Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spred1

Gene Name Gene ID Reads Annotation
spred1 ENSDARG00000041449, ENSDARG00000117025 1124 sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]










Genes with expression patterns similar to spred1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
2. prpf31 ENSDARG00000095904 526 2.547 - - - 0.783 - 0.839 - 0.925 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
3. xylt1 ENSDARG00000061248 2357 2.466 - - - - - 0.817 0.782 0.867 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
4. palm1b ENSDARG00000007818 2128 1.834 - - - - - 0.912 - 0.922 - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
5. plat ENSDARG00000062707 491 1.832 - - - - - 0.914 - 0.918 - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
6. ek1 ENSDARG00000020080 742 1.827 - - - - - 0.899 - 0.928 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
7. atcaya ENSDARG00000071678 344 1.82 - - - - - 0.897 - 0.923 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
8. RNF5 ENSDARG00000075606 1730 1.819 - - - - - 0.909 - 0.910 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
9. asnsd1 830 1.786 - - - - - 0.862 - 0.924 - asparagine synthetase domain containing 1, transcript variant X1
10. si:dkey-180p18.9 381 1.771 - - - - - 0.875 - 0.896 - si:dkey-180p18.9
11. nexmifb ENSDARG00000029296 416 1.771 - - - - - 0.868 - 0.903 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
12. phf10 ENSDARG00000070084 1210 1.77 - - - - - 0.852 - 0.918 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
13. unc119b ENSDARG00000044362 1528 1.768 - - - - - 0.882 - 0.886 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
14. bcl9 ENSDARG00000036687 1124 1.767 - - - - - 0.842 - 0.925 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
15. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.766 - - - - - 0.906 - 0.860 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
16. sp1 ENSDARG00000088347 1697 1.762 - - - - - 0.843 - 0.919 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
17. smcr8a ENSDARG00000052818 559 1.758 - - - - - 0.834 - 0.924 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
18. gabpb2a ENSDARG00000007943 1570 1.758 - - - - - 0.953 - 0.805 - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
19. iah1 ENSDARG00000015765 326 1.757 - - - 0.802 - 0.955 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
20. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 1.748 - - - - - 0.829 - 0.919 - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
21. CABZ01072954.1 CABZ01072954.1 2330 1.713 - - - - - 0.817 - 0.896 -
22. CYTH2 ENSDARG00000028800 2349 1.712 - - - - - 0.777 - 0.935 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
23. tubgcp2 ENSDARG00000013079 1520 1.701 - - - - - 0.768 - 0.933 - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
24. ap2b1 ENSDARG00000035152 2912 1.693 - - - - - 0.808 - 0.885 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
25. kif5aa ENSDARG00000098936 2428 1.687 - - - - - 0.736 - 0.951 - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
26. her15.2 her15.2 1701 1.681 - - - - - 0.902 - 0.779 -
27. sppl2 ENSDARG00000030448 1040 1.655 - - - - - 0.813 - 0.842 - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
28. irx5a ENSDARG00000034043 1694 1.647 - - - - - 0.743 - 0.904 - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
29. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.643 - - - 0.716 - - - 0.927 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
30. rab23 ENSDARG00000004151 1077 1.642 - - - - - 0.723 - 0.919 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
31. nfyba ENSDARG00000039185 1804 1.634 0.726 - - - - 0.908 - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
32. vps36 ENSDARG00000057021 636 1.629 - 0.708 - - - - - 0.921 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
33. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.621 - 0.703 - - - - - 0.918 - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
34. sf1 ENSDARG00000008188 5142 1.62 - - - - - 0.796 - 0.824 - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
35. dek ENSDARG00000070108 2262 1.611 - 0.709 - - - - - 0.902 - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
36. gle1 ENSDARG00000043559 1362 1.598 - - - - - 0.821 - 0.777 - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
37. dlg5a ENSDARG00000074059 1834 1.596 - - 0.712 - - - - 0.884 - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
38. fzd7b ENSDARG00000027589 2562 1.588 - - - - - 0.765 - 0.823 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
39. tet2 ENSDARG00000076928 2190 1.582 - 0.764 - - - 0.818 - - - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
40. usf1 ENSDARG00000041689 1619 1.578 - - - 0.723 - - - 0.855 - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
41. WDFY3 ENSDARG00000078890 2092 1.576 - 0.707 - - - 0.869 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
42. CR387996.1 ENSDARG00000097774 3037 1.57 - - - - - 0.804 0.766 - -
43. memo1 ENSDARG00000010823 1681 1.565 - - - 0.716 - 0.849 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
44. si:ch211-212k5.1 ENSDARG00000110637 337 1.537 - - - - - 0.775 0.762 - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
45. SYMPK ENSDARG00000059553 1159 1.527 - 0.736 - - - 0.791 - - - symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
46. slc7a6os ENSDARG00000010596 1599 1.523 - - - 0.776 - 0.747 - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
47. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.511 - - - 0.716 - 0.795 - - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
48. gon4l ENSDARG00000005867 982 1.501 - - - - - 0.731 0.770 - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
49. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.498 0.754 - - - - 0.744 - - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
50. zcchc10 ENSDARG00000091092 1333 1.496 - 0.710 - - - 0.786 - - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
51. arpp19b ENSDARG00000039880 4823 1.492 - - - - - - 0.704 0.788 - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
52. chmp7 ENSDARG00000041362 831 1.486 - - - - - 0.756 0.730 - - charged multivesicular body protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1750]
53. lrrc47 ENSDARG00000053138 417 1.485 - - - 0.701 - 0.784 - - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
54. gbp ENSDARG00000040059 1939 1.475 - 0.744 - 0.731 - - - - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
55. klhdc10 ENSDARG00000007764 529 1.467 0.767 - - - - 0.700 - - - kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
56. opa1_1 ENSDARG00000070801 1424 1.465 - 0.702 - - - 0.763 - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
57. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 1.451 0.736 - - 0.715 - - - - - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
58. zgc:113348 ENSDARG00000103795 1351 1.444 - - - 0.715 - 0.729 - - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
59. TNKS TNKS 2775 1.435 - 0.718 - - - 0.717 - - -
60. tbcc ENSDARG00000022918 386 0.983 - - - - - - - 0.983 - tubulin folding cofactor C [Source:ZFIN;Acc:ZDB-GENE-041008-103]
61. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 0.982 - - - - - - - 0.982 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
62. dbnlb ENSDARG00000016016 1412 0.976 - - - - - - - 0.976 - drebrin-like b [Source:ZFIN;Acc:ZDB-GENE-050522-293]
63. asic1a ENSDARG00000008329 347 0.972 - - - - - - - 0.972 - acid-sensing (proton-gated) ion channel 1a [Source:ZFIN;Acc:ZDB-GENE-040513-2]
64. ZBTB39 ENSDARG00000019265 687 0.966 - - - - - - - 0.966 - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]
65. ppp1r7 ENSDARG00000009740 2606 0.966 - - - - - - - 0.966 - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
66. vrk1 ENSDARG00000018006 1759 0.962 - - - - - - - 0.962 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
67. tial1 ENSDARG00000009525 1856 0.961 - - - - - - - 0.961 - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
68. seh1l ENSDARG00000004280 2915 0.96 - - - - - - - 0.960 - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
69. SCML2 ENSDARG00000012949 1310 0.956 - - - - - - - 0.956 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
70. hmbsb ENSDARG00000055991 3037 0.954 - - - - - - - 0.954 - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
71. fem1b ENSDARG00000062636 474 0.951 - - - - - 0.951 - - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
72. pacsin1b ENSDARG00000042128 1051 0.95 - - - - - - - 0.950 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
73. hiat1b ENSDARG00000043055 757 0.948 - - - - - 0.948 - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
74. grik4 ENSDARG00000026753 22 0.946 - - - - - 0.946 - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
75. ppp2r2ba 321 0.945 - - - - - 0.945 - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
76. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 0.945 - - - - - 0.945 - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
77. atat1 ENSDARG00000004472 700 0.945 - - - - - 0.945 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
78. RAPH1 RAPH1 294 0.944 - - - - - 0.944 - - -
79. atpv0e2 ENSDARG00000059057 585 0.944 - - - - - 0.944 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
80. kif3cb ENSDARG00000079500 935 0.944 - - - - - 0.944 - - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
81. slc25a23b ENSDARG00000024708 51 0.943 - - - - - 0.943 - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
82. gpr155b ENSDARG00000071086 54 0.943 - - - - - 0.943 - - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
83. KCNJ3_1 KCNJ3_1 30 0.942 - - - - - 0.942 - - -
84. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 0.942 - - - - - 0.942 - - - novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
85. mir124-3 26 0.942 - - - - - 0.942 - - - microRNA 124-3
86. slc8a4a ENSDARG00000055154 90 0.941 - - - - - 0.941 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
87. ksr2 ENSDARG00000094526 134 0.941 - - - - - 0.941 - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
88. BX323449.2 BX323449.2 50 0.941 - - - - - 0.941 - - -
89. nrn1b ENSDARG00000042656 44 0.941 - - - - - 0.941 - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
90. si:dkey-51d8.11 8 0.941 - - - - - 0.941 - - - si:dkey-51d8.11, transcript variant X6
91. exoc2 ENSDARG00000055610, ENSDARG00000109455 950 0.941 - - - - - - - 0.941 - exocyst complex component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1160]
92. gng2_1 ENSDARG00000056831 113 0.941 - - - - - 0.941 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
93. CCDC134 CCDC134 477 0.941 - - - - - - - 0.941 -
94. ENSDARG00000086878 ENSDARG00000086878 332 0.941 - - - - - 0.941 - - -
95. BX004890.2 BX004890.2 84 0.941 - - - - - 0.941 - - -
96. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.941 - - - - - 0.941 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
97. si:dkey-22o22.2 ENSDARG00000102445 149 0.94 - - - - - 0.940 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
98. CNTNAP1 ENSDARG00000074524 73 0.94 - - - - - 0.940 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
99. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.94 - - - - - 0.940 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
100. sf3b3_1 ENSDARG00000103553 1191 0.94 - - - - - 0.940 - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]

There are 1657 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA