Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spo11

Gene Name Gene ID Reads Annotation
spo11 ENSDARG00000013837 7 SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]










Genes with expression patterns similar to spo11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spo11 ENSDARG00000013837 7 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
2. ms4a17a.1 ENSDARG00000043798 7 2.662 - - - 0.782 - - 0.880 1.000 - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
3. MAP1S MAP1S 123 2.316 - 0.788 - - 0.798 0.730 - - -
4. tecpr1a ENSDARG00000062515 7 2 - - - - - 1.000 - 1.000 - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
5. trhra ENSDARG00000076546 3 2 - - - - - 1.000 - 1.000 - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
6. fgf10b ENSDARG00000100475 17 2 - 1.000 - - - - - - 1.000 fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
7. si:ch211-113a14.15_1 2 2 - - - - - - 1.000 1.000 - si:ch211-113a14.15
8. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 2 - 1.000 - - - - 1.000 - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
9. ebi3 ENSDARG00000053620 5 2 - 1.000 - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
10. si:ch73-44m9.1 ENSDARG00000077115 3 2 - 1.000 1.000 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
11. MFAP4_4 MFAP4_4 9 2 - 1.000 - - - 1.000 - - -
12. si:dkey-54j5.1 si:dkey-54j5.1 4 2 - - - - - - - 1.000 1.000
13. cyp39a1 ENSDARG00000017982 4 2 - - - - - 1.000 - - 1.000 cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
14. si:ch73-155e10.1 si:ch73-155e10.1 13 2 - - - - - 1.000 - - 1.000
15. si:ch73-381a20.2 si:ch73-381a20.2 11 2 - 1.000 - - - - - - 1.000
16. BX649417.1 ENSDARG00000117387 1 2 - 1.000 - - - 1.000 - - -
17. MPZL2 MPZL2 31 2 - 1.000 - - - - - - 1.000
18. si:ch211-196n4.9 si:ch211-196n4.9 1 2 - 1.000 - - - - - - 1.000
19. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 2 - 1.000 - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
20. inpp5jb ENSDARG00000093359 4 1.969 - - - - 0.969 - - 1.000 - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
21. svilb_1 ENSDARG00000014651 60 1.909 - 1.000 - - 0.909 - - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
22. hsd17b2 ENSDARG00000045553 14 1.906 - - - - 0.906 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
23. cdk5r2b ENSDARG00000078671 20 1.843 - - 0.843 - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
24. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.838 - 1.000 - - - 0.838 - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
25. grk7b ENSDARG00000055534 17 1.819 - - 0.952 - - - - - 0.867 G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
26. TMPRSS7 5 1.815 - 1.000 - - - - - 0.815 - transmembrane protease, serine 7
27. CR942805.1 CR942805.1 94 1.815 - 0.815 - - - - 1.000 - -
28. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.812 - - - - - - - 0.971 0.841 dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
29. nr5a1b ENSDARG00000023362 54 1.799 - - - - - 1.000 0.799 - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
30. si:dkey-258p11.3 si:dkey-258p11.3 9 1.788 - 0.788 - - 1.000 - - - -
31. si:dkey-267i17.3 si:dkey-267i17.3 4 1.782 - - 0.960 - 0.822 - - - -
32. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1.782 - - 0.848 - 0.934 - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
33. PRDM12 PRDM12 133 1.773 - - - - - 1.000 - 0.773 -
34. rapgef5b ENSDARG00000074307 112 1.757 - 1.000 - - - 0.757 - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
35. rtel1 ENSDARG00000035074 17 1.757 - - - - - 0.866 - - 0.891 regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
36. ryr2b ENSDARG00000003706 6 1.753 - - - - - - - 1.000 0.753 ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
37. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1.751 - - 0.751 - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
38. fam5ca fam5ca 76 1.744 - 0.829 - - - 0.915 - - -
39. AL935293.1 AL935293.1 2 1.742 - - - 0.742 - - - 1.000 -
40. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1.739 - - 0.739 - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
41. SNORA81_1 SNORA81_1 8 1.72 - - - - 0.720 - 1.000 - -
42. lsm14b ENSDARG00000025386 23 1.71 - 1.000 - - 0.710 - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
43. TENM2 ENSDARG00000037122 48 1.708 - - 0.708 - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
44. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.706 - - - - - - - 0.904 0.802 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
45. CABZ01079241.1 ENSDARG00000098424 88 1.703 - - 0.747 - - 0.956 - - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
46. gnai3 ENSDARG00000030644 29 1.686 - 0.815 - - - 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
47. vmhc 234 1.677 - - - - - - - 0.827 0.850 ventricular myosin heavy chain
48. si:dkey-4m13.3 6 1.667 - - 0.885 0.782 - - - - - si:dkey-4m13.3
49. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1.658 - - 0.931 - - - - - 0.727 tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
50. diaph3 ENSDARG00000090785 16 1.641 - 0.829 0.812 - - - - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
51. ntng1a ENSDARG00000014973 23 1.632 - - - - 0.783 0.849 - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
52. si:dkey-19f21.8 si:dkey-19f21.8 12 1.61 - - 0.774 - - - 0.836 - -
53. zgc:174224_2 ENSDARG00000093875 22 1.6 - - - - - 0.849 0.751 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
54. tnnc1a ENSDARG00000011400 165 1.591 - - - - - - - 0.789 0.802 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
55. cmlc1 ENSDARG00000032976 455 1.586 - - - - - - - 0.832 0.754 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
56. tectb ENSDARG00000045268 3 1.574 - - - - - - - 0.798 0.776 tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
57. AL935200.4 AL935200.4 3 1.574 - - - - - - - 0.847 0.727
58. lgals3bpb ENSDARG00000040528 32 1.57 - - 0.772 - - - 0.798 - - lectin, galactoside-binding, soluble, 3 binding protein b [Source:ZFIN;Acc:ZDB-GENE-040426-2262]
59. myo18ab ENSDARG00000061862 124 1.564 - 0.726 - - - 0.838 - - - myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
60. adprhl1 ENSDARG00000041589 34 1.551 - - - - - - - 0.798 0.753 ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
61. CR974475.2 CR974475.2 38 1.548 - - - - 0.766 0.782 - - -
62. tnnt2a ENSDARG00000020610 313 1.547 - - - - - - - 0.737 0.810 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
63. zgc:174260 ENSDARG00000091800, ENSDARG00000116307 10 1.546 - 0.829 0.717 - - - - - - zgc:174260 [Source:ZFIN;Acc:ZDB-GENE-080213-9]
64. pcloa ENSDARG00000063299 353 1.527 - 0.759 - - - 0.768 - - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
65. si:dkey-79c1.1 ENSDARG00000093179 11 1.51 - 0.808 - - - - - - 0.702 si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
66. GRM5_1 GRM5_1 18 1.504 - - 0.750 0.754 - - - - -
67. MEOX2 MEOX2 63 1.502 - - - - 0.703 - 0.799 - -
68. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
69. SNTG1 ENSDARG00000061832 0 1 - - - - - - - - 1.000 syntrophin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-140106-77]
70. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
71. rictora ENSDARG00000100867 20 1 - 1.000 - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
72. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
73. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
74. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
75. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -
76. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
77. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - - - - - - 1.000 - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
78. sim1b ENSDARG00000013789 47 1 - - - - - - 1.000 - - SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]
79. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
80. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
81. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
82. si:dkey-28i19.2 si:dkey-28i19.2 1 1 - - - - 1.000 - - - -
83. si:ch211-117m20.4 ENSDARG00000094286 7 1 - 1.000 - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
84. si:ch211-134d5.3 si:ch211-134d5.3 1 1 - 1.000 - - - - - - -
85. CABZ01070007.1 CABZ01070007.1 5 1 - 1.000 - - - - - - -
86. USF2 ENSDARG00000020228 3 1 - - - - - 1.000 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
87. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
88. DKK3 DKK3 12 1 - - - - - 1.000 - - -
89. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
90. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
91. TRIM14_5 TRIM14_5 2 1 - - 1.000 - - - - - -
92. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
93. CU459094.1 ENSDARG00000110517 17 1 - - - - - - - 1.000 - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
94. SNTB2 ENSDARG00000051763 2 1 - 1.000 - - - - - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
95. CABZ01049025.1 CABZ01049025.1 1 1 - - - - - - - 1.000 -
96. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
97. mir124-1 10 1 - - - - - 1.000 - - - microRNA 124-1
98. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
99. NWD1 ENSDARG00000076110 3 1 - - - - - - - - 1.000 NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
100. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - - - - 1.000 - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]

There are 1124 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA