Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spire2

Gene Name Gene ID Reads Annotation
spire2 ENSDARG00000003084 6 spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]










Genes with expression patterns similar to spire2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spire2 ENSDARG00000003084 6 5 1.000 - 1.000 1.000 - 1.000 - - 1.000 spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
2. col17a1b ENSDARG00000079011 143 1.895 1.000 - 0.895 - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
3. zgc:92249 14 1.756 - - 0.897 0.859 - - - - - zgc:92249
4. ncs1b ENSDARG00000054186 252 1.71 - - 0.934 - - 0.776 - - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
5. CU459084.1 CU459084.1 4 1.693 0.759 - 0.934 - - - - - -
6. zgc:136902 zgc:136902 4 1.629 - - 0.732 0.897 - - - - -
7. ppm1lb ENSDARG00000089641 26 1.604 - - 0.836 - - - - - 0.768 protein phosphatase, Mg2+/Mn2+ dependent, 1Lb [Source:ZFIN;Acc:ZDB-GENE-060929-136]
8. cpne5 cpne5 16 1.6 - - 0.727 - - - - - 0.873
9. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1.564 0.805 - - - - 0.759 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
10. ADAMTS15_1 ADAMTS15_1 11 1.481 - - 0.722 - - 0.759 - - -
11. ela3l ENSDARG00000007276 11 1.477 - - - 0.738 - - - - 0.739 elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
12. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
13. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
14. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
15. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 1.000 - - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
16. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
17. bon bon 20 1 1.000 - - - - - - - -
18. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - - 1.000 - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
19. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
20. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
21. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
22. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
23. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
24. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
25. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
26. CR936442.1 ENSDARG00000105592 2 1 - - - - - 1.000 - - -
27. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
28. SCN1B SCN1B 191 1 1.000 - - - - - - - -
29. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
30. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
31. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 1.000 - - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
32. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
33. DSN1 ENSDARG00000089922 269 1 - - - - - 1.000 - - - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
34. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
35. iffo1a ENSDARG00000062976 5 1 1.000 - - - - - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
36. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
37. PAMR1 ENSDARG00000093480 40 1 1.000 - - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
38. snoU13 snoU13 2 1 1.000 - - - - - - - -
39. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
40. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
41. hsd11b2 ENSDARG00000001975 245 1 1.000 - - - - - - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
42. hmha1 hmha1 58 1 1.000 - - - - - - - -
43. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
44. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
45. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
46. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
47. sostdc1a ENSDARG00000068892 127 1 1.000 - - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
48. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
49. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
50. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
51. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
52. asb13a.1 ENSDARG00000079698, ENSDARG00000109650 19 1 - - - - - 1.000 - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-261]
53. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
54. GRID1 GRID1 51 1 1.000 - - - - - - - -
55. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
56. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
57. GPC6_1 GPC6_1 34 1 1.000 - - - - - - - -
58. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
59. glipr1b ENSDARG00000030078 73 1 1.000 - - - - - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
60. calcr ENSDARG00000028845, ENSDARG00000109526 17 1 1.000 - - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
61. si:dkey-242e21.3 ENSDARG00000075723 77 1 1.000 - - - - - - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
62. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
63. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 1.000 - - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
64. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
65. ATP13A5 ATP13A5 13 1 1.000 - - - - - - - -
66. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
67. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
68. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
69. BX510934.1 ENSDARG00000087544 140 1 - - - - - 1.000 - - -
70. cx31.7 ENSDARG00000058064 8 1 - - - - - 1.000 - - - connexin 31.7 [Source:ZFIN;Acc:ZDB-GENE-050616-3]
71. CCDC106_1 CCDC106_1 1 1 1.000 - - - - - - - -
72. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
73. angptl1 angptl1 82 1 1.000 - - - - - - - -
74. CABZ01030429.1 CABZ01030429.1 1 1 1.000 - - - - - - - -
75. cox5aa ENSDARG00000088383 21 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
76. ttr ENSDARG00000037191 11 1 1.000 - - - - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
77. si:dkey-24l11.3 si:dkey-24l11.3 9 1 1.000 - - - - - - - -
78. DPYSL2 DPYSL2 4 1 1.000 - - - - - - - -
79. dnaaf2 ENSDARG00000103132 24 1 1.000 - - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
80. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
81. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
82. egr2b ENSDARG00000042826 94 1 - - - - - 1.000 - - - early growth response 2b [Source:ZFIN;Acc:ZDB-GENE-980526-283]
83. si:dkey-188k17.2 7 1 1.000 - - - - - - - - si:dkey-188k17.2
84. si:dkey-88j15.3 ENSDARG00000076573 1 1 1.000 - - - - - - - - si:dkey-88j15.3 [Source:ZFIN;Acc:ZDB-GENE-100922-28]
85. FAT1 FAT1 689 1 1.000 - - - - - - - -
86. ankrd1b ENSDARG00000076192 204 1 1.000 - - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
87. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
88. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
89. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
90. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
91. si:dkey-47k16.4_1 ENSDARG00000113005 5 1 1.000 - - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
92. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
93. si:dkey-111e8.5 ENSDARG00000093960 28 1 1.000 - - - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
94. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
95. BX465205.1 ENSDARG00000097139 64 1 1.000 - - - - - - - -
96. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
97. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
98. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
99. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
100. chia.4 ENSDARG00000008541 14 0.994 - - - - - - - - 0.994 chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]

There are 427 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA