Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sptlc1

Gene Name Gene ID Reads Annotation
sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]










Genes with expression patterns similar to sptlc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
2. sptssa ENSDARG00000071203 2306 2.464 0.830 0.913 - - - - 0.721 - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
3. efna5a ENSDARG00000089790 1007 2.388 - 0.763 - - - 0.753 - - 0.872 ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
4. atpif1b 8625 2.175 - 0.705 - - - 0.703 0.767 - - ATPase inhibitory factor 1b
5. si:ch211-113e8.10 ENSDARG00000079631 498 1.832 - 0.909 - - - - - - 0.923 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
6. ckap5 ENSDARG00000102674 5068 1.804 - 0.838 - - 0.966 - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
7. ltc4s ENSDARG00000062598 138 1.783 - - - - - - - 0.862 0.921 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
8. ubr2 ENSDARG00000070164 3960 1.778 - 0.806 - - 0.972 - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
9. USP2_1 USP2_1 544 1.778 - 0.780 - - 0.998 - - - -
10. tra2a ENSDARG00000007863 4449 1.778 - - - - 0.974 - - - 0.804 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
11. cdk13 ENSDARG00000076791 828 1.765 - 0.861 - - - - - - 0.904 cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
12. dkk3b ENSDARG00000070683 209 1.753 - - - - - - - 0.831 0.922 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
13. esf1 ENSDARG00000008740 1206 1.746 - - - 0.752 0.994 - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
14. nr2f6a ENSDARG00000003607 4779 1.744 - - - - 0.856 - - - 0.888 nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
15. C6H2orf40 C6H2orf40 4224 1.739 - 0.755 - - 0.984 - - - -
16. sh3pxd2aa ENSDARG00000060148 913 1.734 - 0.805 - - - - - - 0.929 SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
17. dhrs13a.2 ENSDARG00000111240 491 1.733 - - - - - - - 0.824 0.909 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
18. CKAP2 CKAP2 930 1.721 - - - - - - 0.812 - 0.909
19. csgalnact2 ENSDARG00000061400 741 1.721 - 0.817 - - - - - - 0.904 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5186]
20. AOC3 AOC3 590 1.711 - - - 0.790 - - - - 0.921
21. spcs1 ENSDARG00000059298 5327 1.708 - - - - 0.982 - 0.726 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
22. clasp1a ENSDARG00000010280 1158 1.703 - - - - 0.995 - 0.708 - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
23. chordc1 chordc1 548 1.703 - 0.882 - - - - - 0.821 -
24. RANBP3 RANBP3 2513 1.696 - - - - 0.974 - - - 0.722
25. sqlea ENSDARG00000079946 145 1.693 0.822 - - - - - - 0.871 - squalene epoxidase a [Source:ZFIN;Acc:ZDB-GENE-071004-98]
26. tspan5b ENSDARG00000070449 1056 1.69 - 0.771 - - - - - - 0.919 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
27. MAL_1 MAL_1 200 1.673 0.791 - - - - - - 0.882 -
28. znf207a ENSDARG00000015538 2630 1.67 - - - - 0.964 - - - 0.706 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
29. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.665 - 0.828 - - - - - 0.837 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
30. prmt6 ENSDARG00000069706 484 1.66 - - - - - - - 0.736 0.924 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
31. irx1b ENSDARG00000056594 2224 1.659 - - - - 0.920 - - - 0.739 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
32. cryl1 ENSDARG00000003675, ENSDARG00000112171 1496 1.657 - 0.938 - - - - 0.719 - - crystallin, lambda 1 [Source:ZFIN;Acc:ZDB-GENE-060810-7]
33. RNF130 ENSDARG00000089767 559 1.651 - 0.836 - - - - - 0.815 - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
34. yipf2 ENSDARG00000021399 702 1.65 - - - - - - 0.722 - 0.928 Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
35. casp3b ENSDARG00000055045 54 1.648 0.802 0.846 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
36. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.621 0.726 - - - - - - - 0.895 CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
37. pspc1 ENSDARG00000006621 966 1.621 - 0.769 - - - - - - 0.852 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
38. CABZ01092303.1 CABZ01092303.1 8825 1.62 - - - - 0.899 - 0.721 - -
39. ell ENSDARG00000000568 1404 1.619 - 0.722 - - - - - - 0.897 elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
40. soul3 ENSDARG00000102257 939 1.617 0.735 0.882 - - - - - - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
41. cacng6a ENSDARG00000036457 344 1.616 0.789 0.827 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
42. ube2d2l ENSDARG00000099749 1462 1.608 - 0.756 - - - - - - 0.852 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
43. si:dkeyp-123a12.2 ENSDARG00000115029 78 1.606 0.796 0.810 - - - - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
44. cmasb 499 1.606 - 0.843 - - - - - 0.763 - cytidine monophosphate N-acetylneuraminic acid synthetase b
45. C3H17orf103 C3H17orf103 973 1.597 - 0.750 - - - - - - 0.847
46. alg9 ENSDARG00000012840 631 1.594 - 0.852 - - - - - 0.742 - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
47. KDM6B KDM6B 10265 1.59 - - - - 0.877 - - - 0.713
48. eppk1 ENSDARG00000096359 4315 1.589 - 0.878 - - - - 0.711 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
49. il17rd ENSDARG00000098359 1153 1.58 - - - - - 0.732 - 0.848 - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
50. pnpla2 ENSDARG00000089390 129 1.571 0.762 0.809 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
51. soga1 ENSDARG00000063075 1066 1.571 0.735 - - - - - - - 0.836 suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
52. slc2a10 ENSDARG00000090820 637 1.57 - 0.759 - - - - - 0.811 - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
53. ube2j2 ENSDARG00000061161 844 1.557 - 0.704 - - - - - - 0.853 ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
54. RAPGEFL1 ENSDARG00000079912 1074 1.557 0.828 0.729 - - - - - - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
55. f2rl1.2 ENSDARG00000077540 822 1.544 - - - - - - 0.727 0.817 - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
56. ARMCX3 ARMCX3 328 1.542 0.722 - - - - - - 0.820 -
57. tex261 ENSDARG00000044584 513 1.541 - 0.809 - - - - - 0.732 - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
58. proc proc 1038 1.536 0.718 0.818 - - - - - - -
59. BX511129.1 ENSDARG00000093452 340 1.525 0.784 - - - - - - 0.741 - uncharacterized LOC100535312 [Source:NCBI gene;Acc:100535312]
60. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.523 - 0.821 - - - - 0.702 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
61. tmem165 ENSDARG00000034600 1174 1.518 - 0.784 - 0.734 - - - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
62. CARD14 ENSDARG00000103485 888 1.513 - - - - - - 0.706 0.807 - caspase recruitment domain family, member 14 [Source:ZFIN;Acc:ZDB-GENE-090310-1]
63. paqr6 ENSDARG00000041483 795 1.509 0.769 - - - - - 0.740 - - progestin and adipoQ receptor family member VI [Source:ZFIN;Acc:ZDB-GENE-090714-1]
64. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.498 - - - - - - 0.770 0.728 - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
65. si:dkey-57k17.1 ENSDARG00000104697 442 1.496 0.744 - - 0.752 - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
66. mxra5a ENSDARG00000074815 628 1.495 0.723 - - - - - - 0.772 - matrix-remodelling associated 5a [Source:ZFIN;Acc:ZDB-GENE-090312-22]
67. si:ch211-51h9.7 ENSDARG00000074720 227 1.492 0.719 0.773 - - - - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
68. ecm2 ENSDARG00000071549 1527 1.471 0.702 - - - - - - 0.769 - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
69. cmc1 ENSDARG00000103670 1197 1.462 - 0.749 - - - - 0.713 - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
70. cars ENSDARG00000036164 2019 1.46 - - - - - - - 0.707 0.753 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
71. pafah1b1a ENSDARG00000032013 3183 1.46 0.754 - - - - - 0.706 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
72. CPAMD8 ENSDARG00000056530 3481 1.457 - - - 0.715 - - 0.742 - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
73. hnrnph1 ENSDARG00000040881 304 1.455 - 0.748 - - - - - 0.707 - heterogeneous nuclear ribonucleoprotein H1 [Source:ZFIN;Acc:ZDB-GENE-040426-1856]
74. fstl1a ENSDARG00000015559 1687 1.451 - - - 0.724 - - 0.727 - - follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]
75. acaa2 ENSDARG00000038881 2649 1.449 - - - - - - 0.704 - 0.745 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
76. itih5 ENSDARG00000045517 374 1.436 - - 0.730 - - - - 0.706 - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
77. LIMD2 ENSDARG00000078092 3414 1.414 - - - 0.714 - - 0.700 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
78. CABZ01027552.1 CABZ01027552.1 760 0.999 - - - - 0.999 - - - -
79. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.999 - - - - 0.999 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
80. ccdc53 982 0.998 - - - - 0.998 - - - - coiled-coil domain containing 53
81. il12rb2l ENSDARG00000074850 407 0.998 - - - - 0.998 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
82. tarsl2 ENSDARG00000092774 505 0.998 - - - - 0.998 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
83. SNORA70 SNORA70 511 0.998 - - - - 0.998 - - - -
84. atp1b4 ENSDARG00000053262 1337 0.998 - - - - 0.998 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
85. armc9 ENSDARG00000087299 459 0.998 - - - - 0.998 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
86. ticrr ENSDARG00000045605 739 0.997 - - - - 0.997 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
87. adcyap1b ENSDARG00000027740 1539 0.997 - - - - 0.997 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
88. zgc:110699 ENSDARG00000017474 381 0.997 - - - - 0.997 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
89. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.997 - - - - 0.997 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
90. si:dkey-251i10.2 ENSDARG00000093957 4424 0.997 - - - - 0.997 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
91. rnaseh1 ENSDARG00000042571 922 0.997 - - - - 0.997 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
92. USP24 ENSDARG00000059925 1294 0.997 - - - - 0.997 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
93. sh3bp5a ENSDARG00000100529 642 0.997 - - - - 0.997 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
94. rbpja ENSDARG00000003398 1309 0.997 - - - - 0.997 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
95. otx2 766 0.997 - - - - 0.997 - - - - orthodenticle homeobox 2, transcript variant X2
96. WIPF3 WIPF3 804 0.997 - - - - 0.997 - - - -
97. eif3d ENSDARG00000021257 1524 0.996 - - - - 0.996 - - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
98. slc20a1b ENSDARG00000010641 2564 0.996 - - - - 0.996 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
99. cdkn1a ENSDARG00000076554 591 0.996 - - - - 0.996 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
100. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 0.996 - - - - 0.996 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]

There are 1666 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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