Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srl

Gene Name Gene ID Reads Annotation
srl ENSDARG00000104587 11126 sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]










Genes with expression patterns similar to srl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srl ENSDARG00000104587 11126 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
2. prx ENSDARG00000017246 6183 6.788 0.845 0.866 0.846 0.786 0.705 0.995 0.976 0.769 - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
3. mybpc2b ENSDARG00000021265 9618 5.971 0.862 0.912 0.882 0.747 - 0.864 0.910 0.794 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
4. CR847973.1 ENSDARG00000115516 8754 5.847 0.939 0.831 0.737 0.829 0.753 - 0.941 0.817 -
5. eef2l2 ENSDARG00000035256 6815 5.668 0.826 0.846 0.755 0.797 - 0.966 0.765 - 0.713 eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
6. TMPO TMPO 3264 5.268 0.829 0.907 0.774 - - 0.992 0.953 - 0.813
7. si:ch211-114n24.7 si:ch211-114n24.7 2544 5.232 0.826 0.941 0.740 0.814 - 0.979 0.932 - -
8. casq2 ENSDARG00000008982 21802 5.134 0.920 - 0.840 0.869 0.815 - - 0.783 0.907 calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
9. si:ch211-156j16.1 ENSDARG00000092035 7441 5.113 0.867 - 0.726 0.870 0.713 0.984 0.953 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
10. SPEG SPEG 4017 5.093 0.816 - 0.744 0.817 0.762 0.986 0.968 - -
11. hhatla ENSDARG00000039051 6598 5.05 0.876 0.904 0.755 0.791 - - 0.956 0.768 - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
12. pbxip1a ENSDARG00000071015 4960 5.034 0.851 0.923 0.799 0.781 0.747 - 0.933 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
13. atp2a1 ENSDARG00000020574 291561 5.033 0.879 - 0.856 0.846 0.797 - 0.798 0.857 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. tnnt2d ENSDARG00000002988 7590 5.013 0.831 0.833 0.785 0.781 - - 0.964 0.819 - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
15. tpma ENSDARG00000033683 752432 4.99 0.864 - 0.857 0.870 0.775 - 0.830 0.794 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
16. EHBP1L1 EHBP1L1 2500 4.981 0.866 0.878 0.839 0.728 - - 0.950 0.720 -
17. tnnt3a ENSDARG00000030270 112506 4.872 0.866 - 0.853 0.776 0.812 - 0.792 0.773 - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
18. stac3 ENSDARG00000098883 1765 4.869 0.815 0.913 0.726 0.717 - - 0.949 0.749 - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
19. mylz3 ENSDARG00000017441 303597 4.814 0.831 - 0.866 0.805 0.777 - 0.754 0.781 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
20. jph1b ENSDARG00000038826 7416 4.74 - 0.927 0.851 0.776 0.717 - 0.755 0.714 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
21. MYOM1 MYOM1 3870 4.348 0.819 0.848 0.741 - - 0.984 0.956 - -
22. znf106a ENSDARG00000016651 6049 4.31 0.840 0.877 - 0.852 0.787 - 0.954 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
23. pvalb4 ENSDARG00000024433 35736 4.305 0.894 - 0.772 0.843 - 0.823 0.973 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
24. xirp2a ENSDARG00000071113 7113 4.296 0.912 0.916 - 0.703 0.816 - 0.949 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
25. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 4.292 0.949 - 0.838 0.878 0.774 0.853 - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
26. txlnbb ENSDARG00000076241 6396 4.258 0.842 0.957 - - 0.729 - 0.915 0.815 - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
27. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.25 0.792 0.924 - 0.793 - - 0.947 0.794 - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
28. sgcd ENSDARG00000098573 4980 4.246 0.820 - 0.788 - 0.703 0.990 0.945 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
29. tmem38a ENSDARG00000024047 41883 4.239 0.840 - 0.823 0.871 0.855 - - 0.850 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
30. actn3b ENSDARG00000001431 15747 4.238 0.913 0.949 0.751 0.856 0.769 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
31. BX294434.1 ENSDARG00000061272 6493 4.235 0.850 0.929 0.743 - - - 0.969 0.744 - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
32. NRAP ENSDARG00000009341 3565 4.212 0.843 0.895 0.766 0.751 - - 0.957 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
33. rtn2a ENSDARG00000016088 12184 4.201 0.899 - 0.781 0.818 0.718 - 0.985 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
34. cfl2 ENSDARG00000014106 8051 4.188 0.796 0.945 0.784 0.825 - - 0.838 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
35. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 4.181 0.842 - 0.764 0.824 - - 0.970 0.781 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
36. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 4.177 0.739 - 0.870 - 0.787 - 0.972 0.809 - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
37. chrna1 ENSDARG00000009021 2931 4.175 0.866 0.892 0.729 - - - 0.931 0.757 - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
38. klhl31 ENSDARG00000039066 13656 4.161 - - 0.839 0.819 0.818 - 0.817 0.868 - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
39. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 4.151 0.864 0.953 0.716 0.713 - - 0.905 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
40. ryr1b ENSDARG00000023797 5693 4.15 - 0.952 0.774 0.728 - - 0.976 0.720 - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
41. mdh1b ENSDARG00000018008 3196 4.137 0.909 0.772 0.794 0.706 - - 0.956 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
42. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 4.137 0.838 - 0.836 0.758 - - 0.933 0.772 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
43. ckmb ENSDARG00000040565 505935 4.134 0.791 - 0.887 0.845 0.796 - - 0.815 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
44. pgam2 ENSDARG00000057571 23387 4.126 0.833 - - 0.886 0.731 0.884 - 0.792 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
45. PTPLA PTPLA 4044 4.101 0.813 0.912 - 0.727 - - 0.934 0.715 -
46. CR354540.2 ENSDARG00000117517 18452 4.098 0.856 - 0.828 0.752 - - 0.932 0.730 -
47. zgc:92518 ENSDARG00000016343 3837 4.077 0.876 - 0.727 0.754 0.761 - 0.959 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
48. tnni2a.4 ENSDARG00000029069 122344 4.074 0.898 - 0.814 0.736 0.787 - - 0.839 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
49. acta1b ENSDARG00000055618 195597 4.07 0.860 - 0.851 - 0.761 - 0.773 0.825 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
50. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.054 0.827 0.790 0.735 0.736 - - 0.966 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
51. actc1b ENSDARG00000099197 324665 4.05 0.802 - 0.763 0.782 0.832 - - 0.871 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
52. cap2 ENSDARG00000104478 3266 4.046 0.824 0.812 - 0.779 - - 0.925 0.706 - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
53. mylpfb ENSDARG00000002589 70167 4.018 - 0.931 0.824 0.804 - - 0.702 0.757 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
54. adss ENSDARG00000002071 5497 4.015 0.813 - 0.763 - 0.735 - 0.956 0.748 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
55. casq1b ENSDARG00000018105 2643 4.011 0.801 0.803 0.737 0.709 - - 0.961 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
56. gapdh ENSDARG00000043457 68684 4.009 0.805 - 0.743 0.891 0.812 - - 0.758 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
57. MUSTN1 MUSTN1 1882 4.006 0.763 0.874 0.702 - 0.707 - 0.960 - -
58. desma ENSDARG00000058656 30292 3.992 0.860 - 0.793 0.880 0.748 - - 0.711 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
59. myhz1.3 ENSDARG00000067997 155509 3.968 0.881 - 0.815 0.797 0.738 - - 0.737 - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
60. myl1 ENSDARG00000014196 98943 3.954 0.747 - 0.879 0.705 0.849 - - 0.774 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
61. tmem161a ENSDARG00000012790 16094 3.93 0.879 - 0.723 0.840 0.744 - 0.744 - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
62. sncga ENSDARG00000034423, ENSDARG00000112260 5469 3.706 - 0.729 - 0.735 0.778 - 0.733 0.731 - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
63. hapln1a ENSDARG00000089769 12334 3.643 0.856 0.903 - - - 0.977 0.907 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
64. pygma ENSDARG00000055518 15972 3.562 0.924 0.928 - - - - 0.944 0.766 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
65. trdn ENSDARG00000041779 4283 3.558 0.876 0.941 0.781 - - - 0.960 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
66. sptb ENSDARG00000030490 7128 3.539 0.848 0.942 0.768 - - - 0.981 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
67. C13H10orf71 3489 3.527 0.856 0.945 0.756 - - - 0.970 - - chromosome 13 C10orf71 homolog
68. nmrk2 ENSDARG00000067848 10293 3.464 - 0.933 - - 0.700 - 0.984 0.847 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
69. jph2 ENSDARG00000028625 6706 3.459 0.856 - - 0.796 - - 0.951 0.856 - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
70. murcb murcb 13655 3.456 0.898 - - 0.863 - - 0.966 0.729 -
71. klhl40a ENSDARG00000039052 2537 3.439 0.870 0.926 - 0.712 - - 0.931 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
72. ntmt1 ENSDARG00000022399 5779 3.411 0.810 0.945 - - 0.762 - 0.894 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
73. cacng1 cacng1 3118 3.409 0.875 0.949 - - 0.711 - 0.874 - -
74. tgm2a ENSDARG00000070157 4516 3.397 0.898 - 0.820 0.721 - - 0.958 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
75. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.386 0.886 0.929 - 0.777 - - - 0.794 - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
76. smyd2b ENSDARG00000005629 8181 3.381 0.868 0.931 - - 0.819 - - 0.763 - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
77. fitm1 ENSDARG00000056464 1759 3.375 0.825 0.923 0.714 - - - 0.913 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
78. zgc:158296 ENSDARG00000070923 3935 3.368 - 0.876 0.769 0.785 - - 0.938 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
79. nexn ENSDARG00000057317 10972 3.366 0.898 - 0.712 0.775 - - 0.981 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
80. ryr3 ENSDARG00000071331 6795 3.366 0.786 0.916 0.720 - - - 0.944 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
81. alpk3a ENSDARG00000078989 1992 3.364 0.759 0.963 - - 0.757 - 0.885 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
82. asb5b ENSDARG00000053222 1207 3.361 0.863 0.896 - 0.720 - - 0.882 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
83. ttna ttna 101197 3.344 0.828 - 0.848 - 0.837 - - 0.831 -
84. chrnd ENSDARG00000019342 2728 3.341 0.783 0.929 0.712 - - - 0.917 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
85. vcl vcl 6667 3.332 0.838 0.941 0.852 0.701 - - - - -
86. sar1ab ENSDARG00000033320 3984 3.329 0.791 - 0.813 0.780 - - 0.945 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
87. tnnc1b ENSDARG00000037539 13945 3.327 - 0.943 - 0.701 0.718 - 0.965 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
88. COL22A1 COL22A1 4473 3.327 0.807 0.860 0.718 - - - 0.942 - -
89. tmem182 tmem182 12589 3.325 - - 0.716 0.796 - - 0.980 0.833 -
90. SYNPO2L SYNPO2L 6697 3.32 0.890 - 0.879 0.777 - - - 0.774 -
91. tnnt3b ENSDARG00000068457 101827 3.315 - 0.909 0.826 0.779 - - - 0.801 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
92. jph1a ENSDARG00000058603 2852 3.309 - 0.943 - 0.719 - - 0.939 0.708 - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
93. trim55a ENSDARG00000029596 2858 3.297 0.787 0.919 - 0.704 - - 0.887 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
94. rp42-pen rp42-pen 3395 3.292 - 0.929 - 0.717 0.715 - 0.931 - -
95. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 3.29 0.855 - 0.845 - 0.782 - - 0.808 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
96. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.284 0.831 - 0.835 0.811 - - - 0.807 - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
97. ttnb ttnb 73721 3.279 - - 0.830 0.883 0.812 - - 0.754 -
98. txlnba ENSDARG00000020594 9385 3.256 - - 0.708 0.795 - 0.781 0.972 - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
99. aldoab ENSDARG00000034470 88942 3.248 0.868 - - 0.820 0.799 - 0.761 - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
100. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.246 0.875 - 0.789 0.880 0.702 - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]

There are 1695 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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