Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srfa

Gene Name Gene ID Reads Annotation
srfa ENSDARG00000053918 1773 serum response factor a [Source:ZFIN;Acc:ZDB-GENE-990714-29]










Genes with expression patterns similar to srfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srfa ENSDARG00000053918 1773 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serum response factor a [Source:ZFIN;Acc:ZDB-GENE-990714-29]
2. nol7 ENSDARG00000075795 1559 2.126 - - - - - 0.712 0.706 - 0.708 nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
3. sepw2a 8597 1.683 - - - - - 0.769 - - 0.914 selenoprotein W, 2a
4. pigu ENSDARG00000075530 348 1.619 0.798 0.821 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
5. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.587 0.870 0.717 - - - - - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
6. si:busm1-57f23.1 ENSDARG00000074425 418 1.584 - 0.803 - - - 0.781 - - - si:busm1-57f23.1 [Source:ZFIN;Acc:ZDB-GENE-030616-512]
7. arhgap5 ENSDARG00000061294 2228 1.577 - - - - - 0.759 - - 0.818 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
8. mcmbp ENSDARG00000055314 731 1.568 - 0.750 - - - - - 0.818 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
9. wdr43 ENSDARG00000077264 1992 1.548 - - - - - 0.789 0.759 - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
10. EIF2B5 ENSDARG00000074995 1277 1.54 0.804 - - - - - 0.736 - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
11. cnep1r1 ENSDARG00000036064 1440 1.527 - 0.815 - 0.712 - - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
12. ddx56 ENSDARG00000020913 1070 1.52 0.736 - - - - - - 0.784 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
13. rac1 rac1 7341 1.515 - - - - - 0.702 0.813 - -
14. AIFM2 ENSDARG00000077549 1419 1.507 - - - 0.759 - 0.748 - - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
15. mrps23 ENSDARG00000033973 2265 1.501 - 0.742 - - - - 0.759 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
16. CR383676.3 CR383676.3 2650 1.5 0.781 - - - - - 0.719 - -
17. arid1ab ENSDARG00000101891 1722 1.494 0.759 - - - - 0.735 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
18. phf3 ENSDARG00000034768 1372 1.487 0.762 - - - - 0.725 - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
19. oxct1a ENSDARG00000013063 1517 1.484 - - - - - - 0.720 0.764 - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
20. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.481 - - - - - - 0.770 - 0.711 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
21. kank2 ENSDARG00000018393 1804 1.481 - - - - - - 0.768 0.713 - KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
22. slc25a23a ENSDARG00000005690 824 1.478 - - - - - - - 0.753 0.725 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
23. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.475 - - - - - 0.753 0.722 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
24. rpgra ENSDARG00000056617 77 1.468 0.741 - - - - - - 0.727 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
25. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.466 - - - - - - - 0.712 0.754 supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
26. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 1.464 - 0.740 - 0.724 - - - - - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
27. zgc:158254 ENSDARG00000071233 265 1.463 - 0.750 - - - - - - 0.713 zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
28. gna13b ENSDARG00000037924 1963 1.46 - - - - - 0.738 - 0.722 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
29. si:dkey-100h21.2 si:dkey-100h21.2 30 1.458 - 0.735 - - - - - 0.723 -
30. tpm1 ENSDARG00000087402 1666 1.457 - 0.726 - - - - 0.731 - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
31. sppl2 ENSDARG00000030448 1040 1.414 0.709 - - - - - - - 0.705 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
32. dhrs3b ENSDARG00000044803 2931 1.409 - - - - - 0.700 - - 0.709 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
33. wu:fj05h12 wu:fj05h12 6166 0.911 - - - - - - - - 0.911
34. trim33 ENSDARG00000016181 1718 0.9 - 0.900 - - - - - - - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
35. zgc:110333 ENSDARG00000040628 3250 0.896 - - - - - - - - 0.896 zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
36. C2H1orf123 C2H1orf123 2344 0.893 - - - - - - 0.893 - -
37. pfdn4 ENSDARG00000061228 8266 0.884 - - - - - - 0.884 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
38. pdia3 ENSDARG00000102640 7239 0.874 - - - - - - - - 0.874 protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
39. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 0.867 - - - - - 0.867 - - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
40. BACH1 BACH1 1021 0.861 - 0.861 - - - - - - -
41. hipk2 ENSDARG00000042518, ENSDARG00000111166 3099 0.86 - - - - - - - - 0.860 homeodomain interacting protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031125-4]
42. CR388068.1 CR388068.1 481 0.857 - 0.857 - - - - - - -
43. chka ENSDARG00000041078, ENSDARG00000115973 468 0.851 - 0.851 - - - - - - - choline kinase alpha [Source:ZFIN;Acc:ZDB-GENE-050208-149]
44. FOCAD ENSDARG00000022020 550 0.847 - 0.847 - - - - - - - focadhesin [Source:ZFIN;Acc:ZDB-GENE-080213-1]
45. tpcn2 ENSDARG00000100420 626 0.846 - - - - - 0.846 - - - two pore segment channel 2 [Source:ZFIN;Acc:ZDB-GENE-061103-202]
46. arf1 ENSDARG00000009484 5034 0.844 - - - - - - - - 0.844 ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
47. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 0.843 - - - - - - - - 0.843 zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
48. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 0.843 - - - - - - - - 0.843 AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
49. ccdc9 ENSDARG00000004636 912 0.841 - - - - - - - - 0.841 coiled-coil domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060929-520]
50. esd ENSDARG00000019496 3192 0.839 - - - - - - 0.839 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
51. ripk4 ENSDARG00000043211 775 0.838 - - - - - - - - 0.838 receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
52. SLC12A6 SLC12A6 883 0.838 - - - - - - - - 0.838
53. stk17a ENSDARG00000074715 528 0.837 - 0.837 - - - - - - - serine/threonine kinase 17a [Source:ZFIN;Acc:ZDB-GENE-030131-5556]
54. USP24 ENSDARG00000059925 1294 0.836 - 0.836 - - - - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
55. thrab ENSDARG00000052654 315 0.836 - - - - - 0.836 - - - thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]
56. atpif1a 6030 0.835 - - - - - - 0.835 - - ATPase inhibitory factor 1a
57. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 0.834 - 0.834 - - - - - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
58. dnajc19 ENSDARG00000044420 1756 0.834 - - - - - - 0.834 - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
59. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 0.832 - - - - - - 0.832 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
60. sox7 ENSDARG00000030125 806 0.831 0.831 - - - - - - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
61. b3gnt2l ENSDARG00000068219 1875 0.831 - - - - - - - - 0.831 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
62. rgs12b ENSDARG00000036774 5088 0.831 - - - - - 0.831 - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
63. taldo1 ENSDARG00000103369 3804 0.831 - - - - - - - - 0.831 transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
64. CCAR2 ENSDARG00000038302 363 0.831 - 0.831 - - - - - - - cell cycle and apoptosis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-091204-207]
65. irf7 ENSDARG00000045661 76 0.829 - 0.829 - - - - - - - interferon regulatory factor 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1518]
66. histh1l ENSDARG00000035519 12293 0.828 - - - - - 0.828 - - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
67. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 0.828 - - - - - - - - 0.828 epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
68. eif3ha ENSDARG00000102452 9238 0.827 - - - - - - 0.827 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
69. rpz5 ENSDARG00000075718 1703 0.826 - - - - - - - - 0.826 rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
70. sps2 1522 0.824 - - - - - - - - 0.824 selenophosphate synthetase 2
71. elnb ENSDARG00000069017 744 0.823 - - - - - 0.823 - - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
72. farsb ENSDARG00000016864 6776 0.823 - - - - - - 0.823 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
73. dnajc11 1939 0.822 - - - - - - 0.822 - - DnaJ heat shock protein family (Hsp40) member C11
74. osbpl2a ENSDARG00000053804 1883 0.821 0.821 - - - - - - - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
75. rps28 ENSDARG00000035860 34765 0.821 - - - - - - 0.821 - - ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
76. chl1a ENSDARG00000077881 1488 0.821 - - - - - 0.821 - - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
77. pdcd5 ENSDARG00000026072 3135 0.821 - - - - - - 0.821 - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
78. crp4 714 0.82 - - - - - 0.820 - - - C-reactive protein 4
79. afap1l1b ENSDARG00000056453 583 0.82 0.820 - - - - - - - - actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]
80. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 0.82 - - - - - - 0.820 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
81. map3k10 ENSDARG00000055672 284 0.82 0.820 - - - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
82. cox5ab ENSDARG00000099663 5689 0.82 - - - - - - 0.820 - - cytochrome c oxidase subunit 5Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5162]
83. ARHGAP44 ENSDARG00000104549 91 0.819 - 0.819 - - - - - - - Rho GTPase activating protein 44 [Source:ZFIN;Acc:ZDB-GENE-120206-2]
84. ZFHX2 2463 0.819 - - - - - 0.819 - - - zinc finger homeobox 2, transcript variant X2
85. ubp1 ENSDARG00000018000 1047 0.819 - 0.819 - - - - - - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
86. rps8a ENSDARG00000055996 2785 0.819 - - - - - - - - 0.819 ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
87. glrx5 ENSDARG00000043665 2687 0.818 - - - - - - - - 0.818 glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
88. acsbg1 ENSDARG00000062077 2020 0.818 - - - - - - - - 0.818 acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
89. ddx42 ENSDARG00000037928 1659 0.817 - - - - - 0.817 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
90. coro2a ENSDARG00000005210 1479 0.817 - - - - - - - - 0.817 coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
91. cox6b2 ENSDARG00000037860 33134 0.816 - - - - - - 0.816 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
92. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 0.815 - - - - - - 0.815 - - ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
93. ncoa2 ENSDARG00000017929 2520 0.814 - - - - - 0.814 - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
94. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 0.814 - - - - - 0.814 - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
95. hbegfa ENSDARG00000075121 1865 0.814 - - - - - - - - 0.814 heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
96. si:ch73-131e21.5 si:ch73-131e21.5 1895 0.813 - - - - - - 0.813 - -
97. RB1CC1 ENSDARG00000076559 2771 0.813 - - - - - - - - 0.813 RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
98. hoxc13b ENSDARG00000113877 549 0.812 - 0.812 - - - - - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
99. rab11fip1a ENSDARG00000046124 69 0.811 - 0.811 - - - - - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
100. fstl1a ENSDARG00000015559 1687 0.811 - - - - - 0.811 - - - follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]

There are 1113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA