Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srcap

Gene Name Gene ID Reads Annotation
srcap ENSDARG00000005236 1740 Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]










Genes with expression patterns similar to srcap

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srcap ENSDARG00000005236 1740 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
2. gabpb2a ENSDARG00000007943 1570 2.707 - - - - 0.993 0.873 0.841 - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
3. slc46a1 ENSDARG00000026149 297 2.652 - 0.881 - - 0.992 0.779 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
4. nfyba ENSDARG00000039185 1804 2.568 - - - - 0.978 0.851 0.739 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
5. wdr43 ENSDARG00000077264 1992 2.545 - - - - 0.995 0.836 0.714 - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
6. arglu1a ENSDARG00000019223 8716 2.514 - - - - 0.947 0.771 0.796 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
7. mllt10 ENSDARG00000045401 7557 2.447 - 0.736 - - 0.930 0.781 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
8. ahctf1 ENSDARG00000077530 2315 2.346 - - 0.831 - - 0.781 - - 0.734 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
9. stox2a ENSDARG00000070162 1620 2.304 - - - - - 0.829 0.758 - 0.717 storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
10. rcor2 ENSDARG00000008278 1678 2.245 - - 0.737 0.709 - 0.799 - - - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
11. dnal1 ENSDARG00000034042 339 2.208 0.703 - - - - 0.798 0.707 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
12. usp7 ENSDARG00000073710 7017 2.119 - - - - 0.715 - 0.702 - 0.702 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
13. BX571880.1 ENSDARG00000097533 499 1.862 - 0.881 - - 0.981 - - - -
14. hcfc1b ENSDARG00000012519 3633 1.859 - - - - 0.982 0.877 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
15. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.796 - - - - 0.992 0.804 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
16. phf2 ENSDARG00000018691 3341 1.793 - - - - 0.982 0.811 - - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
17. trim24 ENSDARG00000103350 431 1.773 - 0.782 - - 0.991 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
18. vldlr ENSDARG00000006257 772 1.763 - - - - 0.991 - 0.772 - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
19. hey1 ENSDARG00000070538 986 1.758 - - - - 0.983 0.775 - - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
20. KIF4A KIF4A 3322 1.748 - - - - 0.992 - 0.756 - -
21. ildr2 ENSDARG00000014180 791 1.744 - 0.912 - - - 0.832 - - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
22. ryk ENSDARG00000007231 1611 1.741 - - - - - 0.872 0.869 - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
23. stxbp1a ENSDARG00000001994 5154 1.728 - - - - 0.966 0.762 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
24. Sep-02 Sep-02 10074 1.721 - - - - 0.916 0.805 - - -
25. nudt3a ENSDARG00000016256 2713 1.719 - - - - 0.981 - 0.738 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
26. MARK3 MARK3 1767 1.712 - - - - 0.986 0.726 - - -
27. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.711 - - - - 0.991 0.720 - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
28. ttc27 ENSDARG00000007918 1228 1.71 - - - - 0.991 0.719 - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
29. rnd3a ENSDARG00000076799 4705 1.708 0.722 - - - 0.986 - - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
30. rfc5 ENSDARG00000035634 974 1.706 - - - - 0.993 - - 0.713 - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
31. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.698 - - - - 0.989 - 0.709 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
32. nexmifb ENSDARG00000029296 416 1.697 - 0.866 - - - 0.831 - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
33. srsf6a ENSDARG00000013729 8576 1.684 - - - - 0.892 - 0.792 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
34. CCDC71 CCDC71 2442 1.683 - - - - 0.980 - 0.703 - -
35. cltcb ENSDARG00000090716 5544 1.674 - - - - 0.968 - 0.706 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
36. anxa13l ENSDARG00000013613 631 1.674 - 0.839 - - - 0.835 - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
37. CAMK2G CAMK2G 3537 1.67 - 0.845 - - - 0.825 - - -
38. npm1b ENSDARG00000037675 5448 1.666 - - - - - 0.851 0.815 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
39. C5H3orf30 C5H3orf30 63 1.664 - 0.854 - - - 0.810 - - -
40. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.664 - - - - 0.952 - 0.712 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
41. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.663 - - - - 0.959 - 0.704 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
42. plat ENSDARG00000062707 491 1.66 - 0.829 - - - 0.831 - - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
43. flrt3 ENSDARG00000076895 3516 1.657 - - - - - 0.886 0.771 - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
44. palm1b ENSDARG00000007818 2128 1.653 - - - - - 0.918 0.735 - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
45. aip ENSDARG00000104437 3574 1.652 - - - - 0.949 - 0.703 - - aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
46. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.65 - 0.842 - - - 0.808 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
47. UBL7 UBL7 197 1.649 - 0.841 - - - 0.808 - - -
48. phf10 ENSDARG00000070084 1210 1.646 - 0.820 - - - 0.826 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
49. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.638 - - - - - 0.809 0.829 - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
50. lsm4 ENSDARG00000023852 6083 1.636 - - - - 0.932 - - - 0.704 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
51. mkrn4 ENSDARG00000028295 2768 1.632 - - - - - 0.839 - 0.793 - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
52. sumo3a ENSDARG00000028119 13447 1.621 - - - - - 0.849 0.772 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
53. kif18a ENSDARG00000008022 546 1.62 - 0.767 - - - 0.853 - - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
54. ppm1k ENSDARG00000010655 1285 1.617 - - - - - 0.798 - 0.819 - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
55. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.616 - 0.849 - - - 0.767 - - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
56. ttk ENSDARG00000041361 3911 1.615 - - - - 0.835 - 0.780 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
57. chst13 chst13 669 1.614 - 0.757 - - - 0.857 - - -
58. slc38a2 ENSDARG00000045886 2052 1.613 - 0.883 - - - 0.730 - - - solute carrier family 38, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9659]
59. SB:CB827 SB:CB827 245 1.611 - 0.765 - - - 0.846 - - -
60. SH2B2 ENSDARG00000090421 245 1.611 - 0.893 - - - 0.718 - - - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
61. abi2b ENSDARG00000014875 2259 1.61 - - - - - 0.811 0.799 - - abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
62. dnajc6 ENSDARG00000079891 438 1.609 - 0.816 - - - 0.793 - - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
63. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.608 - - - - - 0.857 0.751 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
64. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.605 - - - - - 0.852 0.753 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
65. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 1.601 - 0.797 - - - 0.804 - - -
66. si:ch211-213a13.1 ENSDARG00000090600 381 1.601 - - - - - 0.811 0.790 - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
67. bmpr2a ENSDARG00000011941 2972 1.6 - - - - - 0.889 0.711 - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
68. f2rl2 ENSDARG00000090524 37 1.599 - 0.814 - - - 0.785 - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
69. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.598 - - - - - 0.876 0.722 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
70. efnb2b_1 ENSDARG00000074050 1094 1.595 - - - - - 0.867 0.728 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
71. ppp1r15a ENSDARG00000069135 871 1.593 - - - - - 0.843 0.750 - - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
72. mex3b ENSDARG00000058369 1867 1.592 - 0.825 - - - 0.767 - - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
73. ireb2 ENSDARG00000021466 699 1.588 - 0.823 - - - 0.765 - - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
74. loh12cr1 loh12cr1 346 1.588 - 0.810 - - - 0.778 - - -
75. h2afy2_1 ENSDARG00000087897 9887 1.587 - - - - - 0.881 0.706 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
76. maml3 ENSDARG00000079552 357 1.587 - 0.846 - - - 0.741 - - - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
77. rac1 rac1 7341 1.586 - - - - - 0.818 0.768 - -
78. phldb1a ENSDARG00000061093 1637 1.586 - - - - - 0.841 0.745 - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
79. CR339053.3 CR339053.3 244 1.585 - 0.863 - - - 0.722 - - -
80. bloc1s3 ENSDARG00000068828 502 1.584 - 0.840 - - - 0.744 - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
81. BDP1_1 BDP1_1 317 1.581 - - - - - 0.870 0.711 - -
82. DENND6A DENND6A 648 1.578 - - - - - 0.854 0.724 - -
83. rbms3 ENSDARG00000044574 2514 1.574 - - - - - 0.798 0.776 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
84. pum1 ENSDARG00000099256 5017 1.568 - - - - - 0.833 0.735 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
85. dynlt1 ENSDARG00000045909 2451 1.565 - 0.844 - - - - 0.721 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
86. ubp1 ENSDARG00000018000 1047 1.565 - - - - - 0.799 0.766 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
87. sap30bp ENSDARG00000031261 1348 1.563 - - - - - 0.791 0.772 - - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
88. si:ch211-241e1.5 ENSDARG00000008906 70 1.563 - 0.797 - - - 0.766 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
89. si:ch211-282j22.3 ENSDARG00000010524 1007 1.563 - - - - - 0.808 0.755 - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
90. ctbp2 ctbp2 3255 1.557 - - - - - 0.804 0.753 - -
91. rtkn2 rtkn2 1092 1.554 - - - - - 0.735 0.819 - -
92. poglut1 ENSDARG00000053463 738 1.553 - - - - - 0.831 0.722 - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
93. irx3b ENSDARG00000031138 2538 1.549 - - - - - 0.790 0.759 - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
94. khsrp ENSDARG00000026489 15738 1.546 - - - - - 0.801 0.745 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
95. ubtf ENSDARG00000035066 4070 1.541 - - - - - 0.819 0.722 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
96. b3galt2 ENSDARG00000102061, ENSDARG00000114032 216 1.541 - 0.770 - - - 0.771 - - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2078]
97. sae1 ENSDARG00000010487 2028 1.541 - - - 0.712 - 0.829 - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
98. fam76b ENSDARG00000012432 2722 1.534 - - - - - - 0.779 - 0.755 family with sequence similarity 76, member B [Source:ZFIN;Acc:ZDB-GENE-030131-6955]
99. CASK CASK 1750 1.53 0.732 - - - - 0.798 - - -
100. apex1 ENSDARG00000045843 6345 1.528 - - 0.716 - - - 0.812 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]

There are 2455 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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