Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srek1ip1

Gene Name Gene ID Reads Annotation
srek1ip1 ENSDARG00000043728 985 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]










Genes with expression patterns similar to srek1ip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srek1ip1 ENSDARG00000043728 985 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
2. nkap ENSDARG00000033450, ENSDARG00000116152 1929 2.225 0.775 - - - - 0.726 0.724 - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
3. ik ENSDARG00000004161 3132 1.839 - - - - - 0.903 - - 0.936 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
4. ngly1 ENSDARG00000003205 733 1.826 - - - - - 0.921 - - 0.905 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
5. rbm34 ENSDARG00000101877 1573 1.807 - - - - - 0.872 - - 0.935 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
6. dhrs13a.2 ENSDARG00000111240 491 1.799 - - - - - 0.909 - - 0.890 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
7. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.798 - - - - - 0.917 - - 0.881 abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
8. pvrl1b 1645 1.785 - - - - - 0.891 - - 0.894 poliovirus receptor-related 1b
9. CEP152 ENSDARG00000075725 391 1.782 - - - - - - 0.858 - 0.924 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
10. gpr143 ENSDARG00000034572 559 1.778 - - - - - 0.851 - - 0.927 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
11. rwdd ENSDARG00000068256 964 1.773 - - - - - 0.909 - - 0.864 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
12. ankrd39 ENSDARG00000041350 73 1.768 - 0.851 - - - 0.917 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
13. nod2 ENSDARG00000010756 294 1.768 - - - - - 0.857 - - 0.911 nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
14. taz ENSDARG00000041421 985 1.752 - - - - - 0.834 - - 0.918 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
15. pex13 ENSDARG00000071037 738 1.75 - - - - - 0.889 - - 0.861 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
16. grp ENSDARG00000043074 747 1.749 - 0.841 - - - 0.908 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
17. sema6d ENSDARG00000002748 133 1.733 - 0.813 - - - 0.920 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
18. creg2 ENSDARG00000000666 643 1.724 - 0.802 - - - - - - 0.922 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
19. mapk7 ENSDARG00000023110 455 1.724 - 0.795 - - - - - - 0.929 mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
20. slco2a1 ENSDARG00000061896 58 1.723 - 0.800 - - - 0.923 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
21. eif4e2rs1 ENSDARG00000015835 589 1.722 - 0.773 - - - 0.949 - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
22. TRIP10 TRIP10 1079 1.717 - - - - - 0.810 - - 0.907
23. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.709 - - - - - 0.915 - - 0.794 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
24. gid8b ENSDARG00000037589 2121 1.702 - - - - - 0.803 - - 0.899 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
25. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.698 - - - - - 0.883 - - 0.815 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
26. kif18a ENSDARG00000008022 546 1.689 - - - - - - 0.785 - 0.904 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
27. FUZ ENSDARG00000079730 821 1.688 - 0.867 - - - 0.821 - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
28. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.688 - - - - - 0.857 - - 0.831 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
29. ZC3H11A ENSDARG00000009754 281 1.685 - 0.766 - - - 0.919 - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
30. ZACN ZACN 502 1.684 - 0.795 - - - 0.889 - - -
31. ifrd1 ENSDARG00000068708 2858 1.682 - 0.760 - - - - - - 0.922 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
32. cdk13 ENSDARG00000076791 828 1.68 - - - 0.753 - - - - 0.927 cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
33. WAPAL_1 WAPAL_1 205 1.676 - 0.767 - - - - - - 0.909
34. NBEAL1 ENSDARG00000099547 1112 1.673 - 0.884 - - - 0.789 - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
35. lxn ENSDARG00000043102 415 1.67 - 0.750 - - - 0.920 - - - latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
36. AC024175.9 AC024175.9 56 1.667 - 0.746 - - - 0.921 - - -
37. metrnl 1042 1.664 - 0.797 - - - - - - 0.867 meteorin, glial cell differentiation regulator-like
38. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.664 - 0.770 - - - - - - 0.894 deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
39. lsm1 ENSDARG00000043177 767 1.664 - - - - - - - 0.727 0.937 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
40. CABZ01049802.1 CABZ01049802.1 195 1.655 - 0.778 - - - 0.877 - - -
41. rcbtb1 ENSDARG00000036645 255 1.649 - 0.721 - - - - - - 0.928 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
42. CCDC106 CCDC106 1908 1.649 - 0.731 - - - - - - 0.918
43. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.646 - 0.776 - - - 0.870 - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
44. spast ENSDARG00000024933 557 1.645 - 0.724 - - - - - - 0.921 spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]
45. slc16a8 ENSDARG00000045153 478 1.644 - 0.746 - - - - - - 0.898 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
46. tom1 ENSDARG00000104581 1457 1.642 - - - - - 0.819 - - 0.823 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
47. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.638 - - - - - 0.929 0.709 - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
48. dmbx1b ENSDARG00000002510 351 1.633 - - - - - - 0.729 - 0.904 diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
49. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 1.63 - - - - - 0.895 0.735 - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
50. cnot8 ENSDARG00000020043 866 1.63 - - - - - 0.895 0.735 - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
51. tspan5b ENSDARG00000070449 1056 1.629 - - - - - - 0.705 - 0.924 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
52. stra13 598 1.629 - 0.715 - - - 0.914 - - - stimulated by retinoic acid 13 homolog (mouse)
53. zc3hc1 ENSDARG00000062651 1552 1.62 0.717 - - - - 0.903 - - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
54. s100z ENSDARG00000038729 442 1.617 - 0.824 - - - 0.793 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
55. hck ENSDARG00000058647 318 1.616 - 0.702 - - - - - - 0.914 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]
56. mrpl3 ENSDARG00000103318 2308 1.614 - - - - - 0.729 - - 0.885 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
57. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.612 - 0.859 - - - 0.753 - - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
58. dscc1 ENSDARG00000019907 720 1.612 - - - 0.704 - 0.908 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
59. ppp1r12a ENSDARG00000010784 4333 1.607 - - - - - 0.879 - - 0.728 protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
60. CACUL1 ENSDARG00000021885 691 1.607 - - - - - 0.842 0.765 - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
61. CR847496.2 ENSDARG00000116070 802 1.605 - 0.714 - - - 0.891 - - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
62. irx5a ENSDARG00000034043 1694 1.602 - - - 0.716 - - - - 0.886 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
63. cdc34b ENSDARG00000012627 3879 1.597 - - - - - 0.806 - - 0.791 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
64. polr1d ENSDARG00000037570 860 1.597 - - - 0.713 - - - - 0.884 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
65. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.595 - - - - - 0.877 0.718 - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
66. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.594 - - - 0.703 - - - - 0.891 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
67. usp49 ENSDARG00000000229 706 1.59 - 0.713 - - - - - - 0.877 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
68. dgcr6 ENSDARG00000005500 479 1.59 - 0.820 - - - - 0.770 - - DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
69. kif15 ENSDARG00000012073 1936 1.588 - - - 0.731 - - - - 0.857 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
70. samm50l ENSDARG00000039681 2465 1.585 - - - - - 0.713 - - 0.872 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
71. nudt2 ENSDARG00000058728 371 1.579 - 0.772 - - - - 0.807 - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
72. slc6a13 369 1.577 - 0.730 - - - 0.847 - - - solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
73. ptprsb 1085 1.573 - - - - - - 0.757 - 0.816 protein tyrosine phosphatase, receptor type, s, b
74. CHD1 ENSDARG00000103787 1645 1.572 - - - - - - - 0.703 0.869 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
75. nrm ENSDARG00000063690 1371 1.571 - - - - - 0.853 - - 0.718 nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
76. brd3a ENSDARG00000006527 1636 1.566 - - - - - - - 0.758 0.808 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
77. orc5 ENSDARG00000021579 536 1.565 - - - 0.708 - - 0.857 - - origin recognition complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2275]
78. si:dkey-125i10.3 ENSDARG00000094760 908 1.564 - 0.787 - - - 0.777 - - - si:dkey-125i10.3 [Source:ZFIN;Acc:ZDB-GENE-060526-198]
79. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.559 - - - 0.703 - - - - 0.856 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
80. polr3glb ENSDARG00000013734 1199 1.554 0.777 0.777 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
81. 5S_rRNA_21 5S_rRNA_21 1323 1.552 - - - 0.703 - - - - 0.849
82. mad1l1 ENSDARG00000033852 464 1.549 - 0.728 - - - - 0.821 - - mitotic arrest deficient 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1081]
83. RNF157 ENSDARG00000057481 215 1.548 - 0.791 - - - - 0.757 - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
84. dvl2 ENSDARG00000056184 1525 1.547 - - - 0.746 - 0.801 - - - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
85. naprt1 naprt1 2610 1.546 - - - - - 0.750 - - 0.796
86. ENSDARG00000058255 ENSDARG00000058255 1715 1.546 - 0.837 0.709 - - - - - -
87. CEP85 ENSDARG00000060215 537 1.546 - - - 0.714 - 0.832 - - - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
88. ncalda ENSDARG00000070688 5069 1.539 - - - - - - 0.762 - 0.777 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
89. prpf4bb ENSDARG00000040310 2260 1.539 - - - - - - 0.741 - 0.798 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
90. gtf2f2a ENSDARG00000069910 1027 1.536 - - - - - 0.819 - 0.717 - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
91. fgfbp1 fgfbp1 445 1.528 - - - - - 0.811 0.717 - -
92. JHDM1D JHDM1D 2277 1.52 - 0.722 - - - - - - 0.798
93. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 1.518 - 0.741 - - - - 0.777 - - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
94. emc3 ENSDARG00000020607 3406 1.512 - - - - - 0.750 - - 0.762 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
95. asf1bb ENSDARG00000043713 2340 1.51 - - - 0.750 - 0.760 - - - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]
96. fbl ENSDARG00000053912 5891 1.51 - - - - - 0.805 - 0.705 - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
97. vezf1a ENSDARG00000008247 1449 1.503 - 0.706 - 0.797 - - - - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
98. CABZ01028296.1 CABZ01028296.1 6203 1.493 - - - - - - 0.711 - 0.782
99. amer2 ENSDARG00000075222 594 1.491 - - - 0.722 - - 0.769 - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
100. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.487 - - - 0.780 - 0.707 - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]

There are 1844 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA