Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srp9

Gene Name Gene ID Reads Annotation
srp9 ENSDARG00000042851 3254 signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]










Genes with expression patterns similar to srp9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srp9 ENSDARG00000042851 3254 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
2. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.442 - - 0.848 - - 0.829 - 0.765 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
3. ZNF576 ZNF576 1447 2.352 - 0.727 0.898 - - - - 0.727 -
4. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.292 - - 0.828 - - 0.706 - 0.758 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
5. gak ENSDARG00000090654 695 1.749 - - 0.884 - - 0.865 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
6. atoh1b ENSDARG00000099564 494 1.717 - - 0.869 - - 0.848 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
7. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 1.712 - 0.755 - - - 0.957 - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
8. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.704 - - 0.901 - - 0.803 - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
9. vta1 ENSDARG00000013732 6072 1.69 - - 0.893 - - - 0.797 - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
10. MSL1_1 MSL1_1 2365 1.68 - 0.886 - - - 0.794 - - -
11. prep ENSDARG00000057151 3016 1.679 - - 0.899 - - 0.780 - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
12. rnf183 ENSDARG00000068851 2427 1.678 - - 0.896 - - - 0.782 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
13. nin ENSDARG00000060298 1558 1.674 - - 0.876 - - 0.798 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
14. emc3 ENSDARG00000020607 3406 1.67 - - 0.893 - - - 0.777 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
15. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.669 - 0.768 0.901 - - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
16. nckipsd ENSDARG00000079475 777 1.663 - 0.775 0.888 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
17. ercc2 ENSDARG00000021985 678 1.655 - - 0.889 - - 0.766 - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
18. sf3a3 ENSDARG00000100114 4511 1.655 - - 0.883 - - - - 0.772 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
19. CU862021.1 CU862021.1 5925 1.651 - 0.850 - - - - 0.801 - -
20. ssbp3b ENSDARG00000030155 7163 1.645 - - 0.837 - - 0.808 - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
21. ube2g2 ENSDARG00000025404 1774 1.639 - - 0.891 - - - 0.748 - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
22. tmed4 ENSDARG00000024954 3476 1.635 - - 0.914 - - - - 0.721 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
23. HOMER2 ENSDARG00000059349 2264 1.632 - 0.873 - - - - 0.759 - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
24. lrrc8a lrrc8a 674 1.63 - - 0.895 - - - 0.735 - -
25. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.629 - - 0.891 - - - - 0.738 - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
26. WDFY3 ENSDARG00000078890 2092 1.627 - - 0.885 - - 0.742 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
27. TCAIM ENSDARG00000079881 424 1.627 - - 0.888 - - 0.739 - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
28. dsc2l ENSDARG00000039677 2747 1.625 - - 0.872 - - 0.753 - - - desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
29. ncalda ENSDARG00000070688 5069 1.623 - - 0.877 - - 0.746 - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
30. psen2 ENSDARG00000015540 832 1.617 - - 0.881 - - - - 0.736 - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
31. enc1 ENSDARG00000035398 1657 1.615 - 0.819 0.796 - - - - - - ectodermal-neural cortex 1 [Source:ZFIN;Acc:ZDB-GENE-060531-140]
32. dennd5a ENSDARG00000017006 3426 1.606 - - 0.893 - - - 0.713 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
33. si:dkey-19e4.5 ENSDARG00000089886 2562 1.605 - - 0.882 - - - - 0.723 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
34. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.604 - - 0.878 - - 0.726 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
35. CU302436.2 CU302436.2 587 1.599 - 0.729 0.870 - - - - - -
36. mapk12b ENSDARG00000006409 2246 1.597 - - 0.834 - - 0.763 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
37. nf1b ENSDARG00000004184 548 1.593 - - 0.886 - - - - 0.707 - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
38. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.592 - 0.706 0.886 - - - - - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
39. tubgcp2 ENSDARG00000013079 1520 1.589 - - 0.885 - - 0.704 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
40. bag6 ENSDARG00000075892 3782 1.585 - - 0.869 - - - 0.716 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
41. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.58 - - 0.846 - - - - 0.734 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
42. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.578 - - 0.871 - - - 0.707 - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
43. BX088524.2 ENSDARG00000103268 564 1.577 - - - - - 0.816 0.761 - -
44. anxa2a ENSDARG00000003216 10684 1.572 - 0.772 - - - - 0.800 - - annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
45. brd4 ENSDARG00000078904 5367 1.572 - - 0.856 - - - 0.716 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
46. rab25a ENSDARG00000058800 451 1.569 - - - - - 0.746 0.823 - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
47. SVIL SVIL 2589 1.567 - - 0.858 - - - - 0.709 -
48. si:dkey-22o22.2 ENSDARG00000102445 149 1.567 - - - - - 0.863 - 0.704 - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
49. dlb ENSDARG00000004232 5120 1.564 - - 0.817 - - - - 0.747 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
50. e2f7 ENSDARG00000008986 1439 1.562 - 0.820 - - - - - 0.742 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
51. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.562 - - - - - 0.825 0.737 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
52. carm1 ENSDARG00000018698 5599 1.558 - 0.706 0.852 - - - - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
53. psma6b ENSDARG00000013966 4410 1.553 0.711 - - - - - 0.842 - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
54. arhgap27 ENSDARG00000104255 439 1.553 - - - - - 0.714 0.839 - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
55. tet3 ENSDARG00000062646 6672 1.551 - - - - - 0.788 0.763 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
56. daxx ENSDARG00000000729 734 1.542 - - - - - 0.833 - 0.709 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
57. SLC9A1 ENSDARG00000067784 1494 1.541 - 0.823 - - - - 0.718 - - solute carrier family 9 member A1 [Source:HGNC Symbol;Acc:HGNC:11071]
58. asap1a ENSDARG00000029463 1566 1.541 - - - - - 0.815 - 0.726 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
59. zic5 ENSDARG00000016022 1034 1.536 - - - - - 0.725 - 0.811 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
60. pkib ENSDARG00000053110 527 1.536 - - - - - 0.832 - 0.704 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
61. ptgs2a ENSDARG00000004539 1207 1.53 - - - - - 0.753 0.777 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
62. fam49ba ENSDARG00000020929 1980 1.529 - - 0.815 - - - 0.714 - - family with sequence similarity 49, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9537]
63. nos2b ENSDARG00000031976 935 1.525 - - - - - 0.802 0.723 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
64. ruvbl1 ENSDARG00000002591 2381 1.521 - - - - - 0.717 0.804 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
65. tmem8a ENSDARG00000032795 677 1.52 - - - - - 0.761 0.759 - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
66. rfx2 ENSDARG00000013575 1275 1.519 - - - - - 0.730 - 0.789 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
67. ergic3 ENSDARG00000038074 1773 1.517 - 0.803 - - - - 0.714 - - ERGIC and golgi 3 [Source:ZFIN;Acc:ZDB-GENE-040426-795]
68. AL929115.2 AL929115.2 952 1.512 - - - - - 0.787 - 0.725 -
69. GPR116_2 GPR116_2 380 1.509 - - - - - 0.736 0.773 - -
70. cldn5a ENSDARG00000043716 3865 1.509 - - 0.764 - - - - 0.745 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
71. arhgef2 ENSDARG00000075819 2173 1.508 - 0.778 - - - 0.730 - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
72. fam53b ENSDARG00000016156 2143 1.501 - - - - - 0.714 0.787 - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
73. gle1 ENSDARG00000043559 1362 1.498 - - - - - 0.716 0.782 - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
74. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.495 - - - - - 0.748 0.747 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
75. dpp3 ENSDARG00000020676 2393 1.487 - 0.785 - - - 0.702 - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
76. zcchc10 ENSDARG00000091092 1333 1.485 - - - - - 0.736 - 0.749 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
77. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.482 - - - - - 0.706 0.776 - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
78. ebag9 ENSDARG00000040021 2217 1.479 - - - - - 0.717 0.762 - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
79. utp3 ENSDARG00000056720 922 1.477 - - - - - 0.715 - 0.762 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
80. scocb ENSDARG00000002217 1844 1.476 - 0.750 - - - 0.726 - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
81. ireb2 ENSDARG00000021466 699 1.475 - - - - - 0.737 - 0.738 - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
82. si:dkey-95p16.2 ENSDARG00000093484 3413 1.473 - 0.704 - - - - 0.769 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
83. nedd4l ENSDARG00000060006 1669 1.473 - - - - - 0.712 0.761 - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
84. tpbga ENSDARG00000099609 1051 1.466 - 0.731 - - - - 0.735 - - trophoblast glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-030827-4]
85. notch1b ENSDARG00000052094 7874 1.464 - - - - - 0.763 - 0.701 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
86. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.458 - 0.757 - - - - 0.701 - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
87. eef2a.1 ENSDARG00000042094 1781 1.458 - 0.706 - - - - - 0.752 - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
88. rfx1b ENSDARG00000075904 1175 1.453 - 0.723 - - - - 0.730 - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
89. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.451 - - 0.745 - - 0.706 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
90. stap2a ENSDARG00000092810 591 1.447 - - - - - 0.726 - 0.721 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
91. TMEM185A TMEM185A 5505 1.445 - 0.719 - - - 0.726 - - -
92. nrxn2a ENSDARG00000061454 291 1.444 - - - - - 0.740 - 0.704 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
93. AIM1L AIM1L 899 1.444 - 0.711 - - - - 0.733 - -
94. spryd7a ENSDARG00000052624 1059 1.442 - 0.719 - - - - 0.723 - - SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
95. dnmbp ENSDARG00000074121 2711 1.439 - - - - - - 0.734 0.705 - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
96. adi1 ENSDARG00000020448 1402 1.438 - 0.718 - - - - - 0.720 - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
97. anln ENSDARG00000060917 1432 1.435 - 0.708 - - - - - 0.727 - anillin, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4486]
98. sh3bgrl2 ENSDARG00000036878 282 1.43 - - - - - 0.707 - 0.723 - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
99. idh3g ENSDARG00000023648 4877 1.424 - - - - - 0.710 - 0.714 - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
100. arhgap11a ENSDARG00000100019 1642 1.423 - - - - - 0.708 0.715 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]

There are 1742 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA