Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sptlc3

Gene Name Gene ID Reads Annotation
sptlc3 ENSDARG00000030743 596 serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]










Genes with expression patterns similar to sptlc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sptlc3 ENSDARG00000030743 596 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
2. slc9a2 ENSDARG00000058780 495 2.293 - 0.799 - - - 0.711 0.783 - - solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-541]
3. selo 879 2.245 - - - 0.736 - 0.712 0.797 - - selenoprotein O
4. cant1a ENSDARG00000012192 1324 1.781 - - 0.959 - - - 0.822 - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
5. ntd5 ENSDARG00000040944 4988 1.763 - - 0.906 - - - - - 0.857 ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
6. ecm2 ENSDARG00000071549 1527 1.718 - - 0.908 - - - - - 0.810 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
7. ralba ENSDARG00000040778 1574 1.714 - 0.717 0.997 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
8. CABZ01074130.1 ENSDARG00000105274 26501 1.713 0.756 - 0.957 - - - - - -
9. zgc:56585 ENSDARG00000026236 704 1.712 - - 0.988 0.724 - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
10. anapc10 ENSDARG00000090152 1406 1.71 0.732 - 0.978 - - - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
11. il17rd ENSDARG00000098359 1153 1.705 - 0.714 0.991 - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
12. bambib ENSDARG00000099677 4267 1.697 - 0.744 0.953 - - - - - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
13. zgc:92360 ENSDARG00000038151 2161 1.687 - - 0.957 - - - - - 0.730 zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
14. sirt2 ENSDARG00000011488 5389 1.673 0.759 - 0.914 - - - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
15. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.65 - 0.764 0.886 - - - - - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
16. MYO1D ENSDARG00000036863 768 1.624 - - - - - - 0.866 - 0.758 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
17. hsp70l_1 ENSDARG00000055723 72 1.614 - - - 0.762 - - - - 0.852 heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
18. serhl ENSDARG00000032340 1241 1.613 0.794 - - - - - - - 0.819 serine hydrolase-like [Source:ZFIN;Acc:ZDB-GENE-030131-1368]
19. lss ENSDARG00000061274 68 1.609 0.708 - - - - - - - 0.901 lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
20. CR376848.1 ENSDARG00000115549 149 1.602 0.813 0.789 - - - - - - - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
21. CU633775.1 ENSDARG00000113543 319 1.596 0.704 - - - - - - - 0.892
22. faxdc2 ENSDARG00000023820 260 1.577 - - - - - - 0.779 - 0.798 fatty acid hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2907]
23. spata6l ENSDARG00000004874 149 1.575 - - - - - - 0.744 - 0.831 spermatogenesis associated 6-like [Source:ZFIN;Acc:ZDB-GENE-040426-1369]
24. emilin1b ENSDARG00000026166 1530 1.575 - - - 0.832 - - 0.743 - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
25. wnt9b ENSDARG00000037889 768 1.568 - 0.779 - - - - - - 0.789 wingless-type MMTV integration site family, member 9B [Source:ZFIN;Acc:ZDB-GENE-080201-1]
26. zgc:136851 zgc:136851 315 1.567 0.781 - - 0.786 - - - - -
27. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.563 - - - 0.840 - - - - 0.723 family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
28. CEP170B ENSDARG00000074636 336 1.558 - - - 0.762 - - - - 0.796 centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
29. rock2b ENSDARG00000004877, ENSDARG00000096433 135 1.554 - - - 0.774 - - - - 0.780 rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
30. NAPA NAPA 386 1.551 - 0.784 - - - - 0.767 - -
31. hoxa9b ENSDARG00000056819 3081 1.535 - 0.784 - 0.751 - - - - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
32. ahr2 ENSDARG00000021833 762 1.533 0.727 - - - - 0.806 - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
33. zbtb8os ENSDARG00000016368 284 1.53 - - - 0.716 - - - - 0.814 zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
34. sgpl1 ENSDARG00000061375 518 1.52 - 0.805 - - - 0.715 - - - sphingosine-1-phosphate lyase 1 [Source:ZFIN;Acc:ZDB-GENE-070410-24]
35. pgrmc1 ENSDARG00000054172 5423 1.517 - - - - - - 0.722 - 0.795 progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
36. mboat2a ENSDARG00000031845 1255 1.513 - 0.701 - - - - - - 0.812 membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
37. KDELR3 ENSDARG00000040912 109 1.51 - 0.718 - - - - - - 0.792 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
38. pnck ENSDARG00000043648 114 1.51 - 0.711 - - - - 0.799 - - pregnancy up-regulated nonubiquitous CaM kinase [Source:ZFIN;Acc:ZDB-GENE-081105-127]
39. lypd6 ENSDARG00000004307 233 1.504 - 0.761 - 0.743 - - - - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
40. alkbh4 ENSDARG00000052247 306 1.502 0.782 - - 0.720 - - - - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
41. qpctla ENSDARG00000061691 869 1.496 - - - - - - 0.741 - 0.755 glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
42. prkacba ENSDARG00000001782 1340 1.496 - 0.749 - - - 0.747 - - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
43. cryzl1 ENSDARG00000026902 401 1.493 - 0.721 - - - - - - 0.772 crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
44. tmem177 ENSDARG00000069301, ENSDARG00000113926 601 1.487 - 0.778 - - - - - - 0.709 transmembrane protein 177 [Source:ZFIN;Acc:ZDB-GENE-030131-993]
45. amotl2b ENSDARG00000061948 974 1.48 - - - - - 0.744 0.736 - - angiomotin like 2b [Source:ZFIN;Acc:ZDB-GENE-061103-307]
46. si:ch211-212g7.6 ENSDARG00000079369 707 1.464 0.759 - - - - - - - 0.705 si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
47. birc7 ENSDARG00000058082, ENSDARG00000109504 299 1.463 - 0.728 - - - - 0.735 - - baculoviral IAP repeat containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-35]
48. atxn7l2b ENSDARG00000056268 226 1.463 0.736 - - 0.727 - - - - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
49. si:dkey-157l19.2 ENSDARG00000060340 635 1.45 - - - - - 0.708 0.742 - - si:dkey-157l19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-190]
50. mthfd1b ENSDARG00000040492 3784 1.448 - - - - - 0.732 0.716 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
51. LYRM9 ENSDARG00000075528 329 1.448 - - - 0.704 - - - - 0.744 LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
52. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 1.444 0.741 - - - - 0.703 - - - wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
53. zgc:158309 zgc:158309 2696 1.444 - - - - - 0.730 - - 0.714
54. CABZ01064973.1 CABZ01064973.1 160 1.441 - 0.715 - 0.726 - - - - -
55. gnmt ENSDARG00000006840 2422 1.429 - - - - - 0.717 0.712 - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
56. MTHFS ENSDARG00000104487 770 1.408 0.702 - - - - - 0.706 - - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
57. CR855996.2 ENSDARG00000104450 310 1 - - 1.000 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
58. ndufa4l2 153 1 - - 1.000 - - - - - - NDUFA4, mitochondrial complex associated like 2
59. CR382281.1 ENSDARG00000100098 135 1 - - 1.000 - - - - - -
60. si:dkey-220k22.3 ENSDARG00000094693 166 1 - - 1.000 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
61. si:ch211-173m16.2 ENSDARG00000093284 186 0.999 - - 0.999 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
62. si:dkey-54g2.6 si:dkey-54g2.6 252 0.999 - - 0.999 - - - - - -
63. c1ql3a ENSDARG00000010350 179 0.999 - - 0.999 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
64. wnt10a ENSDARG00000017155 491 0.999 - - 0.999 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
65. mxra8b ENSDARG00000062129 1004 0.999 - - 0.999 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
66. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.998 - - 0.998 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
67. ZNHIT6 ENSDARG00000095817 355 0.998 - - 0.998 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
68. tbc1d10a tbc1d10a 462 0.998 - - 0.998 - - - - - -
69. npdc1 npdc1 221 0.998 - - 0.998 - - - - - -
70. CABZ01008011.1 CABZ01008011.1 761 0.997 - - 0.997 - - - - - -
71. prdm1a ENSDARG00000002445 1340 0.997 - - 0.997 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
72. gnb1a ENSDARG00000090454 481 0.997 - - 0.997 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
73. tmco4 ENSDARG00000078924 330 0.997 - - 0.997 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
74. si:dkey-92i15.4 ENSDARG00000078387 428 0.997 - - 0.997 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
75. smpd1 ENSDARG00000076121 584 0.996 - - 0.996 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
76. mbtps2 ENSDARG00000057577 1285 0.996 - - 0.996 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
77. dnajc3 dnajc3 802 0.996 - - 0.996 - - - - - -
78. hipk3b ENSDARG00000062082 1248 0.995 - - 0.995 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
79. ppp1r14c ENSDARG00000077341 1587 0.995 - - 0.995 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
80. ercc5 ENSDARG00000023678 468 0.995 - - 0.995 - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
81. itsn1 ENSDARG00000000086 684 0.995 - - 0.995 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
82. si:ch211-250c4.3 si:ch211-250c4.3 677 0.995 - - 0.995 - - - - - -
83. sema3fb ENSDARG00000055373 834 0.995 - - 0.995 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
84. mark2a ENSDARG00000079905 1765 0.994 - - 0.994 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
85. tbc1d12a ENSDARG00000038237 698 0.994 - - 0.994 - - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
86. hint3 ENSDARG00000074286 1015 0.994 - - 0.994 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
87. GIT1 ENSDARG00000039489 1157 0.994 - - 0.994 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
88. PTDSS2 ENSDARG00000101018 881 0.994 - - 0.994 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
89. edc3 ENSDARG00000051931 780 0.994 - - 0.994 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
90. slc2a10 ENSDARG00000090820 637 0.994 - - 0.994 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
91. MAP4_1 MAP4_1 1153 0.994 - - 0.994 - - - - - -
92. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.993 - - 0.993 - - - - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
93. ehd1a ENSDARG00000098853 1092 0.992 - - 0.992 - - - - - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
94. twist3 ENSDARG00000019646 1221 0.992 - - 0.992 - - - - - - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
95. tmbim1 tmbim1 1005 0.992 - - 0.992 - - - - - -
96. BX571715.2 BX571715.2 1316 0.992 - - 0.992 - - - - - -
97. pvrl2l ENSDARG00000063390 1112 0.992 - - 0.992 - - - - - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
98. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.992 - - 0.992 - - - - - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
99. angptl2b ENSDARG00000068369 1705 0.991 - - 0.991 - - - - - - angiopoietin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050624-1]
100. stk38a ENSDARG00000019973 1343 0.99 - - 0.990 - - - - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]

There are 1015 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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