Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for spred3

Gene Name Gene ID Reads Annotation
spred3 ENSDARG00000040358 134 sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]










Genes with expression patterns similar to spred3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spred3 ENSDARG00000040358 134 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
2. fbxo41 ENSDARG00000078908 95 2.572 - 1.000 - - - 0.794 0.778 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
3. Mar-09 Mar-09 126 2.572 - 1.000 - - - 0.866 0.706 - -
4. sprn ENSDARG00000056004 128 2.544 - 1.000 - - - - 0.834 0.710 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
5. zgc:194665 ENSDARG00000004577 136 2.534 - 1.000 - - - 0.773 0.761 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
6. gpr22 gpr22 115 2.435 - 1.000 - - - 0.733 0.702 - -
7. gdf11 ENSDARG00000044924 534 2.434 - 0.713 - - - 0.820 0.901 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
8. nell2b ENSDARG00000062797 854 2.401 - 0.950 - - - - 0.727 0.724 - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
9. faxcb ENSDARG00000078981 249 2.351 - 0.818 - - - 0.790 0.743 - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
10. tbc1d25 ENSDARG00000075333 126 2.277 0.728 - 0.804 - - - 0.745 - - TBC1 domain family, member 25 [Source:ZFIN;Acc:ZDB-GENE-041111-25]
11. ELMO1 ENSDARG00000098753 114 2.213 0.728 - - - - 0.765 - 0.720 - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
12. nitr3a_1 ENSDARG00000110676 44 1.921 - 1.000 - - - 0.921 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
13. vwc2 ENSDARG00000076495 22 1.921 - 1.000 - - - 0.921 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
14. si:ch73-346o4.3 si:ch73-346o4.3 29 1.921 - 1.000 - - - 0.921 - - -
15. gpr88 24 1.921 - 1.000 - - - 0.921 - - - G protein-coupled receptor 88
16. evlb ENSDARG00000099720 245 1.886 - 1.000 - - - - 0.886 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
17. olfm2a ENSDARG00000077847 230 1.876 - - - - - 0.941 0.935 - - olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]
18. KCNA2 KCNA2 66 1.826 - 1.000 - - - - 0.826 - -
19. fstl5 ENSDARG00000040198 213 1.782 - 1.000 - - - 0.782 - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
20. grm2a ENSDARG00000004150 64 1.779 - 1.000 - - - - 0.779 - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
21. GADD45G GADD45G 382 1.77 - 1.000 - - - - 0.770 - -
22. bsk146 ENSDARG00000099069 274 1.759 - 1.000 - - - - 0.759 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
23. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.75 - 1.000 - - - - 0.750 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
24. adora1 adora1 149 1.745 - 1.000 - - - 0.745 - - -
25. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.741 - 1.000 - - - - 0.741 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
26. camsap1a ENSDARG00000019208 137 1.736 - - - - - 0.812 0.924 - - calmodulin regulated spectrin-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-060518-4]
27. CR556708.1 ENSDARG00000100565 6 1.728 0.728 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
28. eif2b5 ENSDARG00000074995 8 1.728 0.728 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
29. rnf213b ENSDARG00000103551 63 1.728 0.728 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
30. CABZ01083834.1 CABZ01083834.1 38 1.725 0.804 - - - - 0.921 - - -
31. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.718 - 1.000 - - - - 0.718 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
32. slc12a5b ENSDARG00000078187 329 1.716 - 1.000 - - - - 0.716 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
33. KCNIP4 ENSDARG00000088100 86 1.715 - 1.000 - - - - 0.715 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
34. nmnat2 ENSDARG00000004580 370 1.715 - 0.948 - - - - 0.767 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
35. her4.4 ENSDARG00000009822 50 1.713 - - - - - 0.713 1.000 - - hairy-related 4, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-081031-104]
36. olig3 ENSDARG00000074253 84 1.711 - 1.000 - - - 0.711 - - - oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
37. sall3b ENSDARG00000057586 982 1.679 - 0.920 - - - - 0.759 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
38. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.649 0.728 - - - - 0.921 - - -
39. LRRK1_1 LRRK1_1 11 1.649 0.728 - - - - 0.921 - - -
40. mdm1 ENSDARG00000045675 64 1.634 - 0.713 - - - 0.921 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
41. tmem229b ENSDARG00000060569 516 1.632 - - - - - 0.876 0.756 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
42. si:ch211-260c23.1 13 1.631 - - - - - 0.921 0.710 - - si:ch211-260c23.1, transcript variant X7
43. si:ch211-208k15.1 ENSDARG00000088650 11 1.627 - - - - - 0.921 0.706 - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
44. foxb1a ENSDARG00000089042 101 1.625 - 0.704 - - - 0.921 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
45. elavl4 ENSDARG00000045639 998 1.622 - - - - - 0.829 0.793 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
46. cadpsb ENSDARG00000070567 458 1.61 - 0.896 - - - - 0.714 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
47. lrrc4.2 ENSDARG00000003020 235 1.61 - 0.908 - - - - 0.702 - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
48. dfnb31a 166 1.595 - 0.817 - - - 0.778 - - - deafness, autosomal recessive 31a, transcript variant X3
49. pou3f2a ENSDARG00000070220 817 1.591 - - - - - 0.869 - 0.722 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
50. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.59 - - - - - 0.757 0.833 - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
51. FGFBP3 FGFBP3 993 1.586 - - - - - 0.859 0.727 - -
52. nbeaa ENSDARG00000070080 862 1.582 - - - - - 0.831 0.751 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
53. SYT2 ENSDARG00000014169 265 1.58 - - - - - 0.789 0.791 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
54. syngr3b ENSDARG00000025034 290 1.577 - 0.719 - - - - 0.858 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
55. clstn1 ENSDARG00000031720 5286 1.568 - - - - - 0.741 0.827 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
56. mnx2a ENSDARG00000042106 939 1.566 - 0.813 - - - - 0.753 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
57. cers6 ENSDARG00000053583 247 1.563 - 0.754 - - - - 0.809 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
58. lrrc4.1 ENSDARG00000069402 323 1.557 - 0.704 - - - - 0.853 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
59. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.554 - - - - - 0.785 0.769 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
60. THEM6 ENSDARG00000103914 49 1.55 - - - - - 0.808 0.742 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
61. hoxa2b ENSDARG00000023031 706 1.544 - - - - - 0.815 0.729 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
62. thsd7a thsd7a 194 1.534 - 0.751 - - - - 0.783 - -
63. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.533 - - - - - - 0.800 0.733 - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
64. fam49a ENSDARG00000006672 939 1.532 - 0.731 - - - 0.801 - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
65. DHX32 DHX32 181 1.53 - - - - - 0.796 - - 0.734
66. BAI1 BAI1 173 1.527 - 0.713 - - - - 0.814 - -
67. nr0b1 ENSDARG00000056541 35 1.523 0.792 0.731 - - - - - - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
68. dscamb ENSDARG00000028118 82 1.518 - - - - - 0.810 - - 0.708 Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
69. rfx1a ENSDARG00000005883 148 1.515 0.723 - - - - - 0.792 - - regulatory factor X, 1a (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-070424-94]
70. gpsm1a ENSDARG00000092517 784 1.512 - - 0.772 - - - - 0.740 - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
71. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.509 - - - - - - 0.758 0.751 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
72. mb21d2a mb21d2a 421 1.506 - - - - - 0.725 0.781 - -
73. pdzd4 175 1.504 - - - - - 0.758 0.746 - - PDZ domain containing 4, transcript variant X2
74. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.501 - 0.754 - - - - 0.747 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
75. CABZ01111990.1 CABZ01111990.1 4374 1.501 - - - - - - 0.763 0.738 -
76. SPAG1 SPAG1 44 1.5 0.744 0.756 - - - - - - -
77. dpysl5a ENSDARG00000011141 1827 1.498 - 0.797 - - - - 0.701 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
78. her4.3 ENSDARG00000070770 613 1.496 - - - - - - 0.776 0.720 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
79. dbx2 2971 1.496 - - - - - 0.786 0.710 - - developing brain homeobox 2
80. lzts3b ENSDARG00000058558 166 1.495 - - - - - 0.734 0.761 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
81. dnajc5aa ENSDARG00000042948 2885 1.492 - - - - - 0.732 0.760 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
82. neflb ENSDARG00000012426 298 1.492 - - - - - 0.755 0.737 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
83. ADAM22 ENSDARG00000060532 2259 1.489 - - - - - - 0.753 0.736 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
84. sox21b ENSDARG00000008540 1460 1.489 - 0.731 - - - - 0.758 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
85. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.488 - - - - - 0.730 0.758 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
86. serp2 ENSDARG00000094003 64 1.488 - - - - - 0.740 - 0.748 - stress-associated endoplasmic reticulum protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-081104-143]
87. her2 ENSDARG00000038205 3219 1.484 - - - - - 0.742 0.742 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
88. cspg5a ENSDARG00000069981 1699 1.483 - - - - - 0.766 0.717 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
89. dpysl4 ENSDARG00000103490 534 1.48 - - - - - - 0.724 0.756 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
90. scn1lab ENSDARG00000062744 155 1.471 - 0.731 - - - - 0.740 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
91. zgc:162331 ENSDARG00000069607 13 1.47 - - - - - 0.764 0.706 - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
92. nubpl ENSDARG00000054821 232 1.469 - 0.744 0.725 - - - - - - nucleotide binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040718-140]
93. scube2 ENSDARG00000037362 2833 1.468 - - - - - 0.707 0.761 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
94. SPOCK1 ENSDARG00000074644 794 1.465 - - - - - 0.725 0.740 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
95. C8H1orf106 C8H1orf106 2690 1.463 - - - - - 0.737 0.726 - -
96. mllt11 ENSDARG00000071026 2518 1.461 - - - - - - 0.761 0.700 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
97. fabp7a ENSDARG00000007697 5211 1.46 - - - - - 0.725 0.735 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
98. clvs2 ENSDARG00000053122 1390 1.458 - - - - - - 0.722 0.736 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
99. pcp4b 1080 1.457 - - - - - 0.748 0.709 - - Purkinje cell protein 4b
100. cdk5r1b ENSDARG00000045087 2075 1.457 - - - - - 0.719 0.738 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]

There are 1482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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