Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srebf1

Gene Name Gene ID Reads Annotation
srebf1 ENSDARG00000067607 1537 sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]










Genes with expression patterns similar to srebf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srebf1 ENSDARG00000067607 1537 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
2. WAPAL_1 WAPAL_1 205 1.736 - - - - - - - 0.886 0.850
3. dmbx1b ENSDARG00000002510 351 1.719 - - - - - - - 0.845 0.874 diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
4. tmtc4 ENSDARG00000020447 873 1.675 - - - - - - - 0.805 0.870 transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
5. tubb1 ENSDARG00000053066 364 1.668 - - - - - - - 0.849 0.819 tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
6. samm50l ENSDARG00000039681 2465 1.657 - - - - - - 0.777 - 0.880 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
7. tmem63bb ENSDARG00000106631 503 1.649 - - - - - - - 0.806 0.843 transmembrane protein 63Bb [Source:NCBI gene;Acc:569678]
8. cwc22 ENSDARG00000014008 2385 1.647 - 0.795 - - - - - - 0.852 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
9. zgc:173617 zgc:173617 114 1.645 - 0.745 - - - - - 0.900 -
10. gps1 ENSDARG00000040650 3893 1.618 - - - - - - 0.741 0.877 - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
11. derl1 ENSDARG00000021905 4698 1.614 - - - - - - 0.786 - 0.828 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
12. ATP6AP1L_1 ATP6AP1L_1 508 1.612 - - - - - - - 0.776 0.836
13. CT990569.2 CT990569.2 531 1.608 - 0.801 - - - - - 0.807 -
14. hic1l ENSDARG00000045660 1489 1.606 - - - - - - 0.707 - 0.899 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
15. ddx41 666 1.604 - - - - - - - 0.781 0.823 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
16. dazap2 ENSDARG00000007867 1805 1.602 - - - - - - 0.743 - 0.859 DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
17. psmc3 ENSDARG00000007141 5592 1.595 - - - - - - 0.819 - 0.776 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
18. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.585 - 0.731 - - - - - - 0.854 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
19. araf ENSDARG00000054533 1132 1.585 - - - - - - 0.725 - 0.860 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
20. rwdd ENSDARG00000068256 964 1.583 - - - - - - - 0.782 0.801 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
21. dvl3a ENSDARG00000015707 1132 1.571 - 0.765 - - - - - - 0.806 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
22. TNRC6B ENSDARG00000074161 2464 1.561 - - - - - - 0.794 - 0.767 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
23. FNIP1 ENSDARG00000102171 1005 1.559 - 0.848 - - - - - 0.711 - folliculin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3586]
24. srpr 5148 1.558 - - - - - - 0.772 - 0.786 signal recognition particle receptor (docking protein)
25. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.553 - 0.719 - - - - - - 0.834 StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
26. cisd2 ENSDARG00000052703 2841 1.551 - 0.800 - - - - - - 0.751 CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
27. grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 1.549 - - - - - - 0.788 0.761 - glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]
28. SLC12A6 SLC12A6 883 1.543 - - - - - - 0.713 0.830 -
29. ezrb ENSDARG00000025091 2861 1.542 - - - - - - 0.718 - 0.824 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
30. slc38a5b ENSDARG00000014587 8461 1.537 - 0.824 - - - - 0.713 - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
31. tmem248 ENSDARG00000018825 1560 1.535 - 0.765 - - - - - - 0.770 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
32. bag6 ENSDARG00000075892 3782 1.534 - - - - - - 0.762 - 0.772 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
33. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.526 - 0.706 - - - - - - 0.820 WD repeat domain 44 [Source:NCBI gene;Acc:569045]
34. mrpl3 ENSDARG00000103318 2308 1.522 - - - - - - 0.724 - 0.798 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
35. hdac4 ENSDARG00000098349 1370 1.519 - 0.743 - - - - - - 0.776 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
36. b4galt6 ENSDARG00000010301 2005 1.517 - 0.769 - - - - - - 0.748 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
37. pom121 ENSDARG00000055113 1063 1.514 - 0.701 - - - - - 0.813 - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
38. ttc13 ENSDARG00000063242 1360 1.513 - - - - - - 0.720 0.793 - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
39. ybx1 ENSDARG00000004757 916 1.505 - 0.739 - - - - 0.766 - - Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]
40. zgc:158398 ENSDARG00000074226 418 1.501 - 0.711 - - - - 0.790 - - zgc:158398 [Source:ZFIN;Acc:ZDB-GENE-070820-3]
41. memo1 ENSDARG00000010823 1681 1.499 - - - - - - - 0.705 0.794 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
42. mcrs1 ENSDARG00000020840 3232 1.495 - - - - - - 0.716 - 0.779 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
43. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.494 - - - - - - 0.703 - 0.791 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
44. brd3a ENSDARG00000006527 1636 1.494 - - - - - - 0.754 - 0.740 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
45. zgc:63637 zgc:63637 3636 1.481 - - - - - - 0.735 - 0.746
46. fgfr1a ENSDARG00000011027 2705 1.479 - - - - - - 0.721 - 0.758 fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
47. GABARAP GABARAP 8341 1.479 - 0.743 - - - - 0.736 - -
48. acaa2 ENSDARG00000038881 2649 1.473 - - - - - - 0.748 - 0.725 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
49. arhgef4 ENSDARG00000012914 1464 1.47 - 0.703 - - - - - - 0.767 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
50. LAMTOR4 ENSDARG00000045542 1181 1.466 - 0.732 - - - - 0.734 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7438]
51. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 1.463 - - - - - - - 0.750 0.713 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
52. CU571336.1 ENSDARG00000099892 2164 1.462 - - - - - - 0.705 - 0.757
53. tmem2 2572 1.459 - - - - - - 0.741 - 0.718 transmembrane protein 2, transcript variant X1
54. si:dkey-19e4.5 ENSDARG00000089886 2562 1.459 - - - - - - 0.750 - 0.709 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
55. MZT1 ENSDARG00000096668 2514 1.441 - - - - - - 0.733 - 0.708 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
56. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.426 0.705 - - - - - - - 0.721 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
57. mgat5 ENSDARG00000071506 324 0.925 - - - - - - - 0.925 - alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
58. FP236810.2 ENSDARG00000113218 140 0.923 - - - - - - - 0.923 - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
59. appbp2 ENSDARG00000007566 1961 0.923 - - - - - - 0.923 - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
60. immp2l ENSDARG00000004925 215 0.92 - - - - - - - 0.920 - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
61. poc1b ENSDARG00000021110, ENSDARG00000116944 254 0.919 - - - - - - - 0.919 - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
62. ghitm 1443 0.917 - - - - - - - - 0.917 growth hormone inducible transmembrane protein
63. kcnk13a ENSDARG00000008212 136 0.915 - - - - - - - 0.915 - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
64. tmem234 ENSDARG00000078333 488 0.914 - - - - - - - 0.914 - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
65. VPRBP VPRBP 727 0.91 - - - - - - - 0.910 -
66. ZC3H12A_1 ZC3H12A_1 558 0.91 - - - - - - - 0.910 -
67. ssh2b ENSDARG00000098955 614 0.909 - - - - - - - 0.909 - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
68. ATP6AP1L ATP6AP1L 164 0.908 - - - - - - - 0.908 -
69. csrp2bp 2642 0.907 - - - - - - - 0.907 - csrp2 binding protein
70. pip5k1bb ENSDARG00000006508 2812 0.906 - - - - - - - 0.906 - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
71. si:dkey-270b7.1 si:dkey-270b7.1 83 0.906 - - - - - - - 0.906 -
72. si:dkey-220o21.5 si:dkey-220o21.5 24 0.905 - - - - - - - 0.905 -
73. CU694372.1 ENSDARG00000097988 105 0.904 - - - - - - - 0.904 -
74. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 0.904 - - - - - - - 0.904 - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
75. si:ch1073-357b18.3 si:ch1073-357b18.3 87 0.904 - - - - - - - 0.904 -
76. tfb1m ENSDARG00000040727 142 0.903 - - - - - - - 0.903 - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
77. NINJ1 ENSDARG00000103663 43 0.903 - - - - - - - 0.903 - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
78. epha6 ENSDARG00000022971 52 0.902 - - - - - - - 0.902 - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
79. csrnp1a ENSDARG00000031426 225 0.902 - - - - - - - 0.902 - cysteine-serine-rich nuclear protein 1a [Source:ZFIN;Acc:ZDB-GENE-070912-475]
80. si:ch211-71k14.1 ENSDARG00000087061 48 0.902 - - - - - - - 0.902 - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
81. si:zfos-979f1.2 ENSDARG00000011652 24 0.902 - - - - - - - 0.902 - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
82. HMGXB4_1 HMGXB4_1 1122 0.902 - - - - - - - 0.902 -
83. oprd1b ENSDARG00000037159 21 0.901 - - - - - - - 0.901 - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
84. GALNT9 ENSDARG00000006832 120 0.901 - - - - - - - 0.901 - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
85. si:ch211-198k9.10 si:ch211-198k9.10 47 0.901 - - - - - - - 0.901 -
86. spata17 ENSDARG00000054414 64 0.901 - - - - - - - 0.901 - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
87. CR391962.1 CR391962.1 31 0.9 - - - - - - - 0.900 -
88. LRRC73 ENSDARG00000063411 52 0.9 - - - - - - - 0.900 - leucine rich repeat containing 73 [Source:ZFIN;Acc:ZDB-GENE-111118-2]
89. eif2ak2 ENSDARG00000068729 184 0.9 - - - - - - - 0.900 - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
90. si:ch211-232m19.4 19 0.9 - - - - - - - 0.900 - si:ch211-232m19.4
91. CR392354.1 CR392354.1 20 0.9 - - - - - - - 0.900 -
92. agtpbp1 ENSDARG00000105214 1038 0.9 - - - - - - - 0.900 - ATP/GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-267]
93. si:dkey-117k10.8 si:dkey-117k10.8 17 0.9 - - - - - - - 0.900 -
94. si:ch211-196c10.13 ENSDARG00000096756 28 0.9 - - - - - - - 0.900 - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
95. angptl1 angptl1 82 0.9 - - - - - - - 0.900 -
96. crfb16 ENSDARG00000075181 40 0.9 - - - - - - - 0.900 - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
97. si:ch73-6k14.2 ENSDARG00000096031 16 0.9 - - - - - - - 0.900 - si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
98. crybb2 ENSDARG00000053512 15 0.9 - - - - - - - 0.900 - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
99. cpa2 ENSDARG00000010146 28 0.9 - - - - - - - 0.900 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
100. CT027623.1 ENSDARG00000094538 13 0.9 - - - - - - - 0.900 - si:dkey-65l23.1 [Source:NCBI gene;Acc:101885466]

There are 1260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA