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Results for srp54

Gene Name Gene ID Reads Annotation
srp54 ENSDARG00000098367 2301 signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818]










Genes with expression patterns similar to srp54

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srp54 ENSDARG00000098367 2301 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818]
2. MAP4_1 MAP4_1 1153 2.639 - 0.953 0.970 - - 0.716 - - -
3. atpif1b 8625 2.203 - 0.729 0.756 - - - 0.718 - - ATPase inhibitory factor 1b
4. anapc10 ENSDARG00000090152 1406 1.908 - 0.953 0.955 - - - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
5. arid4a ENSDARG00000043873 4176 1.899 - 0.949 0.950 - - - - - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
6. ktn1 ENSDARG00000032802 6251 1.88 - 0.974 0.906 - - - - - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
7. lsm4 ENSDARG00000023852 6083 1.759 - 0.884 0.875 - - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
8. sypl2b ENSDARG00000000690 2006 1.754 - 0.963 - - - 0.791 - - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
9. C2H1orf123 C2H1orf123 2344 1.743 - 0.957 - 0.786 - - - - -
10. mrps33 ENSDARG00000020015 3551 1.732 - - 0.946 - - - 0.786 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
11. zgc:110425 ENSDARG00000058479 5216 1.728 - 0.907 0.821 - - - - - - zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
12. bcr ENSDARG00000079286 578 1.704 - 0.951 - 0.753 - - - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
13. skia ENSDARG00000042151 1850 1.703 - 0.964 - 0.739 - - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
14. csnk1da ENSDARG00000008370 3469 1.701 - 0.940 - - - 0.761 - - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
15. SH3GLB1 SH3GLB1 2274 1.693 - - 0.951 - - - 0.742 - -
16. dctn3 ENSDARG00000041363 3351 1.684 - - 0.972 - - - 0.712 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
17. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.68 - 0.958 - 0.722 - - - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
18. znf346 ENSDARG00000060695 3942 1.676 - 0.904 - - - - 0.772 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
19. ZBTB7B ENSDARG00000021891 843 1.67 - 0.937 - 0.733 - - - - - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
20. mtmr7b ENSDARG00000070412, ENSDARG00000112046 724 1.665 - 0.960 - 0.705 - - - - - myotubularin related protein 7b [Source:ZFIN;Acc:ZDB-GENE-050913-66]
21. mxd3 ENSDARG00000098350 3040 1.663 - 0.930 - - - - 0.733 - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
22. cactin ENSDARG00000059866 553 1.659 - 0.952 - 0.707 - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
23. Sep-02 Sep-02 10074 1.642 - 0.858 - - - - 0.784 - -
24. ltv1 ENSDARG00000008490 2403 1.638 - 0.913 - - - - 0.725 - - LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
25. srsf11 ENSDARG00000098574 12801 1.629 - 0.875 0.754 - - - - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
26. cox6c ENSDARG00000038577 16845 1.627 - - 0.874 - - - 0.753 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
27. atp6v1d ENSDARG00000011175 8331 1.622 - 0.915 - 0.707 - - - - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
28. glrx3 ENSDARG00000098785 4138 1.609 - - 0.883 - - - 0.726 - - glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
29. mycb ENSDARG00000007241 3988 1.596 - 0.829 - - - 0.767 - - - MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
30. cnppd1 ENSDARG00000027078 3778 1.593 - - 0.891 - - - 0.702 - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
31. rhoaa ENSDARG00000026845 6900 1.593 - 0.875 - - - 0.718 - - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
32. nsa2 ENSDARG00000007708 6329 1.586 - - 0.879 - - 0.707 - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
33. denr ENSDARG00000037229 8370 1.555 - - 0.789 - - - 0.766 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
34. ube2v2 ENSDARG00000028198 23341 1.463 - 0.742 - - - - 0.721 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
35. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.454 - - - - - 0.700 0.754 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
36. caprin1b ENSDARG00000054272 7033 1.447 - 0.742 - - - - 0.705 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
37. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.434 - - - 0.724 - - 0.710 - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
38. galnt1 ENSDARG00000061335 1648 0.98 - - 0.980 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
39. uqcc uqcc 4742 0.975 - 0.975 - - - - - - -
40. FBXW7 ENSDARG00000060994 1675 0.975 - - 0.975 - - - - - - F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
41. PTDSS2 ENSDARG00000101018 881 0.974 - - 0.974 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
42. C2CD2 ENSDARG00000105000 2573 0.973 - - 0.973 - - - - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
43. gnb1a ENSDARG00000090454 481 0.973 - - 0.973 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
44. mbtps2 ENSDARG00000057577 1285 0.972 - - 0.972 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
45. tmco4 ENSDARG00000078924 330 0.972 - - 0.972 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
46. ralba ENSDARG00000040778 1574 0.971 - - 0.971 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
47. hint3 ENSDARG00000074286 1015 0.971 - - 0.971 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
48. hipk3b ENSDARG00000062082 1248 0.971 - - 0.971 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
49. angptl2b ENSDARG00000068369 1705 0.971 - - 0.971 - - - - - - angiopoietin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050624-1]
50. TIFA TIFA 1519 0.971 - - 0.971 - - - - - -
51. apip ENSDARG00000003132 1212 0.97 - - 0.970 - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
52. si:ch211-250c4.3 si:ch211-250c4.3 677 0.97 - - 0.970 - - - - - -
53. sptlc3 ENSDARG00000030743 596 0.969 - - 0.969 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
54. pvrl2l ENSDARG00000063390 1112 0.969 - - 0.969 - - - - - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
55. FP236812.4 FP236812.4 1244 0.969 - - 0.969 - - - - - -
56. ZNHIT6 ENSDARG00000095817 355 0.969 - - 0.969 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
57. GIT1 ENSDARG00000039489 1157 0.969 - - 0.969 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
58. si:ch211-173m16.2 ENSDARG00000093284 186 0.969 - - 0.969 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
59. prdm1a ENSDARG00000002445 1340 0.969 - - 0.969 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
60. CR382281.1 ENSDARG00000100098 135 0.968 - - 0.968 - - - - - -
61. c1ql3a ENSDARG00000010350 179 0.968 - - 0.968 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
62. si:dkey-54g2.6 si:dkey-54g2.6 252 0.968 - - 0.968 - - - - - -
63. wnt10a ENSDARG00000017155 491 0.968 - - 0.968 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
64. si:dkey-220k22.3 ENSDARG00000094693 166 0.968 - - 0.968 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
65. mxra8b ENSDARG00000062129 1004 0.968 - - 0.968 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
66. dnajc3 dnajc3 802 0.968 - - 0.968 - - - - - -
67. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.968 - - 0.968 - - - - - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
68. tbc1d10a tbc1d10a 462 0.968 - - 0.968 - - - - - -
69. si:dkey-92i15.4 ENSDARG00000078387 428 0.968 - - 0.968 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
70. CR855996.2 ENSDARG00000104450 310 0.968 - - 0.968 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
71. ercc5 ENSDARG00000023678 468 0.968 - - 0.968 - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
72. ppp1r14c ENSDARG00000077341 1587 0.968 - - 0.968 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
73. ndufa4l2 153 0.968 - - 0.968 - - - - - - NDUFA4, mitochondrial complex associated like 2
74. sema3fb ENSDARG00000055373 834 0.967 - - 0.967 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
75. sf3a2 ENSDARG00000021107 2929 0.967 - - 0.967 - - - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
76. npdc1 npdc1 221 0.967 - - 0.967 - - - - - -
77. ik ENSDARG00000004161 3132 0.967 - 0.967 - - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
78. mark2a ENSDARG00000079905 1765 0.967 - - 0.967 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
79. EMG1 ENSDARG00000056914 1343 0.967 - - 0.967 - - - - - - EMG1 N1-specific pseudouridine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060421-2909]
80. dnajc10 ENSDARG00000074727 1523 0.967 - - 0.967 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
81. CABZ01008011.1 CABZ01008011.1 761 0.967 - - 0.967 - - - - - -
82. lrp5 ENSDARG00000006921 3522 0.966 - 0.966 - - - - - - - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
83. abat ENSDARG00000006031 2143 0.966 - 0.966 - - - - - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
84. stk38a ENSDARG00000019973 1343 0.966 - - 0.966 - - - - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
85. gnptab ENSDARG00000030153 559 0.966 - 0.966 - - - - - - - N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [Source:ZFIN;Acc:ZDB-GENE-030131-4714]
86. smpd1 ENSDARG00000076121 584 0.966 - - 0.966 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
87. edc3 ENSDARG00000051931 780 0.966 - - 0.966 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
88. tjp3 ENSDARG00000002909 1978 0.966 - 0.966 - - - - - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
89. slc2a10 ENSDARG00000090820 637 0.966 - - 0.966 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
90. itsn1 ENSDARG00000000086 684 0.965 - - 0.965 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
91. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.965 - - 0.965 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
92. SYS1 ENSDARG00000017606 1369 0.965 - 0.965 - - - - - - - Sys1 golgi trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-8283]
93. nfe2l2a ENSDARG00000042824 1707 0.965 - 0.965 - - - - - - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
94. BTBD2 BTBD2 610 0.964 - 0.964 - - - - - - -
95. ehd1a ENSDARG00000098853 1092 0.964 - - 0.964 - - - - - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
96. bcl2l10 ENSDARG00000026766 1426 0.964 - - 0.964 - - - - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
97. esyt2a ENSDARG00000030824 1907 0.964 - - 0.964 - - - - - - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
98. emd ENSDARG00000095774, ENSDARG00000114017 1640 0.964 - 0.964 - - - - - - - emerin (Emery-Dreifuss muscular dystrophy) [Source:ZFIN;Acc:ZDB-GENE-070501-2]
99. si:dkey-239h2.3 ENSDARG00000092033 398 0.963 - 0.963 - - - - - - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
100. il17rd ENSDARG00000098359 1153 0.963 - - 0.963 - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]

There are 879 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA