Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srgap1

Gene Name Gene ID Reads Annotation
srgap1 srgap1 2320










Genes with expression patterns similar to srgap1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srgap1 srgap1 2320 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. marcksa ENSDARG00000004049 2518 2.571 - - 0.864 - 0.926 0.781 - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
3. supt6h ENSDARG00000006524 3221 2.541 - - 0.841 - 0.966 - 0.734 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
4. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.514 - - 0.781 - 0.974 0.759 - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
5. sulf2 sulf2 1286 2.505 - - - - 0.981 0.770 0.754 - -
6. brd3b ENSDARG00000100129 6387 2.458 - - - - 0.884 0.788 0.786 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
7. ralgps2 ENSDARG00000026519 1610 2.287 0.785 - 0.789 - - - 0.713 - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
8. kdm1a ENSDARG00000060679 6152 2.269 - - - 0.701 0.844 - 0.724 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
9. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.214 0.719 - - - - 0.715 0.780 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
10. CR548630.1 CR548630.1 3301 1.781 - - - - 0.973 0.808 - - -
11. txlna ENSDARG00000077037 2614 1.766 - - - - 0.971 - 0.795 - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
12. spcs2 ENSDARG00000042823 10032 1.743 - - - - 0.965 - 0.778 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
13. tmem50a ENSDARG00000015757 3244 1.733 - - - - 0.963 - 0.770 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
14. sin3b ENSDARG00000062472 2025 1.731 - - - - 0.983 - 0.748 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
15. nckap1 ENSDARG00000060853 3540 1.73 - - - - 0.957 - 0.773 - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
16. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 1.722 - - - - 0.970 - 0.752 - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
17. UBE2QL1 ENSDARG00000079276 3474 1.721 - - - - 0.967 0.754 - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
18. brd9 ENSDARG00000017143 936 1.718 - 0.743 - - 0.975 - - - - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
19. gins2 ENSDARG00000002304 1187 1.707 - - - - 0.958 - 0.749 - - GINS complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050419-19]
20. FP245444.1 FP245444.1 1922 1.705 - - - - 0.977 0.728 - - -
21. apc ENSDARG00000058868 2605 1.702 - - - - 0.959 0.743 - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
22. kif22 ENSDARG00000102624 3694 1.697 - - - - 0.956 - 0.741 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
23. cnep1r1 ENSDARG00000036064 1440 1.697 - - 0.728 - 0.969 - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
24. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.697 - - - - 0.875 - 0.822 - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
25. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.693 - - 0.891 - - 0.802 - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
26. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.688 - - - - 0.963 - 0.725 - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
27. zgc:113442 ENSDARG00000101906 3092 1.687 - - - - 0.948 - 0.739 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
28. hccs hccs 1758 1.683 - - 0.714 - 0.969 - - - -
29. hexim1 ENSDARG00000036482 4317 1.681 - - - - 0.927 - 0.754 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
30. zgc:123105 ENSDARG00000003127 3061 1.679 - - - - 0.958 0.721 - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
31. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.677 - - - - 0.969 0.708 - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
32. pygo2 ENSDARG00000036772 2510 1.676 - - - - 0.903 0.773 - - - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
33. axin2 ENSDARG00000100149 4223 1.669 - - - - 0.917 - 0.752 - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
34. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.665 - - - - 0.866 - 0.799 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
35. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.658 - - - - 0.957 - 0.701 - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
36. carm1 ENSDARG00000018698 5599 1.654 - - - - - 0.839 0.815 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
37. cenpf ENSDARG00000055133 5267 1.649 - 0.709 - - 0.940 - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
38. smarca4 smarca4 9726 1.634 - - - - - 0.774 0.860 - -
39. h2afva ENSDARG00000068820 16427 1.627 - - - - - 0.852 0.775 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
40. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.615 - - 0.852 - - - 0.763 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
41. ssu72 ENSDARG00000031216 2350 1.614 - - 0.814 - - - 0.800 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
42. axin1 ENSDARG00000102964 1710 1.608 - - 0.859 - - - 0.749 - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
43. msi1 ENSDARG00000010710 2634 1.606 - - - - 0.890 0.716 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
44. PTGFRN_1 ENSDARG00000075505 1447 1.605 - - - - 0.899 - 0.706 - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
45. prkar1aa ENSDARG00000076128 6565 1.59 - - 0.796 - - - 0.794 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
46. cdk2ap2 ENSDARG00000103145 8024 1.588 - - - - 0.832 - 0.756 - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
47. gdi1 ENSDARG00000056122 4106 1.585 - - - - - 0.780 0.805 - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
48. trrap ENSDARG00000100623 3429 1.584 - - 0.816 - - - 0.768 - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
49. golph3 ENSDARG00000052851, ENSDARG00000109334 2114 1.581 - - 0.832 - - - 0.749 - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
50. map3k7 ENSDARG00000020469 2845 1.576 - - 0.836 - - - 0.740 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
51. smarcb1b ENSDARG00000011594 2413 1.574 - - - - - 0.822 0.752 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
52. smarca5 ENSDARG00000052348 15433 1.573 - - - - - 0.815 0.758 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
53. TNRC6B ENSDARG00000074161 2464 1.573 0.738 - 0.835 - - - - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
54. rerea ENSDARG00000077353 4162 1.57 - - 0.841 - - - 0.729 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
55. calm1a ENSDARG00000021811 4791 1.568 - - - - 0.864 0.704 - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
56. IWS1 2428 1.567 - - 0.825 - - - 0.742 - - IWS1, SUPT6H interacting protein, transcript variant X2
57. srsf4 ENSDARG00000105293 9657 1.566 - - - - - 0.835 0.731 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
58. srsf3b ENSDARG00000059360 14888 1.563 - - - - 0.822 0.741 - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
59. acin1b ENSDARG00000026842 3806 1.562 - - 0.817 - - - 0.745 - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
60. rbm8a ENSDARG00000016516 8789 1.557 - - - - 0.757 - 0.800 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
61. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.554 - - - - - 0.769 0.785 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
62. suv39h1b ENSDARG00000055753 1540 1.552 - - 0.843 - - - 0.709 - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
63. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.548 - - 0.749 - - - 0.799 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
64. whsc1l1 8544 1.548 - - - - - 0.789 0.759 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
65. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.546 - - - - - 0.790 0.756 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
66. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.545 - - 0.815 - - - 0.730 - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
67. kifc1 ENSDARG00000001558 6658 1.545 - - - - - 0.798 0.747 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
68. rbb4 rbb4 15541 1.542 - - - - - 0.807 0.735 - -
69. pcdh19 ENSDARG00000034344 2378 1.541 0.703 - - - - 0.838 - - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
70. ube2e2 ENSDARG00000034670 5918 1.541 - - - - 0.812 - 0.729 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
71. ssbp4 ENSDARG00000056483 10196 1.537 - - - - - 0.816 0.721 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
72. tmem35 ENSDARG00000052567 5685 1.532 - - - - 0.728 0.804 - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
73. top2a ENSDARG00000024488 4273 1.53 - - 0.820 - - - 0.710 - - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
74. ptenb ENSDARG00000056623 5783 1.524 - 0.739 - - - - 0.785 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
75. seh1l ENSDARG00000004280 2915 1.523 - - 0.763 - - - 0.760 - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
76. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.521 - - 0.788 - - - 0.733 - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
77. tacc3 ENSDARG00000005454 2305 1.516 - - 0.815 - - - 0.701 - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
78. psat1 ENSDARG00000016733 8084 1.516 - - 0.735 - - - 0.781 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
79. PHLPP1 ENSDARG00000078694 2466 1.513 0.774 - - - - - 0.739 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
80. ATF6B 960 1.511 - - 0.807 - - - 0.704 - - activating transcription factor 6 beta
81. sh2d3ca ENSDARG00000028099 1037 1.508 - - - - - 0.762 0.746 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
82. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 1.506 - - 0.764 - - 0.742 - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
83. ephb3a ENSDARG00000031548 1872 1.504 - - - - 0.712 0.792 - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
84. actr1 ENSDARG00000011611 3879 1.501 - - 0.742 - - 0.759 - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
85. mllt10 ENSDARG00000045401 7557 1.501 - 0.729 - - - - 0.772 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
86. cltcb ENSDARG00000090716 5544 1.493 - - - - - 0.766 0.727 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
87. ccnt1 ENSDARG00000017525 1888 1.488 - - - - - 0.733 0.755 - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
88. mtmr14 ENSDARG00000059642 1405 1.48 0.744 0.736 - - - - - - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
89. fn1 fn1 2538 1.476 - - 0.738 - - - 0.738 - -
90. leprel2 leprel2 812 1.471 - 0.721 0.750 - - - - - -
91. chd7 ENSDARG00000075211 12085 1.468 - - - 0.710 - 0.758 - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
92. strada ENSDARG00000037929 1614 1.464 - - 0.755 - - - 0.709 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
93. vangl2 ENSDARG00000027397 2418 1.464 - - - 0.710 - - 0.754 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
94. nsd1a ENSDARG00000060016 2974 1.461 - - - - - 0.746 0.715 - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
95. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 1.457 - 0.746 0.711 - - - - - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
96. ncoa5 ENSDARG00000016345 5765 1.456 - - - - - 0.707 0.749 - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
97. setb ENSDARG00000003920 21788 1.448 - - - - - 0.741 0.707 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
98. nr2f2 ENSDARG00000040926 5213 1.435 - - - - - 0.722 0.713 - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
99. serinc5 ENSDARG00000008153 2863 1.434 - - - - 0.703 - 0.731 - - serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
100. CR848664.2 CR848664.2 876 1.416 - 0.707 - - - - 0.709 - -

There are 1353 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA