Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for spsb4a

Gene Name Gene ID Reads Annotation
spsb4a ENSDARG00000016084, ENSDARG00000116235 544 splA/ryanodine receptor domain and SOCS box containing 4a [Source:ZFIN;Acc:ZDB-GENE-070911-3]










Genes with expression patterns similar to spsb4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spsb4a ENSDARG00000016084, ENSDARG00000116235 544 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splA/ryanodine receptor domain and SOCS box containing 4a [Source:ZFIN;Acc:ZDB-GENE-070911-3]
2. rxrgb ENSDARG00000004697 332 2.399 0.815 - - 0.762 0.822 - - - - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
3. CR361561.3 CR361561.3 91 1.717 0.920 - - 0.797 - - - - -
4. b3gat3 ENSDARG00000001939 58 1.609 0.848 - - 0.761 - - - - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
5. wdr54 ENSDARG00000010248 245 1.597 - 0.862 - 0.735 - - - - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
6. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.575 - - - 0.820 - - 0.755 - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
7. CBFA2T3 ENSDARG00000079012 6799 1.562 - 0.741 - - - 0.821 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
8. elavl4 ENSDARG00000045639 998 1.553 - 0.798 - - - 0.755 - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
9. dusp8a ENSDARG00000009299 1302 1.546 - - - - - - 0.766 0.780 - dual specificity phosphatase 8a [Source:ZFIN;Acc:ZDB-GENE-040426-1842]
10. her12 ENSDARG00000032963 754 1.546 0.823 - - - - - 0.723 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
11. sox14 ENSDARG00000070929 352 1.546 0.716 0.830 - - - - - - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
12. dopey1 438 1.545 0.822 - - 0.723 - - - - - dopey family member 1, transcript variant X4
13. ptprsb 1085 1.542 - - - - - 0.718 0.824 - - protein tyrosine phosphatase, receptor type, s, b
14. lhfpl4a ENSDARG00000111810 206 1.539 0.769 - - 0.770 - - - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
15. ppp1r26 ENSDARG00000102891 486 1.531 - - - 0.809 - 0.722 - - - protein phosphatase 1, regulatory subunit 26 [Source:ZFIN;Acc:ZDB-GENE-061103-607]
16. NBL1 428 1.53 - 0.793 0.737 - - - - - - neuroblastoma 1, DAN family BMP antagonist
17. map1aa ENSDARG00000059601 599 1.525 - 0.792 - - - 0.733 - - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
18. cadpsb ENSDARG00000070567 458 1.517 0.712 - - - - 0.805 - - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
19. rapgef2 ENSDARG00000005482 2586 1.515 - - - - - 0.732 0.783 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
20. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.513 - - - - - 0.717 0.796 - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
21. foxd1 ENSDARG00000029179 726 1.496 0.794 0.702 - - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
22. nefmb ENSDARG00000043697 2052 1.491 - - - - - 0.730 0.761 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
23. SPOCK1 ENSDARG00000074644 794 1.49 - - - - - 0.711 - 0.779 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
24. hoxa2b ENSDARG00000023031 706 1.486 - 0.712 - - - 0.774 - - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
25. exosc7 ENSDARG00000100060 190 1.486 - - - 0.747 - 0.739 - - - exosome component 7 [Source:ZFIN;Acc:ZDB-GENE-050417-47]
26. ROBO3_1 ROBO3_1 468 1.486 - 0.783 - - - - 0.703 - -
27. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.485 - 0.719 - - - - - 0.766 - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
28. dnajc5aa ENSDARG00000042948 2885 1.479 - - - - - 0.710 0.769 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
29. git2a ENSDARG00000061915 884 1.473 - - - - - 0.736 0.737 - - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
30. mospd1 ENSDARG00000028614, ENSDARG00000112883 697 1.471 - - - - - 0.757 - 0.714 - motile sperm domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2691]
31. si:dkey-25e11.10 si:dkey-25e11.10 955 1.47 0.744 0.726 - - - - - - -
32. mta2 ENSDARG00000013031 2932 1.461 - - - - - - 0.701 0.760 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
33. bdnf ENSDARG00000018817 193 1.461 - - - 0.760 - 0.701 - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
34. ssbp4 ENSDARG00000056483 10196 1.454 - - - - - - 0.722 0.732 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
35. sypb ENSDARG00000002230 262 1.452 - - - - - 0.748 0.704 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
36. slc8a2b ENSDARG00000100592 598 1.445 - - - - - 0.742 0.703 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
37. nell2b ENSDARG00000062797 854 1.443 - - - - - - 0.702 0.741 - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
38. amer2 ENSDARG00000075222 594 1.439 - - - - - 0.716 0.723 - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
39. scn8aa ENSDARG00000005775 792 1.434 - - - 0.721 - - 0.713 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
40. prdm13 ENSDARG00000078701 205 1.42 - - - - - 0.718 - - 0.702 PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
41. dpysl5a ENSDARG00000011141 1827 1.418 0.710 - - - - - 0.708 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
42. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 1.415 - - - - - 0.706 0.709 - - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
43. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.411 - - - - 0.708 0.703 - - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
44. syngr3a ENSDARG00000014871 405 1.41 - - - - - 0.706 0.704 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
45. pcnxl2 610 0.915 - - - - - 0.915 - - - pecanex-like 2 (Drosophila), transcript variant X2
46. si:dkey-256i11.2 ENSDARG00000093713 102 0.914 - 0.914 - - - - - - - si:dkey-256i11.2 [Source:ZFIN;Acc:ZDB-GENE-110913-47]
47. SMOC1 ENSDARG00000088255 507 0.907 - 0.907 - - - - - - - SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
48. C13H10orf54 C13H10orf54 450 0.898 0.898 - - - - - - - -
49. GEMIN6 ENSDARG00000105394 130 0.898 0.898 - - - - - - - - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
50. CNTNAP3 ENSDARG00000067824 25 0.898 0.898 - - - - - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
51. C25H15orf27 C25H15orf27 69 0.898 0.898 - - - - - - - -
52. ITCH_1 ITCH_1 2 0.898 0.898 - - - - - - - -
53. gfra3 ENSDARG00000087704 122 0.887 0.887 - - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
54. ing1 ENSDARG00000019116 394 0.887 - 0.887 - - - - - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
55. si:dkey-187a12.4 127 0.887 0.887 - - - - - - - - si:dkey-187a12.4
56. rgs17 ENSDARG00000039435 590 0.881 - - - - - 0.881 - - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
57. heca ENSDARG00000042877 200 0.88 - 0.880 - - - - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
58. hecw1 hecw1 241 0.88 0.880 - - - - - - - -
59. commd5 ENSDARG00000029660 517 0.87 - - - - - 0.870 - - - COMM domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040801-71]
60. nup155 ENSDARG00000001777 3417 0.866 - - - - - - 0.866 - - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
61. ankhd1 ENSDARG00000077860 5510 0.855 - - - - - - 0.855 - - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
62. si:dkey-10f21.16 si:dkey-10f21.16 252 0.854 - 0.854 - - - - - - -
63. CBLC ENSDARG00000078217 96 0.852 0.852 - - - - - - - - Cbl proto-oncogene C, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-080220-20]
64. mafb ENSDARG00000076520 139 0.85 - 0.850 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
65. scocb ENSDARG00000002217 1844 0.85 - - - - - - 0.850 - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
66. cyb561d1 ENSDARG00000055295, ENSDARG00000114150 124 0.848 0.848 - - - - - - - - cytochrome b561 family, member D1 [Source:ZFIN;Acc:ZDB-GENE-040912-157]
67. PRRT2 ENSDARG00000103588 913 0.848 - 0.848 - - - - - - - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
68. fam58a 423 0.846 - - - 0.846 - - - - - family with sequence similarity 58, member A, transcript variant X1
69. TESK1_1 TESK1_1 276 0.845 0.845 - - - - - - - -
70. adck3 83 0.844 - 0.844 - - - - - - - aarF domain containing kinase 3
71. rpap2 ENSDARG00000038397 118 0.844 - 0.844 - - - - - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
72. nkd3 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 2 0.844 - 0.844 - - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
73. si:ch211-137i24.12 ENSDARG00000094537 35 0.843 - 0.843 - - - - - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
74. ube2r2 ENSDARG00000058740 83 0.843 - 0.843 - - - - - - - ubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
75. FBXO38 ENSDARG00000006924 307 0.842 - 0.842 - - - - - - - F-box protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-2797]
76. atp6ap1a ENSDARG00000041417 898 0.841 - - - - - - 0.841 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
77. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 0.841 - 0.841 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
78. cstf1 ENSDARG00000044820 1663 0.839 - - - - - - 0.839 - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
79. DHRS7C DHRS7C 363 0.838 - 0.838 - - - - - - -
80. BX323459.1 ENSDARG00000109508 1476 0.838 - 0.838 - - - - - - -
81. b3galnt2 ENSDARG00000046133 68 0.837 - 0.837 - - - - - - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
82. smad3b ENSDARG00000010207 951 0.836 - - - 0.836 - - - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
83. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 0.833 - - - - - - 0.833 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
84. si:dkey-78p8.2 si:dkey-78p8.2 205 0.833 - 0.833 - - - - - - -
85. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 0.832 - 0.832 - - - - - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
86. si:dkey-156k2.6 si:dkey-156k2.6 848 0.832 0.832 - - - - - - - -
87. si:dkey-199m13.7 ENSDARG00000099837, ENSDARG00000111824 22 0.83 - 0.830 - - - - - - - si:dkey-199m13.7 [Source:ZFIN;Acc:ZDB-GENE-110914-26]
88. xkr6 xkr6 286 0.83 - 0.830 - - - - - - -
89. si:ch211-93g21.2 ENSDARG00000092842 56 0.83 - 0.830 - - - - - - - si:ch211-93g21.2 [Source:ZFIN;Acc:ZDB-GENE-060503-799]
90. PFKFB2 PFKFB2 105 0.83 - 0.830 - - - - - - -
91. morn2 ENSDARG00000071360 44 0.83 - 0.830 - - - - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
92. TKT TKT 298 0.83 - 0.830 - - - - - - -
93. TRIM14_9 TRIM14_9 5 0.83 - 0.830 - - - - - - -
94. si:ch211-222k6.1 20 0.83 - 0.830 - - - - - - - si:ch211-222k6.1, transcript variant X6
95. isl2b ENSDARG00000053499 132 0.83 - 0.830 - - - - - - - ISL LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-990415-133]
96. C1S_1 C1S_1 11 0.83 - 0.830 - - - - - - -
97. si:dkey-203c4.2 si:dkey-203c4.2 4 0.83 - 0.830 - - - - - - -
98. slc6a6b ENSDARG00000098438 7 0.83 - 0.830 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
99. mb21d2b mb21d2b 84 0.83 - 0.830 - - - - - - -
100. nr4a2a ENSDARG00000017007 140 0.83 - 0.830 - - - - - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]

There are 856 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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