Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sprn2

Gene Name Gene ID Reads Annotation
sprn2 ENSDARG00000057665, ENSDARG00000115640 69 shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]










Genes with expression patterns similar to sprn2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
2. TENM2 ENSDARG00000037122 48 2.554 0.741 1.000 - - - - - 0.813 - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
3. grm2a ENSDARG00000004150 64 2.482 - 1.000 0.736 - - 0.746 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
4. foxg1d ENSDARG00000070053 32 2.48 - 1.000 - 0.742 - - - 0.738 - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
5. FUT9 FUT9 91 2.466 0.854 - - - - 0.902 - 0.710 -
6. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.372 - 0.822 - - - - - 0.823 0.727 zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
7. dlx1a ENSDARG00000013125 142 2.356 - - 0.817 0.784 - - - 0.755 - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
8. pcp4l1 ENSDARG00000023181 117 2.23 - 0.731 0.768 0.731 - - - - - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
9. XKR7 ENSDARG00000026333 175 2 1.000 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
10. si:dkey-165i8.5 si:dkey-165i8.5 21 1.866 1.000 - - - - 0.866 - - -
11. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.854 0.854 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
12. si:dkey-4j21.1 17 1.854 0.854 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
13. si:ch211-10j20.7 si:ch211-10j20.7 8 1.854 0.854 1.000 - - - - - - -
14. BX548021.2 BX548021.2 4 1.854 0.854 1.000 - - - - - - -
15. lppr5b lppr5b 23 1.854 0.854 1.000 - - - - - - -
16. si:dkey-56m15.4 si:dkey-56m15.4 39 1.854 0.854 1.000 - - - - - - -
17. CABZ01065506.1 CABZ01065506.1 204 1.854 0.854 1.000 - - - - - - -
18. PGBD4 ENSDARG00000079328 20 1.854 0.854 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
19. LRP3 ENSDARG00000008485 1401 1.852 - 1.000 - - - 0.852 - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
20. zgc:194665 ENSDARG00000004577 136 1.845 0.845 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
21. PPFIA3 ENSDARG00000077053 310 1.84 0.840 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
22. si:dkey-287f10.2 si:dkey-287f10.2 3 1.822 - 1.000 0.822 - - - - - -
23. pcsk5a ENSDARG00000067537 44 1.822 - 1.000 0.822 - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
24. GADD45G GADD45G 382 1.811 0.811 1.000 - - - - - - -
25. evlb ENSDARG00000099720 245 1.807 - 1.000 - 0.807 - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
26. zgc:195633 19 1.806 - 1.000 - - 0.806 - - - - zgc:195633
27. fabp10a ENSDARG00000038439 4 1.804 - 1.000 - - - 0.804 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
28. ppp1r3db ENSDARG00000076248 32 1.804 - 1.000 - - - 0.804 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
29. NACC1 NACC1 9 1.788 - 1.000 0.788 - - - - - -
30. sprn ENSDARG00000056004 128 1.777 - 1.000 - - - - - 0.777 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
31. crygm2d10 ENSDARG00000087765 358 1.768 - 1.000 - - - - - - 0.768 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
32. si:dkey-247i3.1 ENSDARG00000076252 11 1.768 - 1.000 0.768 - - - - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
33. KCNJ3 KCNJ3 24 1.764 1.000 - - 0.764 - - - - -
34. ggt1a ENSDARG00000023526 26 1.752 - 1.000 - - - - - - 0.752 gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
35. helt ENSDARG00000056400 482 1.75 0.854 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
36. si:dkey-103d23.5 26 1.746 1.000 - - - - 0.746 - - - si:dkey-103d23.5
37. CU695076.1 CU695076.1 7 1.742 - 1.000 - - - 0.742 - - -
38. KCNJ6 ENSDARG00000058985 71 1.741 0.741 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
39. si:ch73-49p17.1 69 1.737 - 1.000 - 0.737 - - - - - si:ch73-49p17.1
40. cnn1b ENSDARG00000102398 40 1.737 0.854 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
41. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.737 0.737 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
42. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.726 - 1.000 - - - - - 0.726 - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
43. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.725 0.725 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
44. si:ch73-290k24.5 ENSDARG00000076310 39 1.72 - 1.000 0.720 - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
45. CABZ01053592.1 ENSDARG00000117388 6 1.676 0.854 - 0.822 - - - - - -
46. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.663 - - 0.775 0.888 - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
47. chst2b ENSDARG00000058585 33 1.658 0.854 - - - - 0.804 - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
48. VASH1 ENSDARG00000092716 33 1.658 0.854 - - - - 0.804 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
49. APEH ENSDARG00000008703 73 1.655 - 0.731 - - - 0.924 - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
50. scn1bb ENSDARG00000105003 239 1.653 0.887 0.766 - - - - - - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
51. CABZ01029822.1 ENSDARG00000086931 1654 1.635 0.839 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
52. PPP1R3E PPP1R3E 340 1.621 0.802 - - - - 0.819 - - -
53. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1.619 0.854 - - - - 0.765 - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
54. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.607 - - - - - 0.864 - 0.743 - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
55. si:ch73-29c22.1 ENSDARG00000090948 5 1.605 0.854 - - - - - - - 0.751 si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
56. nrg2b ENSDARG00000086585 100 1.6 0.869 - - - 0.731 - - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
57. glcea ENSDARG00000005095 33 1.599 - - - - - 0.813 - 0.786 - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
58. GABRA3 ENSDARG00000090883 5 1.589 - - 0.822 - - - - - 0.767 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
59. CSMD1 CSMD1 15 1.585 0.854 0.731 - - - - - - -
60. lppr4a lppr4a 141 1.578 0.854 - - - - - - 0.724 -
61. si:dkey-13m3.2 ENSDARG00000103424 15 1.575 - - 0.822 - - - - - 0.753 si:dkey-13m3.2 [Source:ZFIN;Acc:ZDB-GENE-121214-42]
62. cacng3b ENSDARG00000076401 91 1.574 0.858 - - - - 0.716 - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
63. six3b ENSDARG00000054879 2416 1.573 - - - 0.839 - - - 0.734 - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
64. CABZ01076817.1 CABZ01076817.1 4 1.573 0.854 - 0.719 - - - - - -
65. si:ch211-161n3.5 ENSDARG00000095981 1 1.571 - - - - - 0.804 - - 0.767 si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
66. si:ch211-119d14.3 ENSDARG00000075332 12 1.571 - - - - - 0.804 - - 0.767 si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
67. zfpm2b ENSDARG00000100560 125 1.571 - - - - - 0.852 - 0.719 - zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
68. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.569 - - - - - 0.804 - - 0.765 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
69. cxxc4 ENSDARG00000077817 197 1.568 - - 0.754 - - - - 0.814 - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
70. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.568 - - 0.822 - - 0.746 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
71. rtn4r ENSDARG00000090035 46 1.563 0.854 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
72. si:ch211-190k17.31 si:ch211-190k17.31 29 1.561 - 0.818 - 0.743 - - - - -
73. ptprc ENSDARG00000071437 104 1.558 0.854 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
74. CR848045.1 CR848045.1 459 1.554 0.781 - - - - 0.773 - - -
75. hcrt ENSDARG00000070932 4 1.549 - - 0.796 - - - - - 0.753 hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
76. HTR7 17 1.54 - - 0.822 0.718 - - - - - 5-hydroxytryptamine receptor 7
77. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.538 0.784 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
78. fmn2b ENSDARG00000061778 179 1.537 0.823 - - - - 0.714 - - - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
79. SLC16A1 SLC16A1 37 1.535 - 0.731 - - - 0.804 - - -
80. zgc:194659 ENSDARG00000079347 17 1.535 - 0.713 0.822 - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
81. syt12 ENSDARG00000101776 215 1.534 - 0.713 - - - 0.821 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
82. dlg4 88 1.529 - - 0.782 - - 0.747 - - - discs large MAGUK scaffold protein 4, transcript variant X5
83. CCDC88A_1 CCDC88A_1 12 1.527 - - - - - 0.804 - - 0.723
84. cnih3 ENSDARG00000014953 25 1.527 0.796 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
85. pou4f2 ENSDARG00000069737 451 1.521 0.805 - - - - - - 0.716 - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
86. zgc:113336 ENSDARG00000104078 147 1.519 0.785 - - - - 0.734 - - - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
87. celf4 ENSDARG00000070045 1537 1.518 - - 0.745 - - - - 0.773 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
88. SNORD88 SNORD88 232 1.517 - 0.713 - - - 0.804 - - -
89. thsd7ba ENSDARG00000095022 231 1.517 - 0.770 - 0.747 - - - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
90. nkx2.1a nkx2.1a 156 1.49 - - 0.715 0.775 - - - - -
91. MCF2L2 ENSDARG00000079742 52 1.466 0.754 - - - - 0.712 - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
92. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.465 0.701 - - - - - - 0.764 - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
93. scn1lab ENSDARG00000062744 155 1.459 - 0.731 - - - - - 0.728 - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
94. sox21b ENSDARG00000008540 1460 1.458 0.727 0.731 - - - - - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
95. BX324132.5 BX324132.5 115 1.456 - - 0.723 - - - - 0.733 -
96. lss ENSDARG00000061274 68 1.437 - 0.713 - 0.724 - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
97. syngr3b ENSDARG00000025034 290 1.426 0.707 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
98. zgc:171531 zgc:171531 77 1.42 - - 0.707 0.713 - - - - -
99. gdf11 ENSDARG00000044924 534 1.419 - 0.713 - - - 0.706 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
100. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]

There are 1341 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA