Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sra1

Gene Name Gene ID Reads Annotation
sra1 ENSDARG00000053619 2799 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]










Genes with expression patterns similar to sra1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sra1 ENSDARG00000053619 2799 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
2. nufip2 ENSDARG00000069066 3965 3.112 0.735 - 0.761 - - 0.762 - - 0.854 nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
3. si:ch211-191j22.3 ENSDARG00000095459 959 2.643 - 0.748 - - - 0.918 - - 0.977 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
4. frmd6 ENSDARG00000002332 2698 2.629 - - - - - 0.797 - 0.921 0.911 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
5. slc25a42 ENSDARG00000099368 2420 2.564 - - 0.736 - - 0.911 - 0.917 - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
6. EEF1E1 ENSDARG00000071774 3806 2.486 - - - - - 0.789 0.744 - 0.953 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
7. dbnla ENSDARG00000008170 2129 2.48 0.746 - - - 0.799 0.935 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
8. pdcd4a ENSDARG00000021702 7293 2.475 - - - - - - 0.707 0.873 0.895 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
9. gpx7 ENSDARG00000091511 3045 2.404 - 0.709 - - - 0.832 - 0.863 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
10. pfdn6 ENSDARG00000037108 2083 2.361 - 0.768 - - 0.793 - 0.800 - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
11. mrpl40 ENSDARG00000043554 2198 2.344 - - - - 0.751 0.799 - - 0.794 mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
12. ddost ENSDARG00000037318 10904 2.247 - - - - - 0.709 - 0.803 0.735 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
13. synpo2lb ENSDARG00000078696 2361 2.247 - 0.715 0.804 - - - 0.728 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
14. psmd8 ENSDARG00000020454 6645 2.245 - 0.751 - - - 0.767 0.727 - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
15. prkar1aa ENSDARG00000076128 6565 2.212 - - 0.774 - 0.724 0.714 - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
16. zgc:110655 zgc:110655 4237 2.182 - 0.741 0.723 - 0.718 - - - -
17. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.938 - - - - - 0.957 - - 0.981 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
18. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.931 - - - - - - - 0.957 0.974 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
19. commd4 ENSDARG00000061946 3281 1.894 - - - - - - - 0.918 0.976 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
20. zgc:101569 ENSDARG00000038876 1525 1.881 - - - - - 0.974 - 0.907 - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
21. ptpn23a ENSDARG00000070124 1206 1.868 - - - - - 0.897 - - 0.971 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
22. brd1b ENSDARG00000051798 1712 1.866 - - - - - 0.918 - 0.948 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
23. snap29 ENSDARG00000038518 1609 1.841 - - - - - 0.926 - 0.915 - synaptosomal-associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-041111-226]
24. brox ENSDARG00000013659 1334 1.834 - - - - - 0.907 - - 0.927 BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
25. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.817 - - - - - 0.906 - 0.911 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
26. NFATC3 NFATC3 1712 1.814 - - - - - 0.896 - 0.918 -
27. prrx1a ENSDARG00000033971 1786 1.814 - - - - 0.874 0.940 - - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
28. pi4k2b ENSDARG00000013881 1337 1.804 - - - - 0.831 - - - 0.973 phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
29. ef1 1343 1.771 - - - - - 0.794 - - 0.977 E74-like factor 1 (ets domain transcription factor), transcript variant X4
30. pvrl1b 1645 1.768 - - - - - 0.868 - 0.900 - poliovirus receptor-related 1b
31. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.757 - - - - - 0.781 - - 0.976
32. atl3 ENSDARG00000004270 2806 1.752 - - - - - 0.865 - 0.887 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
33. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.738 - - - - - 0.834 - 0.904 - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
34. wdr66 ENSDARG00000059855 276 1.737 - - 0.754 - - - - - 0.983 WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
35. fermt1 ENSDARG00000052652 2394 1.734 - - - - 0.834 - - 0.900 - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
36. zgc:100918 ENSDARG00000087243 5451 1.732 - - - - - 0.803 - - 0.929 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
37. hcls1 ENSDARG00000012729 1547 1.729 - - - - 0.818 - - 0.911 - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
38. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.718 - - - - 0.747 - - - 0.971 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
39. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.716 - - - - 0.815 - - 0.901 - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
40. PEG3_38 PEG3_38 521 1.715 - - - - 0.793 - - 0.922 -
41. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.708 - - - - 0.772 0.936 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
42. necap2 ENSDARG00000046002 4372 1.705 - - - - 0.767 - - - 0.938 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
43. map4k3a ENSDARG00000087742 771 1.703 0.725 - - - - - - - 0.978 mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
44. itpkcb ENSDARG00000067741 2370 1.702 - - - - 0.734 - - - 0.968 inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
45. fam13a ENSDARG00000075564 1905 1.702 - - - - 0.725 - - 0.977 - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
46. kpna4 ENSDARG00000023190 2505 1.699 - - - - 0.742 - - - 0.957 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
47. wwtr1 ENSDARG00000067719 3484 1.699 - - - - 0.747 - - - 0.952 WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
48. ppig ENSDARG00000044431 3427 1.699 - - - - - 0.750 - - 0.949 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
49. pacsin2 ENSDARG00000078014 1582 1.695 - - - - 0.777 - - 0.918 - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
50. C2CD2 ENSDARG00000105000 2573 1.692 - - - - 0.765 0.927 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
51. sema3gb ENSDARG00000013607 1531 1.691 - - - - 0.788 - - 0.903 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
52. slc2a15a ENSDARG00000029894 2674 1.691 - - - - - - 0.718 - 0.973 solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
53. im:7154842 im:7154842 434 1.69 - - - - 0.774 0.916 - - -
54. psmb6 ENSDARG00000002240 8015 1.689 - 0.790 - - - 0.899 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
55. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.683 - - - - 0.720 - - - 0.963 SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
56. ensab ENSDARG00000061644 2436 1.681 - - - - - 0.712 - - 0.969 endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
57. si:ch73-110p20.1 5932 1.681 - - - - - - - 0.854 0.827 si:ch73-110p20.1
58. tpd52l2b ENSDARG00000013655 9460 1.68 - - - - - - - 0.806 0.874 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
59. ncl1 2835 1.68 - - - - - - 0.716 - 0.964 nicalin, transcript variant X3
60. arhgap29b ENSDARG00000017748 812 1.677 - - 0.770 - - 0.907 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
61. snd1 ENSDARG00000006766 12906 1.675 - - - - - - - 0.800 0.875 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
62. rab35 rab35 1287 1.675 0.713 - - - - 0.962 - - -
63. TRIP10 TRIP10 1079 1.673 - - 0.745 - - 0.928 - - -
64. wasf3 wasf3 3287 1.673 - - - - 0.737 - - - 0.936
65. prickle1b ENSDARG00000045694 7536 1.672 - - 0.768 - - - - 0.904 - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
66. SCARF2 1117 1.668 - - 0.747 - - 0.921 - - - scavenger receptor class F, member 2
67. p4ha2 ENSDARG00000010085 2008 1.667 - - 0.743 - - - - - 0.924 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030827-1]
68. capns1a ENSDARG00000035329 10870 1.667 - - - - - - - 0.876 0.791 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
69. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.663 - - - - - - 0.711 - 0.952 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
70. mrpl15 ENSDARG00000101306 2796 1.662 - - - - - - 0.703 - 0.959 mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
71. dnaja2 ENSDARG00000104066 11946 1.662 - 0.817 - - - 0.845 - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
72. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.661 - 0.760 - - - - - 0.901 - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
73. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.658 - - - - - - 0.740 - 0.918 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
74. selm 2395 1.654 - - - - - - 0.740 - 0.914 selenoprotein M
75. dchs1b ENSDARG00000079850 831 1.654 - - - - 0.775 0.879 - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
76. cebpg ENSDARG00000036073 3791 1.648 - - - - - 0.754 - 0.894 - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
77. C3H16orf58 C3H16orf58 487 1.647 - - 0.742 - - 0.905 - - -
78. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.642 - - - - - - 0.776 - 0.866 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
79. bmp4 ENSDARG00000019995 2038 1.64 - - 0.782 - - - - 0.858 - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
80. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.637 - - - - - 0.775 - 0.862 - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
81. mfap2 ENSDARG00000059367 3774 1.636 - - - - - - 0.762 0.874 - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
82. s100v1 ENSDARG00000070427 6633 1.634 - - - - - 0.879 - 0.755 - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
83. si:ch73-173m3.3 si:ch73-173m3.3 425 1.632 - - 0.742 - - 0.890 - - -
84. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.629 - 0.717 - - - 0.912 - - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
85. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.628 - - 0.753 - - 0.875 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
86. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 1.628 - 0.727 - - - - - - 0.901 reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
87. si:ch211-198b3.1 si:ch211-198b3.1 765 1.628 - - - - 0.859 0.769 - - -
88. aurkaip1 ENSDARG00000074985 2214 1.627 - 0.771 0.856 - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
89. CU915738.1 CU915738.1 3723 1.627 - - - - 0.804 - - - 0.823
90. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.622 - - 0.711 - - - - 0.911 - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
91. CCK CCK 1826 1.619 - - - - - 0.853 0.766 - -
92. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.617 - - - - 0.708 - - - 0.909 Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
93. zgc:91910 ENSDARG00000035678 6172 1.612 - - - - - - 0.786 - 0.826 zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
94. tacc3 ENSDARG00000005454 2305 1.611 - - 0.724 - - 0.887 - - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
95. arpc4 ENSDARG00000054063 6150 1.61 - - 0.826 - - 0.784 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
96. inhbb ENSDARG00000040777 2141 1.606 - - 0.798 - 0.808 - - - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
97. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.593 - - 0.739 - - 0.854 - - -
98. zgc:153258 zgc:153258 868 1.592 - 0.768 - - - 0.824 - - -
99. pafah1b1b ENSDARG00000026595 1822 1.591 - - - - 0.861 0.730 - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:ZFIN;Acc:ZDB-GENE-040116-3]
100. ACTR3 ENSDARG00000091138 1739 1.588 - - 0.789 - - - - 0.799 - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]

There are 1948 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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