023267 155 0.893 - 0.893 - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
76. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 0.893 - 0.893 - - - - - - - cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
77. btbd2 btbd2 1296 0.892 - 0.892 - - - - - - -
78. pm20d1.2 ENSDARG00000062096 97 0.892 - 0.892 - - - - - - - peptidase M20 domain containing 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061013-637]
79. hexa ENSDARG00000052113, ENSDARG00000111134 228 0.892 - 0.892 - - - - - - - hexosaminidase A (alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-050417-283]
80. g6pca.1 ENSDARG00000031616 401 0.892 - 0.892 - - - - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
81. agtrap ENSDARG00000077082, ENSDARG00000114680 329 0.891 - 0.891 - - - - - - - angiotensin II receptor-associated protein [Source:ZFIN;Acc:ZDB-GENE-050309-11]
82. HNRNPUL2 HNRNPUL2 110 0.891 - 0.891 - - - - - - -
83. cxadr ENSDARG00000043658, ENSDARG00000110210, ENSDARG00000111984 451 0.89 - 0.890 - - - - - - - CXADR, Ig-like cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-020814-2]
84. pigt ENSDARG00000075842 210 0.889 - 0.889 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
85. SYT7 SYT7 45 0.889 - 0.889 - - - - - - -
86. si:ch73-367f21.6 ENSDARG00000089953 46 0.889 - 0.889 - - - - - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
87. ppp2r2c ppp2r2c 441 0.888 - 0.888 - - - - - - -
88. dnmt3 dnmt3 1912 0.887 - 0.887 - - - - - - -
89. clstn2 ENSDARG00000060637 548 0.887 - 0.887 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
90. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.887 - 0.887 - - - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
91. PLA2G3_1 PLA2G3_1 411 0.886 - 0.886 - - - - - - -
92. btr02 ENSDARG00000052215 401 0.882 - 0.882 - - - - - - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
93. zbtb12.2 ENSDARG00000070658 55 0.882 - - - - - - 0.882 - - zinc finger and BTB domain containing 12, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-27]
94. krt1-c5 ENSDARG00000026979 325 0.881 - - - 0.881 - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
95. kdelr3 ENSDARG00000040912 556 0.881 - 0.881 - - - - - - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
96. zgc:77056 ENSDARG00000029615 297 0.881 - 0.881 - - - - - - - zgc:77056 [Source:ZFIN;Acc:ZDB-GENE-030131-5248]
97. crfb16 ENSDARG00000075181 40 0.881 - 0.881 - - - - - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
98. ZFHX3 ENSDARG00000103057 7759 0.88 - 0.880 - - - - - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
99. arhgef25b ENSDARG00000014465 669 0.88 - 0.880 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
100. si:ch211-198c19.2 si:ch211-198c19.2 165 0.88 - - - - - - 0.880 - -

There are 626 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA