Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srpk3

Gene Name Gene ID Reads Annotation
srpk3 ENSDARG00000005916 1546 SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]










Genes with expression patterns similar to srpk3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srpk3 ENSDARG00000005916 1546 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
2. hhatla ENSDARG00000039051 6598 4.032 0.862 0.884 - 0.730 0.736 - 0.820 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
3. gstm gstm 4064 3.304 0.856 0.875 - - - 0.789 0.784 - -
4. trdn ENSDARG00000041779 4283 3.296 0.787 0.887 - - 0.777 - 0.845 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
5. limch1a ENSDARG00000074275 2981 3.224 0.741 0.880 0.739 - - - 0.864 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
6. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 3.216 0.710 0.901 - - 0.772 - 0.833 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
7. mef2cb ENSDARG00000009418 1124 3.207 0.717 0.881 - - - - 0.818 0.791 - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
8. fgf6a ENSDARG00000009351 799 3.028 0.712 0.735 - - - 0.790 0.791 - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
9. srl ENSDARG00000104587 11126 2.705 0.868 0.935 - - - - 0.902 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
10. FHOD3_1 FHOD3_1 983 2.7 0.885 0.873 - - - - 0.942 - -
11. pbxip1a ENSDARG00000071015 4960 2.69 0.880 0.919 - - - - 0.891 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
12. pygma ENSDARG00000055518 15972 2.676 0.882 0.925 - - - - 0.869 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
13. CR847973.1 ENSDARG00000115516 8754 2.646 0.901 0.823 - - - - 0.922 - -
14. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.63 0.832 0.947 - - - - 0.851 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
15. EHBP1L1 EHBP1L1 2500 2.628 0.860 0.895 - - - - 0.873 - -
16. chrna1 ENSDARG00000009021 2931 2.627 0.875 0.894 - - - - 0.858 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
17. txlnbb ENSDARG00000076241 6396 2.627 0.860 0.955 - - - - 0.812 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
18. klhl40a ENSDARG00000039052 2537 2.614 0.828 0.922 - - - - 0.864 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
19. hspg2 ENSDARG00000076564 3440 2.608 0.764 0.911 - - - - 0.933 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
20. BX294434.1 ENSDARG00000061272 6493 2.608 0.808 0.935 - - - - 0.865 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
21. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.606 0.771 0.887 - - - - 0.948 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
22. mybpc2b ENSDARG00000021265 9618 2.605 0.901 0.903 - - - - 0.801 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
23. mybphb ENSDARG00000003081 5208 2.601 - 0.939 - - 0.748 - 0.914 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
24. usp28 ENSDARG00000008880 1850 2.6 0.839 0.878 - - - - 0.883 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
25. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.593 0.869 0.866 - - - - 0.858 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
26. ITGB1BP2 ENSDARG00000030176 2472 2.584 0.828 0.947 - - - - 0.809 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
27. fitm1 ENSDARG00000056464 1759 2.583 0.789 0.923 - - - - 0.871 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
28. sh3bgr ENSDARG00000021633 3498 2.581 0.792 0.939 - - - - 0.850 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
29. cfl2 ENSDARG00000014106 8051 2.576 0.826 0.912 - - - - 0.838 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
30. znf106a ENSDARG00000016651 6049 2.572 0.838 0.864 - - - - 0.870 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
31. stac3 ENSDARG00000098883 1765 2.571 0.773 0.892 - - - - 0.906 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
32. myod1 ENSDARG00000030110 6019 2.57 0.801 0.876 - - - - 0.893 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
33. ntmt1 ENSDARG00000022399 5779 2.564 0.809 0.910 - - - - 0.845 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
34. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.561 0.766 0.928 - - - - 0.867 - -
35. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.561 0.865 0.779 - - - - 0.917 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
36. C13H10orf71 3489 2.559 0.739 0.914 - - - - 0.906 - - chromosome 13 C10orf71 homolog
37. PHB2 PHB2 3755 2.552 0.749 0.910 - - - - 0.893 - -
38. TMPO TMPO 3264 2.551 0.790 0.851 - - - - 0.910 - -
39. TRIM63 TRIM63 1600 2.547 0.850 0.849 - - - - 0.848 - -
40. sptb ENSDARG00000030490 7128 2.546 0.746 0.917 - - - - 0.883 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
41. cacna2d1a ENSDARG00000014804 1924 2.539 0.805 0.869 - - - - 0.865 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
42. myhc4 ENSDARG00000035438 1322 2.529 0.828 0.917 - - - - 0.784 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
43. MYOT ENSDARG00000076312 1791 2.528 0.818 0.816 - - - - 0.894 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
44. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 2.525 - 0.884 - - 0.763 - 0.878 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
45. COL22A1 COL22A1 4473 2.525 0.764 0.862 - - - - 0.899 - -
46. alpk3a ENSDARG00000078989 1992 2.518 0.721 0.928 - - - - 0.869 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
47. gypc ENSDARG00000041546 1487 2.511 0.811 0.895 - - - - 0.805 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
48. klhl21 ENSDARG00000039255 2550 2.505 0.788 0.853 - - - - 0.864 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
49. TENC1 TENC1 1729 2.504 0.713 0.889 - - - - 0.902 - -
50. kcnma1a ENSDARG00000079840 2584 2.497 0.760 0.842 - - - - 0.895 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
51. zgc:153662 zgc:153662 4604 2.495 0.824 0.825 - - - - 0.846 - -
52. asb5b ENSDARG00000053222 1207 2.494 0.837 0.882 - - - - 0.775 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
53. six1b ENSDARG00000026473 1908 2.488 0.764 0.840 - - - - 0.884 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
54. prx ENSDARG00000017246 6183 2.487 0.724 0.872 - - - - 0.891 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
55. cap2 ENSDARG00000104478 3266 2.486 0.803 0.838 - - - - 0.845 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
56. xirp2a ENSDARG00000071113 7113 2.485 0.774 0.898 - - - - 0.813 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
57. tnc ENSDARG00000021948, ENSDARG00000113518 12162 2.483 0.845 0.891 - - - - 0.747 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
58. NRAP ENSDARG00000009341 3565 2.476 0.775 0.871 - - - - 0.830 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
59. chrnd ENSDARG00000019342 2728 2.474 0.723 0.907 - - - - 0.844 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
60. cacng1 cacng1 3118 2.473 0.799 0.925 - - - - 0.749 - -
61. hapln1a ENSDARG00000089769 12334 2.47 0.801 0.847 - - - - 0.822 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
62. pvalb4 ENSDARG00000024433 35736 2.454 0.867 - - - 0.708 - 0.879 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
63. tns1 tns1 5891 2.452 - 0.882 - - - 0.772 0.798 - -
64. tnnt2d ENSDARG00000002988 7590 2.45 0.756 0.813 - - - - 0.881 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
65. synpo2lb ENSDARG00000078696 2361 2.445 0.817 0.749 - - - - 0.879 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
66. MYOM1 MYOM1 3870 2.445 0.742 0.823 - - - - 0.880 - -
67. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.438 0.740 - - - 0.789 - 0.909 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
68. AIMP1 ENSDARG00000060036 4136 2.437 0.802 0.912 - - 0.723 - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
69. enah ENSDARG00000032049 1526 2.437 0.756 0.857 - - - - 0.824 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
70. znf648 ENSDARG00000104823 1918 2.435 0.767 0.880 - - - - 0.788 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
71. myoz2a ENSDARG00000012311 1373 2.433 0.729 0.806 - - - - 0.898 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
72. SPEG SPEG 4017 2.43 0.846 - - - 0.702 - 0.882 - -
73. tgm1l1 ENSDARG00000102106 1437 2.429 - 0.931 - - 0.710 - 0.788 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
74. ryr3 ENSDARG00000071331 6795 2.419 0.704 0.856 - - - - 0.859 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
75. myhz2 ENSDARG00000012944 69921 2.418 0.844 - - - 0.743 - 0.831 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
76. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 2.414 - 0.836 - - - 0.830 0.748 - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
77. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 2.412 0.744 0.844 - - - - 0.824 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
78. ATP5J_2 ATP5J_2 2381 2.41 0.747 0.805 - - - - 0.858 - -
79. trim55a ENSDARG00000029596 2858 2.409 0.734 0.904 - - - - 0.771 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
80. casq1b ENSDARG00000018105 2643 2.402 0.720 0.813 - - - - 0.869 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
81. akap6 ENSDARG00000077295 1382 2.4 0.755 0.817 - - - - 0.828 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
82. alpk2 ENSDARG00000079637 1483 2.399 0.774 0.781 - - - - 0.844 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
83. PTPLA PTPLA 4044 2.396 0.703 0.880 - - - - 0.813 - -
84. si:ch211-242b18.1 ENSDARG00000054723 2929 2.391 - 0.884 - - 0.721 - 0.786 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
85. MYOM3 2720 2.391 0.716 0.805 - - - - 0.870 - - myomesin 3, transcript variant X2
86. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 2.387 - 0.736 - - - 0.804 0.847 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
87. aqp4 ENSDARG00000010565 624 2.386 0.750 0.887 - - - - 0.749 - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
88. nars ENSDARG00000061100 2948 2.375 0.736 0.807 - - - - 0.832 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
89. eef2l2 ENSDARG00000035256 6815 2.374 0.813 0.852 - - - - 0.709 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
90. BX530018.3 ENSDARG00000107022 614 2.37 0.717 0.864 - - - - 0.789 - -
91. enpp1 ENSDARG00000005789 3267 2.36 0.728 - - - - 0.767 0.865 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
92. arpp21 ENSDARG00000061081 892 2.358 0.724 0.847 - - - - 0.787 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
93. tmem47 ENSDARG00000057322 4691 2.358 0.737 0.797 - - - - 0.824 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
94. vgll2b ENSDARG00000053773 444 2.357 0.723 0.841 - - - - 0.793 - - vestigial-like family member 2b [Source:ZFIN;Acc:ZDB-GENE-050809-113]
95. CCK CCK 1826 2.357 - - - - - 0.890 0.760 0.707 -
96. ptp4a3 ENSDARG00000039997 1964 2.35 0.728 0.737 - - - 0.885 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
97. tomm34 ENSDARG00000001557 1874 2.342 0.709 0.785 - - - - 0.848 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
98. PTP4A3 ENSDARG00000039997 3814 2.339 0.783 0.833 - - - - 0.723 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
99. trim55b ENSDARG00000058158 586 2.339 - 0.750 - - - 0.842 0.747 - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
100. EEF1E1 ENSDARG00000071774 3806 2.332 - 0.827 - - - 0.766 0.739 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]

There are 2001 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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