Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srpk1b

Gene Name Gene ID Reads Annotation
srpk1b ENSDARG00000031560 2079 SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]










Genes with expression patterns similar to srpk1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srpk1b ENSDARG00000031560 2079 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
2. snrpd3l ENSDARG00000076283 7655 3.085 - - - 0.807 0.835 - 0.728 - 0.715 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
3. nxf1 ENSDARG00000055076 3251 2.612 - - - - 0.965 0.821 0.826 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
4. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.514 0.740 - - 0.848 - 0.926 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
5. marcksa ENSDARG00000004049 2518 2.512 - - - - 0.965 - 0.782 - 0.765 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
6. kdm1a ENSDARG00000060679 6152 2.45 - - 0.763 - 0.909 - 0.778 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
7. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.448 - - - - 0.962 0.783 0.703 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
8. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 2.416 - - - - 0.952 - 0.738 - 0.726 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
9. fen1 ENSDARG00000011404 3358 2.383 - - 0.704 - 0.961 - - - 0.718 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
10. nrarpb ENSDARG00000018958 6225 2.381 - - - 0.781 0.882 0.718 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
11. hcfc1b ENSDARG00000012519 3633 2.367 - - 0.760 - - 0.900 0.707 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
12. arhgef2 ENSDARG00000075819 2173 2.323 - - 0.712 - - 0.804 - - 0.807 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
13. hnrnpub ENSDARG00000004735 16496 2.31 - - - - - 0.737 0.820 - 0.753 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
14. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 2.302 - 0.749 - - - 0.798 0.755 - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
15. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.281 - - - 0.703 - 0.858 0.720 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
16. ezh2 ENSDARG00000010571 3273 2.253 - - 0.741 0.769 - - - - 0.743 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
17. irx3b ENSDARG00000031138 2538 2.218 - 0.755 - - - 0.760 0.703 - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
18. tmem35 ENSDARG00000052567 5685 2.183 - - - - 0.743 - 0.707 - 0.733 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
19. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.177 - - 0.740 - - - 0.733 - 0.704 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
20. LDLRAD4 LDLRAD4 1237 2.175 - - - - - 0.769 0.705 - 0.701
21. cdk2 ENSDARG00000026577 2835 2.159 - - - 0.740 - - 0.707 - 0.712 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
22. TUSC5_1 TUSC5_1 320 1.833 - - - - 0.946 0.887 - - -
23. msxe msxe 362 1.832 - - - - 0.950 0.882 - - -
24. nr2f1a ENSDARG00000052695 5037 1.791 - - - - 0.884 0.907 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
25. zic5 ENSDARG00000016022 1034 1.777 - - - - 0.956 0.821 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
26. UNKL ENSDARG00000037838 1086 1.77 - - - - 0.935 0.835 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
27. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 1.766 - - - - 0.963 - - 0.803 - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
28. fgf17 ENSDARG00000102778 136 1.758 - 0.830 - - - 0.928 - - - fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
29. phc2b_1 ENSDARG00000013224 1316 1.745 - 0.860 - - - 0.885 - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
30. clu ENSDARG00000010434 498 1.734 - 0.787 - - 0.947 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
31. SRGAP3 ENSDARG00000060309 5353 1.729 - - 0.777 - 0.952 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
32. CR759921.2 CR759921.2 583 1.727 - - - - 0.945 0.782 - - -
33. zgc:123105 ENSDARG00000003127 3061 1.727 - 0.758 - - 0.969 - - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
34. ccdc28b ENSDARG00000011222 528 1.724 - - - - 0.956 0.768 - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
35. fut8 fut8 652 1.722 - - - - 0.953 0.769 - - -
36. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.716 - 0.793 - - - 0.923 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
37. SGIP1 SGIP1 236 1.716 - 0.830 - - - 0.886 - - -
38. FP102071.1 ENSDARG00000097994 170 1.715 - 0.797 - - - 0.918 - - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
39. C1H10orf12 C1H10orf12 1663 1.715 - 0.768 - - - 0.947 - - -
40. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 1.714 - 0.759 - - 0.955 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
41. PMFBP1 ENSDARG00000101917 292 1.713 - 0.776 - - - 0.937 - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
42. si:dkey-22o22.2 ENSDARG00000102445 149 1.713 - 0.798 - - - 0.915 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
43. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.709 - - - - 0.966 0.743 - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
44. RAPH1 RAPH1 294 1.707 - 0.803 - - - 0.904 - - -
45. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.705 - - 0.735 - 0.970 - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
46. rcor2 ENSDARG00000008278 1678 1.703 - - - 0.822 - 0.881 - - - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
47. pdcd5 ENSDARG00000026072 3135 1.703 - - - - 0.941 - 0.762 - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
48. espl1 ENSDARG00000075354 818 1.701 - - - - - 0.905 0.796 - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
49. nuf2 ENSDARG00000034624 2252 1.699 - - - - 0.966 - 0.733 - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
50. ubp1 ENSDARG00000018000 1047 1.698 - - - - - 0.887 0.811 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
51. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.697 - - - - 0.948 0.749 - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
52. sox2 ENSDARG00000070913 2763 1.695 - - 0.748 - - 0.947 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
53. znf865 ENSDARG00000036698 15532 1.692 - - - - 0.934 - 0.758 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
54. ppp4r2a ENSDARG00000026540 1782 1.687 - - - - - 0.833 0.854 - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
55. exoc3l4 ENSDARG00000058180 923 1.684 - - - - 0.955 0.729 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
56. ncana 1537 1.684 - 0.822 - - - 0.862 - - - neurocan a
57. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.678 - - 0.704 - 0.974 - - - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
58. sin3b ENSDARG00000062472 2025 1.677 - 0.714 - - 0.963 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
59. nefma ENSDARG00000021351 790 1.675 - - - - 0.949 0.726 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
60. gatad2ab ENSDARG00000006192 2461 1.674 - - 0.714 - 0.960 - - - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
61. med13b ENSDARG00000003910 1143 1.672 - - - - 0.951 0.721 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
62. C24H17orf96 C24H17orf96 1538 1.672 - 0.704 - - 0.968 - - - -
63. cd99l2 ENSDARG00000056722 5036 1.671 - - - - - 0.871 0.800 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
64. lin54 ENSDARG00000063194 2583 1.669 - - - - 0.960 - - 0.709 - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
65. CABZ01072954.1 CABZ01072954.1 2330 1.665 - - - - - 0.910 0.755 - -
66. hoxb7a ENSDARG00000056030 1212 1.661 - - - - - 0.950 0.711 - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
67. h2afx ENSDARG00000029406 2116 1.657 - - - - 0.946 - - 0.711 - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
68. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.657 - - - - 0.909 0.748 - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
69. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.657 - - 0.768 - - 0.889 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
70. BX005008.2 BX005008.2 708 1.655 - - - - 0.951 - - - 0.704
71. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.654 - - - - 0.932 0.722 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
72. akap6 ENSDARG00000077295 1382 1.652 - 0.722 - - - 0.930 - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
73. hey2 ENSDARG00000013441 540 1.651 - - - - 0.945 - - 0.706 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
74. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.651 - 0.701 - - 0.950 - - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
75. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.643 - - - - - 0.824 - 0.819 - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
76. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.642 - - - 0.710 - 0.932 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
77. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.64 - - - - - 0.879 0.761 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
78. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.639 - 0.773 - - - 0.866 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
79. DACT3_1 DACT3_1 1235 1.639 - 0.711 - - - 0.928 - - -
80. ttyh2 ENSDARG00000016934 1868 1.638 - - - - 0.879 0.759 - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
81. kera ENSDARG00000056938 2434 1.637 - 0.710 - - 0.927 - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
82. ksr2 ENSDARG00000094526 134 1.634 - - - - - 0.932 0.702 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
83. nrn1a ENSDARG00000071860 1311 1.632 - 0.769 - - - 0.863 - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
84. nin ENSDARG00000060298 1558 1.631 - - - - - 0.922 - - 0.709 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
85. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.627 - - - - 0.904 - - - 0.723 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
86. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 1.624 - - - - - 0.867 0.757 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
87. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.622 - - 0.710 - - 0.912 - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
88. pno1 ENSDARG00000008502 4547 1.621 - 0.718 - - 0.903 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
89. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.62 - - - - 0.883 - - - 0.737 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
90. ek1 ENSDARG00000020080 742 1.616 - 0.708 - - - 0.908 - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
91. ctbp2 ctbp2 3255 1.613 - - - - - 0.866 0.747 - -
92. sumo3a ENSDARG00000028119 13447 1.612 - - - 0.813 - 0.799 - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
93. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 1.609 - - - - - 0.800 0.809 - - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
94. msi1 ENSDARG00000010710 2634 1.608 - - 0.722 - 0.886 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
95. si:ch1073-357b18.4 ENSDARG00000096602 121 1.607 - 0.754 - - - 0.853 - - - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
96. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.606 - 0.763 - - - 0.843 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
97. asphd2 ENSDARG00000059629 1005 1.602 - 0.735 - - - 0.867 - - - aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
98. CT990561.1 ENSDARG00000058284 566 1.602 - - - - - 0.879 - 0.723 - EPH receptor A5 [Source:NCBI gene;Acc:797595]
99. CT030046.1 CT030046.1 190 1.602 - - - - - 0.899 0.703 - -
100. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.599 - - - - 0.876 - 0.723 - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]

There are 2415 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA