Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spock3

Gene Name Gene ID Reads Annotation
spock3 ENSDARG00000070266, ENSDARG00000110158 934 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]










Genes with expression patterns similar to spock3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spock3 ENSDARG00000070266, ENSDARG00000110158 934 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
2. ccdc85ca ENSDARG00000005232 3218 3.15 0.762 0.767 - - - 0.801 0.820 - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
3. nefmb ENSDARG00000043697 2052 3.099 0.825 0.748 - - - 0.749 0.777 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
4. nrxn2a ENSDARG00000061454 291 3.076 0.765 - - - - 0.824 0.769 0.718 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
5. fyna ENSDARG00000011370 1679 3.044 0.750 - - - - 0.750 0.802 0.742 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
6. gfap ENSDARG00000025301 5584 2.707 0.901 - - - - 0.943 0.863 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
7. tuba1c ENSDARG00000055216 8384 2.674 0.895 - - - - 0.919 0.860 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
8. amph ENSDARG00000007663 599 2.659 0.865 - - - - 0.910 0.884 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
9. gap43 ENSDARG00000099744 4114 2.639 0.829 - - - - 0.914 0.896 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
10. plp1a ENSDARG00000103732 3544 2.637 0.896 - - - - 0.929 0.812 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
11. olfm1b ENSDARG00000014053 1392 2.632 0.885 - - - - 0.868 0.879 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
12. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.625 0.898 - - - - 0.895 0.832 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
13. scrt2 ENSDARG00000056175 4331 2.621 0.803 - - - - 0.945 0.873 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
14. STMN3 ENSDARG00000038465 1009 2.615 0.829 - - - - 0.905 0.881 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
15. sncgb ENSDARG00000109715 1014 2.613 0.831 - - - - 0.923 0.859 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
16. rab3ab ENSDARG00000043835 1267 2.611 0.800 - - - - 0.938 0.873 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
17. prdm12b ENSDARG00000007430 914 2.608 0.822 - - - - 0.910 0.876 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
18. mapk12b ENSDARG00000006409 2246 2.597 0.806 - - - - 0.926 0.865 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
19. stmn2a ENSDARG00000033234 2272 2.596 0.781 - - - - 0.895 0.920 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
20. atp6v0cb ENSDARG00000036577 3472 2.593 0.834 - - - - 0.897 0.862 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
21. snap25a ENSDARG00000020609 4537 2.593 0.837 - - - - 0.932 0.824 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
22. MAP1A MAP1A 847 2.592 0.797 - - - - 0.936 0.859 - -
23. ROBO3_1 ROBO3_1 468 2.589 0.814 - - - - 0.907 0.868 - -
24. syt11a ENSDARG00000057913 1145 2.589 0.895 - - - - 0.905 0.789 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
25. stx1b ENSDARG00000000503 2724 2.588 0.784 - - - - 0.925 0.879 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
26. prrt1 ENSDARG00000062208 368 2.581 0.882 - - - - 0.917 0.782 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
27. tox ENSDARG00000032317 9126 2.581 0.903 - - - - 0.832 0.846 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
28. stmn1b ENSDARG00000033655 9491 2.58 0.852 - - - - 0.885 0.843 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
29. hmp19 2554 2.57 0.866 - - - - 0.903 0.801 - - HMP19 protein
30. fez1 ENSDARG00000023174 701 2.57 0.792 - - - - 0.938 0.840 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
31. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.569 0.866 - - - - 0.832 0.871 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
32. si:ch73-21g5.7 ENSDARG00000093156 9412 2.567 0.805 - - - - 0.901 0.861 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
33. scn8aa ENSDARG00000005775 792 2.566 0.815 - - - - 0.879 0.872 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
34. nova2 ENSDARG00000017673 7685 2.561 0.845 - - - - 0.889 0.827 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
35. eno2 ENSDARG00000014287 2162 2.56 0.832 - - - - 0.931 0.797 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
36. mllt11 ENSDARG00000071026 2518 2.559 0.887 - - - - 0.920 0.752 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
37. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.559 0.845 - - - - 0.851 0.863 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
38. slc17a6b ENSDARG00000041150 823 2.558 0.855 - - - - 0.852 0.851 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
39. TUBB8P7_1 TUBB8P7_1 2722 2.553 0.839 - - - - 0.904 0.810 - -
40. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.548 0.727 - - - - 0.944 0.877 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
41. nrarpb ENSDARG00000018958 6225 2.547 0.837 - - - - 0.879 0.831 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
42. hmgb3a ENSDARG00000056725 15668 2.547 0.814 - - - - 0.876 0.857 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
43. SPOCK1 ENSDARG00000074644 794 2.543 0.924 - - - - 0.791 0.828 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
44. EFCC1 ENSDARG00000077826 1359 2.542 0.856 - - - - 0.910 0.776 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
45. stmn2b ENSDARG00000070537 1586 2.539 0.864 - - - - 0.889 0.786 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
46. pax6a ENSDARG00000103379 3061 2.539 0.793 - - - - 0.861 0.885 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
47. nadl1.1 1200 2.533 0.868 - - - - 0.855 0.810 - - neural adhesion molecule L1.1, transcript variant X1
48. BX957337.1 BX957337.1 1685 2.527 0.744 - - - - 0.940 0.843 - -
49. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.522 0.786 - - - - 0.904 0.832 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
50. nbeaa ENSDARG00000070080 862 2.52 0.928 - - - - 0.735 0.857 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
51. TUBA1A ENSDARG00000001889 25294 2.52 0.736 - - - - 0.950 0.834 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
52. kcnc3a ENSDARG00000055855 1821 2.518 0.764 - - - - 0.890 0.864 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
53. lhx1a ENSDARG00000014018 958 2.513 0.891 - - - - 0.795 0.827 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
54. nes ENSDARG00000088805 2710 2.512 0.889 - - - - 0.831 0.792 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
55. MAPK8IP1_1 MAPK8IP1_1 186 2.508 0.871 - - - - 0.800 0.837 - -
56. dpysl3 ENSDARG00000002587 4381 2.507 0.815 - - - - 0.839 0.853 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
57. rbfox3 rbfox3 1443 2.503 0.837 - - - - 0.783 0.883 - -
58. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.503 0.794 - - - - 0.818 0.891 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
59. pcsk1nl ENSDARG00000076170 1232 2.502 0.791 - - - - 0.892 0.819 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
60. hmgb1b ENSDARG00000030479 10398 2.501 0.772 - - - - 0.901 0.828 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
61. vsnl1a ENSDARG00000023228 1584 2.498 0.816 - - - - 0.896 0.786 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
62. CACFD1 ENSDARG00000090818 1298 2.497 - - - - - 0.853 0.820 0.824 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
63. slc32a1 ENSDARG00000059775 1092 2.497 0.736 - - - - 0.895 0.866 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
64. nell2b ENSDARG00000062797 854 2.496 0.818 - - - - 0.811 0.867 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
65. clstn3 ENSDARG00000073883 590 2.496 0.781 - - - - 0.829 0.886 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
66. dbx1a ENSDARG00000086393 3161 2.496 0.843 - - - - 0.794 0.859 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
67. epha4b ENSDARG00000011600 3110 2.495 0.830 - - - - 0.819 0.846 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
68. C19H7orf41 C19H7orf41 2243 2.493 0.721 - - - - 0.867 0.905 - -
69. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.492 0.828 - - - - 0.916 0.748 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
70. pcdh1gc5 ENSDARG00000104826 10052 2.491 0.740 - - - - 0.936 0.815 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
71. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.486 0.760 - - - - 0.865 0.861 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
72. slc1a2b ENSDARG00000102453 3136 2.484 0.748 - - - - 0.873 0.863 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
73. SEZ6 SEZ6 262 2.484 0.859 - - - - 0.769 0.856 - -
74. CT030046.1 CT030046.1 190 2.483 0.934 - - - - 0.824 0.725 - -
75. myt1b ENSDARG00000102879 5411 2.482 0.725 - - - - 0.937 0.820 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
76. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.481 0.783 - - - - 0.864 0.834 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
77. ckbb ENSDARG00000043257 3503 2.479 0.773 - - - - 0.891 0.815 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
78. map7d2a ENSDARG00000068480 513 2.479 0.808 - - - - 0.840 0.831 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
79. nrn1a ENSDARG00000071860 1311 2.478 0.758 - - - - 0.916 0.804 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
80. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.476 0.768 - - - - 0.822 0.886 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
81. SEMA7A ENSDARG00000078707 465 2.473 0.726 - - - - 0.934 0.813 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
82. irx1b ENSDARG00000056594 2224 2.471 0.798 - - - - 0.851 0.822 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
83. rtn1b ENSDARG00000021143 1682 2.463 0.772 - - - - 0.900 0.791 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
84. vim ENSDARG00000010008 3551 2.462 0.829 0.766 - - - 0.867 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
85. TUSC5 TUSC5 1436 2.46 0.711 - - - - 0.879 0.870 - -
86. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.458 0.724 - - - - 0.886 0.848 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
87. slc1a3a ENSDARG00000104431 9888 2.453 0.782 - - - - 0.918 0.753 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
88. grin1a ENSDARG00000027828 1327 2.451 0.780 - - - - 0.799 0.872 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
89. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.449 0.764 - - - - 0.928 0.757 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
90. slc18a3a ENSDARG00000006356 1285 2.448 0.714 - - - - 0.888 0.846 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
91. cnrip1a ENSDARG00000091683 1491 2.446 0.749 - - - - 0.840 0.857 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
92. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.445 0.715 - - - - 0.892 0.838 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
93. dpysl5a ENSDARG00000011141 1827 2.443 0.723 - - - - 0.833 0.887 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
94. mdkb ENSDARG00000020708 5393 2.442 0.774 - - - - 0.880 0.788 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
95. CABZ01111990.1 CABZ01111990.1 4374 2.438 0.862 - - - - 0.711 0.865 - -
96. si:ch211-278j3.3 ENSDARG00000020284 478 2.435 - - - 0.715 - 0.903 0.817 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
97. pax3a ENSDARG00000010192 626 2.434 0.730 - - - - 0.868 0.836 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
98. hoxc4a ENSDARG00000070338 1382 2.432 0.803 - - - - 0.876 0.753 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
99. AGO1 ENSDARG00000092644 4521 2.43 0.765 - - - - 0.819 0.846 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
100. atp6v0a2a ENSDARG00000035538 278 2.428 0.750 - - - - 0.841 0.837 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]

There are 2357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA